- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C3.491.v4....'
Transcript Model
Transcript Id
KH2012:KH.C3.491.v4.C.ND3-1
Possible name(s)
AC068533.4; CRCP; FBXO41
Gene model
Location
KhC3 [3,847,035 / 3,857,499]
Amino acid sequence
Length: 805
>KH.C3.491.v4.C.ND3-1
MLHEIAVAMNKLHEINADQRLLHCDLKPCNILLDIDLHAHVRLKFRCRGKVVSTSACNPE
VMGSRFVVATPLFSILAWELLAREIPYRDEERKIAVFQKWKEIDPNPTVRNLIQKLRQIK
VDIDSKLYEMEVTNKCSAMLSNMEVLNILNEYANEQKLSKNKNSRNNQNLSTITYETIKY
LSETPAGLQNQACIETTLKALLPFGLTKAEKLQLVNLRPTTAVEISLIVEESEERITEEQ
IDEIIEIVMYYSSEDMLPYRCPSCGSSKRFRSLVALRMHMSIIHDISTGNNGNLTNESTD
LLEKSETEGPERVKVGTIEDVPSSNAVDAIFNKYSGRMDNILGKYDRYLHNTLKTKQIAN
RIKMAKQLEQIKQQKRDLNMIRTNWETVHGLSQLVEETDMLINSRPDKSSPNPPLHSTSN
LSPQSSLPQPHTSSHAPQDDYLLRRQVDAGVALAAKYKTLAIEAEHKLQEKIEEEHHMKQ
FIQVVANKERHAKKKLSELLEEILERAETAEQQLEDISSRSVYFIGPRAPKQPGVETKVA
TTSFASDRRVVLFCIFSRMRNVDLLSMALVCREWRDVARHSQLWSRIRFDNLRMEGKLLK
RISEWSSETCYLHLHNISLLPSNMDAPDTETGCLEEGLEMILKRCGDKLLVLAIDRCDPV
ITSRVMWLVSCYNRKIRNIVYRSSIDPLCHQVGWSLGSACRDIVSLEVAPVQPCPVPGMF
DNNVARLLSWCWPQLQALSFGGINIDGAGLISVGRFFKITVLVYYCLFYCNTPLMPNFYY
ILTLPHHAGINNYHLFITFENHTKI
Nucleotide sequence
Length: 2,418
>KH2012:KH.C3.491.v4.C.ND3-1
ATGCTGCACGAAATAGCAGTTGCAATGAACAAGTTGCACGAGATAAATGCGGATCAAAGA
TTGTTGCATTGTGACCTGAAGCCTTGCAATATTTTACTTGATATAGATCTTCATGCACAT
GTAAGGTTAAAGTTTCGGTGCCGTGGCAAAGTGGTTAGCACGTCTGCCTGTAACCCAGAG
GTAATGGGGTCAAGATTCGTCGTAGCTACACCACTTTTCTCCATTCTTGCTTGGGAATTA
CTTGCTCGTGAGATACCTTACAGAGATGAAGAAAGAAAAATAGCTGTGTTTCAAAAATGG
AAAGAAATAGACCCAAATCCAACAGTCCGTAACCTTATCCAAAAACTGCGCCAAATCAAA
GTTGATATTGACTCTAAACTGTACGAAATGGAAGTAACCAATAAGTGTTCTGCTATGTTA
AGTAATATGGAAGTTCTGAACATTTTAAACGAATACGCAAACGAGCAAAAGCTGAGCAAG
AACAAGAACTCAAGGAATAACCAGAACTTATCGACAATAACGTATGAAACAATTAAGTAT
CTTTCTGAGACACCAGCAGGGTTACAGAACCAGGCGTGCATAGAAACAACTTTGAAAGCG
CTTTTGCCGTTTGGTTTAACCAAAGCTGAAAAGCTACAGTTGGTAAACCTTCGGCCAACA
ACCGCAGTTGAGATCTCCCTTATTGTGGAAGAAAGCGAAGAAAGAATCACTGAAGAGCAA
ATTGATGAGATTATTGAGATTGTCATGTACTACAGTTCAGAAGACATGCTCCCTTACCGA
TGTCCCTCGTGTGGCAGTTCGAAACGCTTCCGAAGCCTCGTTGCTCTTCGTATGCACATG
TCTATCATACATGACATATCTACAGGCAACAATGGTAACCTGACAAATGAATCAACTGAC
CTCTTGGAAAAAAGTGAGACAGAAGGACCAGAAAGAGTGAAAGTGGGAACAATAGAAGAT
GTACCTTCCAGCAATGCAGTTGATGCCATCTTTAACAAGTATTCTGGCAGAATGGACAAC
ATACTCGGAAAATATGACAGGTATTTACATAATACACTCAAAACAAAGCAGATTGCTAAT
AGAATAAAGATGGCAAAGCAACTGGAACAAATAAAACAGCAGAAGAGAGATTTAAATATG
ATTCGAACAAACTGGGAAACTGTTCATGGATTGTCTCAACTTGTTGAAGAAACTGACATG
CTTATTAACTCAAGACCCGATAAGTCCTCTCCTAACCCTCCTCTGCATTCAACATCCAAT
CTAAGTCCTCAGTCGAGTCTTCCTCAACCTCATACTTCCTCCCATGCTCCTCAAGATGAT
TATTTGCTCCGGAGGCAAGTGGATGCAGGAGTTGCTCTTGCAGCCAAATACAAAACTTTA
GCAATTGAAGCCGAGCATAAACTTCAAGAAAAAATAGAAGAGGAGCATCATATGAAGCAA
TTCATTCAAGTTGTAGCGAACAAAGAACGTCATGCTAAGAAAAAACTCTCTGAATTATTA
GAAGAAATTTTGGAACGTGCTGAGACAGCTGAACAACAACTTGAGGACATCTCCAGTAGA
TCCGTTTATTTTATCGGTCCTCGAGCCCCCAAGCAGCCAGGAGTTGAAACGAAAGTGGCC
ACCACGAGTTTTGCTTCTGATCGTCGAGTTGTACTTTTTTGTATTTTTTCACGAATGAGA
AACGTCGACTTGCTCTCTATGGCCCTCGTGTGTCGGGAATGGCGAGACGTAGCGAGACAT
TCTCAACTTTGGAGTCGAATTCGTTTTGACAATCTTCGTATGGAAGGGAAGCTACTGAAG
AGAATATCAGAATGGTCATCGGAAACTTGTTACCTTCACTTACACAACATAAGTCTTCTG
CCTTCTAACATGGATGCTCCAGATACAGAAACAGGTTGTTTGGAGGAAGGGTTAGAGATG
ATCCTTAAAAGATGCGGAGACAAACTCCTCGTGCTGGCGATCGATAGATGCGACCCGGTG
ATCACAAGTCGAGTGATGTGGCTCGTTAGTTGTTACAATCGCAAAATTCGAAATATTGTT
TATCGAAGTTCGATCGACCCTCTTTGCCACCAGGTGGGGTGGTCGCTCGGTTCTGCTTGT
CGGGATATCGTGTCACTTGAGGTCGCCCCAGTACAACCATGCCCAGTTCCAGGTATGTTT
GACAACAACGTGGCTCGCTTGCTAAGTTGGTGTTGGCCACAGTTACAAGCATTAAGTTTT
GGGGGAATTAATATTGATGGGGCAGGTCTTATATCTGTTGGTAGGTTTTTTAAAATTACT
GTGTTGGTTTATTACTGTTTATTTTATTGCAATACACCTTTAATGCCTAATTTTTATTAT
ATACTGACATTGCCCCACCATGCGGGGATAAATAATTACCATTTATTCATTACTTTTGAA
AACCACACTAAAATCTGA
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[1-140] 8.683 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[2-114] 1.61E-7 |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[21-33] . |
| Gene3D |
Rpb4/RPC9_sf (IPR038324) - T[124-251] 2.3E-34 |
| SMART |
RNA_pol_II_Rpb4_core (IPR006590) - T[130-255] 1.3E-28 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[135-250] 1.05E-26 |
| Pfam |
RNA_pol_II_Rpb4 (IPR005574) - T[139-249] 7.4E-26 |
| SMART |
Znf_C2H2_type (IPR013087) - T[259-284] 0.0093 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[541-587] 9.021 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[549-785] 1.4E-13 |
| Pfam |
F-box_dom (IPR001810) - T[551-589] 9.8E-9 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[551-591] 4.84E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBX41_HUMAN | 41.509 % | 189 | 3.72E-50 |
| RPC9_HUMAN | 49.324 % | 95.5 | 6.03E-23 |