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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...' > 
  2. Transcript 'KH2012:KH.C3.502.v5....'

Transcript Model

Transcript Id

KH2012:KH.C3.502.v5.A.SL2-1

Possible name(s)

SYNE1; SYNE2; SYNE3

Gene model

KH2012:KH.C3.502

Location

KhC3 [23,934 / 26,658]

Sequences

Amino acid sequence

Length: 235

>KH.C3.502.v5.A.SL2-1
RDEVSSTSDVDSIASETSLHSSTPIKLKMLRRKVETNEAESSEKENSKDNAAVTDQASNT
DVTMPLPLATKYRTVTEYTEPDIHVLCKHTSIKSSTGNIFLTTTNETVDSDVESGYVEYD
VECELQVVRNAVNTAFQTTTVDAACVGIIPTKNGQSFKPHSGFVAKQDIKAKSDLFSRGI
KASIPFFLFFLFLYFILWLISASCISDDRTICLQRNNLHYSLSPMLTWTDGPPPT

Nucleotide sequence

Length: 1,522

>KH2012:KH.C3.502.v5.A.SL2-1
AGAGATGAAGTTAGTTCAACTTCTGACGTAGATTCAATTGCAAGTGAAACATCGTTACAT
TCCTCAACACCCATTAAGCTTAAAATGCTTAGAAGAAAGGTGGAAACCAACGAAGCGGAA
AGCTCGGAAAAGGAAAATTCTAAAGACAACGCTGCAGTTACTGATCAAGCGTCGAATACT
GACGTCACCATGCCATTACCACTAGCAACGAAATACAGGACAGTGACTGAATATACCGAA
CCAGACATCCACGTACTGTGCAAGCATACCTCCATCAAAAGTTCAACCGGGAACATTTTC
TTGACAACTACAAACGAAACCGTTGATAGTGACGTCGAATCTGGATACGTAGAATATGAC
GTAGAATGTGAACTCCAAGTTGTTCGGAACGCCGTCAATACAGCTTTCCAAACAACAACC
GTAGATGCCGCATGCGTAGGCATAATTCCAACCAAAAATGGACAATCCTTTAAACCCCAT
AGTGGATTTGTCGCCAAACAAGATATTAAAGCCAAGTCCGATTTATTTTCGCGTGGCATC
AAAGCGTCAATACCATTTTTTCTTTTCTTTTTGTTTCTATATTTTATACTGTGGCTAATT
TCAGCATCTTGTATTTCCGACGACCGGACGATTTGTTTGCAACGTAACAATCTACATTAT
TCGTTAAGCCCAATGCTAACTTGGACTGACGGTCCACCCCCAACGTAATAATGTCTGGGC
TATATCAGGGATGCATCATTTCCGTCCTTGCTAATTCAATTTGGAGTAATCACATAATTA
TTAAACGTACCTCTTATGTTTGTACTCATTATGTAGGTTAGTGTACAAACAGACTTTATT
TTTGTTACTTTTCTTCAAGGTGCATCACCCCAGCACAAATTTGCACCAAAACTGTATAGG
CGTAGGCAATATTACAGCTCGTATTTCTATATGTTAGATTTTGTAGATTTGTCATATTTT
TTTTTCGATTGCCGGCCTTACGTTGATTGCCCGTAGCTGTACTGCACTTTCTACTGTTAA
TACTAAAGTGAATGTAACGAAATTATTTTTTATTAGGTTTAGTAATTCGCCTTTCATAAA
TACAACATTATTGGCTGCATTTTGTGTTTTTGAATGAATATCACGTATTTACCGTCGCGT
GACGGGGCAACGACGGTCGTTGCAACAGTGGTGTTCTGTTTCATACACTCCTTGCCCGCT
TGCAAGTTATCACACAGTTGGTATAACACGAGTGTTATATATGTTTCATAAACCTCATGC
CTGTTTACAAGCTACCACGTATGTAACTTTGTGGGTAATTAATTCAAGAGGAGTTTTTTA
TGTATCGCAATTGGGCGCGCGTGTGCCTCCATAGTTCCTACACTAACACTTAGTGTCTCT
GTTTTTTTTTGCGGCGAACGGTTGTCATCTACTTTGCATTGTTAGGTTGTGCAAATAATG
TATACGCGTTAAGCAGAGTCCGTATGTAAACATATAAACATGTTTATACACGGACTCTGG
CGTTAAGCTATTGGTCGTAACT

InterProScan

ProSiteProfiles
KASH (IPR012315) - T[173-235] 11.51
SMART
KASH (IPR012315) - T[175-235] 2.4E-6
Pfam
KASH (IPR012315) - T[177-235] 7.9E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value