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  1. Transcript 'KH2012:KH.C3.51.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C3.51.v1.A.SL1-1

Possible name(s)

RAB11A; RAB11B; RAB25

Location

KhC3 [2,154,114 / 2,160,043]

Sequences

Amino acid sequence

Length: 236

>KH.C3.51.v1.A.SL1-1
RKFVCLISLIFYCELLNCAMGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESK
STIGVEFATRSIQVNGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN
VERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNV
EVAFQNILTEIYLIVSQKQINDSNNDEEVKDGQPVDIVISSTNPQPNKQSQCCKNI

Nucleotide sequence

Length: 1,772

>KH2012:KH.C3.51.v1.A.SL1-1
TTGAAACTTAAGTTTGAAAGTTTTATTCATCAGTTTCGAAGATCTGCTGCTGAGCTTCCA
TTACAAATCTAAAGAAAATTTGTCTGTTTAATTTCTTTGATTTTTTATTGTGAGCTTTTG
AATTGTGCAATGGGAACCAAAGATGACGAATACGATTATCTTTTTAAAGTTGTCCTGATT
GGAGACTCCGGCGTTGGAAAGAGTAACTTGCTTTCCCGATTTACAAGAAACGAATTCAAT
TTGGAAAGTAAAAGCACAATTGGGGTGGAATTTGCAACAAGAAGTATTCAAGTTAATGGC
AAAACCATAAAAGCTCAAATATGGGATACAGCAGGACAAGAAAGATACCGTGCAATCACA
TCTGCGTATTACCGTGGTGCTGTTGGGGCATTACTTGTGTACGACATTGCTAAACACCTC
ACTTACGAGAATGTGGAAAGGTGGCTGAAAGAACTTCGGGATCATGCTGATAATAACATT
GTGATTATGTTGGTTGGGAATAAGAGTGATCTGAGGCATCTAAGAGCTGTTCCAACAGAT
GAAGCTAAAGCTTTTTCAGAGAAGAACGGTTTATCATTTATTGAAACTTCTGCACTTGAT
TCAACAAATGTAGAAGTTGCGTTTCAAAACATCCTTACAGAAATTTACCTGATCGTATCC
CAGAAACAAATAAATGATTCAAACAATGATGAGGAAGTAAAAGATGGCCAACCGGTTGAT
ATTGTCATCTCATCTACTAACCCCCAACCTAACAAGCAGTCGCAATGTTGTAAAAATATC
TAGTTTCACCTGCTGCCCCATACGCACATGTGACCCTGCAGAAATTGGGGACCTCAGCCG
CTGTGATCGGCATTTTCTCTGCGCTTGACATAAATCACAGTGGCCAATTTCAAATCCAAT
TGTGATTCGGTTGTTATTCCTATTGTAAAGCCAATTTTGTATTACTTTTAATATATTCGC
ATACCGATTATAGGGTTATTTAACATATATATTTTCTCTTGCATAAATTTCTATATGCGA
GTCGAAAGTTGAGCAACTTGTTAGTGGAATATCCACTTCTTTATAAAATATGCCTGAGCA
AATTATCTTTATCGAAGGTCAAAACCTGCTTAATTTTAACACATTTCACTCAAGGATATA
AAACTAACATACTGACACACTGTTACCATTTAAATATCTTGTTTAGCTGTCTGTATTTGG
AACGACTTTTTTTTAAAAATCAGTCTGTTTAAACCTTTAGTAGGTGCTAATGCATACAAG
GTAGTTGTGTGCTTGTGGTTGGTAAACATGTGTAAATTTTAGTCATGACGTTCAGTGAAC
TGATTGCTTTCCTTCCCACCACTAAGAATTTAAAATTGTTTCATGAAATAATATTCCATG
GTTGTCTCGAAATGGACAGTGTTGAAAATTTCTCATAAACATGTATTTAACATTCAATTT
CACAATAAGCATGTTTGTCACCATACCACAGCTGCTGGTTTTGTCTTAAAAGGCTGATCA
GCTTATAGATAGAGTAGTTCTTGTTATAACCTGGTGTGTTGAGTGATTCATGATTCGTTA
TATCTATCGTGTACATATATTCCGTGCATTGCTTTATTATAACCTTATATTACGTGCCGG
CAATTTAGCTCATCATTAAAATAATTAAAACTTGACATTACTAGTTTTTTTTCTGCACTG
GATAATATTTTGATTCATATTTTTCTTAAAAATTATTGCAAAAAACAAAAATTTTGGTTG
ATTTTCAATAAATTACAGCTCTATTTCACAGC

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[26-206] 4.18E-60
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[29-187] 8.1E-46
Pfam
Small_GTPase (IPR001806) - T[32-192] 4.1E-62

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 83.871 % 368 3.29E-131
RB11B_HUMAN 84.475 % 370 8.98E-132
RAB25_HUMAN 60.748 % 265 1.16E-90