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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.C3.587.v2....'

Transcript Model

Transcript Id

KH2012:KH.C3.587.v2.A.nonSL6-1

Possible name(s)

COPS2; COPS4; PSMD11

Gene model

KH2012:KH.C3.587

Location

KhC3 [1,971,603 / 1,976,174]

Sequences

Amino acid sequence

Length: 439

>KH.C3.587.v2.A.nonSL6-1
KYDESDYFSSLSFFYDDLTMAAAMEFDRAQSLSLSDQASAINAYKDILNRDVKSTDEEGL
KLKEQSILQLGTLLQQQGHAEELGSLVKGVRPFLKSISKAKAAKLVRTLVDLFLDMEAST
GLEVQLCLECIEWAKEEKRTFLRQALEARLVALYFDTGRFQDALKSGSLLLRELKKLDDK
QLLVEVQVTESRTYHALGNLQKAKAALTSARTTANSMYCPPKMQAALDRQSGILNAAEEK
DWKTAYSYFYEAFEGYDSIESKKAVSSLKYMLLCKIMLNQSDDVQSLLSGKLALKYAGRD
IDAMRSVAKASHNRSISELKEVLMKFEEELKADVIIGAHFDKLYDNLLEQNLLRVIEPFA
KVQVSHIARLIDLPLATVEKKLSQMILDKKFHGILSQGEGVLILFDESTADKTYETALEV
ISSMSLVVDSLYQKAKRLT

Nucleotide sequence

Length: 1,962

>KH2012:KH.C3.587.v2.A.nonSL6-1
GAGTTTTTGAAAAGTTTTTACCGAAAAAGCTGTAGTTGCTTGAAAGTACGACGAAAGCGA
TTATTTTTCTTCGTTGAGTTTTTTCTATGATGATCTGACAATGGCTGCAGCTATGGAGTT
TGATCGAGCACAATCTTTAAGCCTGAGCGATCAGGCATCAGCAATAAATGCTTACAAAGA
CATTCTAAATCGTGATGTGAAAAGCACAGATGAAGAAGGTTTAAAATTAAAGGAACAAAG
TATTTTACAACTTGGAACTTTGCTACAACAACAAGGTCATGCTGAAGAACTTGGTTCTCT
CGTTAAAGGTGTCCGTCCTTTTCTTAAATCCATCAGTAAAGCAAAAGCTGCAAAGTTGGT
ACGAACTTTGGTTGACCTTTTCCTTGATATGGAAGCCAGTACAGGGCTTGAAGTTCAGCT
TTGCCTTGAATGTATTGAATGGGCAAAGGAGGAGAAACGTACTTTCTTAAGGCAAGCACT
GGAAGCGCGTCTTGTTGCTTTATATTTTGACACTGGTCGCTTCCAAGATGCCCTCAAGTC
CGGTTCACTTCTGTTACGAGAACTGAAGAAGTTAGATGACAAGCAGCTGTTGGTAGAAGT
GCAAGTAACAGAGTCCCGTACCTACCACGCACTGGGTAACCTTCAGAAGGCAAAAGCAGC
ACTTACCTCTGCGCGGACCACAGCAAACTCCATGTATTGCCCTCCGAAAATGCAAGCTGC
ACTCGATCGACAATCAGGAATTCTTAACGCTGCAGAGGAGAAGGATTGGAAGACAGCTTA
CTCATATTTCTATGAGGCGTTTGAAGGATATGATTCCATTGAAAGCAAGAAAGCGGTTTC
ATCATTGAAGTACATGCTGTTGTGTAAGATCATGCTTAATCAATCAGATGATGTGCAGTC
CTTACTTAGTGGTAAACTTGCGCTTAAATACGCTGGGAGAGATATTGATGCAATGCGAAG
TGTGGCAAAAGCAAGTCACAATAGATCCATTTCGGAATTAAAAGAGGTTTTAATGAAATT
CGAAGAAGAATTAAAAGCGGATGTGATAATTGGAGCACATTTTGACAAACTCTATGATAA
TCTCCTGGAACAAAATCTTCTGCGTGTCATTGAACCTTTTGCTAAAGTTCAAGTATCTCA
TATTGCTCGATTGATAGACCTTCCTTTGGCAACTGTAGAAAAGAAGTTGTCCCAAATGAT
TCTTGACAAGAAATTCCATGGTATCTTATCCCAGGGTGAAGGGGTTTTAATTTTATTTGA
CGAATCCACCGCTGACAAAACCTATGAAACGGCTCTTGAAGTGATCAGCAGCATGTCCTT
GGTTGTGGACTCACTTTACCAAAAGGCCAAACGATTGACATAAAAAGCACCCAAATTCAG
CAAAACTTTTCATTTATCATTGTTTCTAGCTTGAGGTTACTACTATATATAGAAGCTGCA
AGATTTCTGTGTTCTTATGTATTTGGTTCATATAAAATTCAAGGTCATGCTGTTCTTTAA
AGGGAAAAGGGATGTACTGTTAAAATTCATTTTATGTTTTGAAATCGCCTCGATTTGACT
GAAAGTAGCCACCTGTACAAAGTCACCGTACCCAGCGGCTGGGTTTGTTGCGTACTGCTG
CTGGTGTGAAGGTCTTTTTGAATAAACAGCTAATGGGACGCCTAAGCTTTGTATATTCGC
TTCTATAGATGGTGTGTGTTTGTGTGGCGTATCACGGAAACAGCAGACCGCATTTGCTCA
CCGTCCACATTTGTCGGAATGTTTAAAAATAAAATTTTTGTTTAATTTGGTTTTTCACGA
TCAGATTTGGTAAGGAAACCGTTGTATCATAGTACTCTGTTTTAGAGTACTATGGTTGTA
TAAACAGTCACCGCAAAATAGAAGTACCGTATTTATCAGAGATACCGAAACATGTTTAGG
TACGTAGTTTTACCATAGTATGAGTTCTATGCTTTTACAGTT

InterProScan

PANTHER
PSMD11 (IPR035295) - T[21-439] 8.2E-201
Pfam
PCI_dom (IPR000717) - T[303-404] 1.3E-16
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[333-414] 6.8E-16
SMART
PCI_dom (IPR000717) - T[338-421] 1.8E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSD11_HUMAN 69.431 % 607 0
CSN2_HUMAN 25.738 % 85.1 7.91E-18