Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.587.v2.A.nonSL9-1

Possible name(s)

COPS2; COPS4; PSMD11

Gene model

KH2012:KH.C3.587

Location

KhC3 [1,971,603 / 1,976,161]

Sequences

Amino acid sequence

Length: 439

>KH.C3.587.v2.A.nonSL9-1
KYDESDYFSSLSFFYDDLTMAAAMEFDRAQSLSLSDQASAINAYKDILNRDVKSTDEEGL
KLKEQSILQLGTLLQQQGHAEELGSLVKGVRPFLKSISKAKAAKLVRTLVDLFLDMEAST
GLEVQLCLECIEWAKEEKRTFLRQALEARLVALYFDTGRFQDALKSGSLLLRELKKLDDK
QLLVEVQVTESRTYHALGNLQKAKAALTSARTTANSMYCPPKMQAALDRQSGILNAAEEK
DWKTAYSYFYEAFEGYDSIESKKAVSSLKYMLLCKIMLNQSDDVQSLLSGKLALKYAGRD
IDAMRSVAKASHNRSISELKEVLMKFEEELKADVIIGAHFDKLYDNLLEQNLLRVIEPFA
KVQVSHIARLIDLPLATVEKKLSQMILDKKFHGILSQGEGVLILFDESTADKTYETALEV
ISSMSLVVDSLYQKAKRLT

Nucleotide sequence

Length: 1,949

>KH2012:KH.C3.587.v2.A.nonSL9-1
GTTTTTACCGAAAAAGCTGTAGTTGCTTGAAAGTACGACGAAAGCGATTATTTTTCTTCG
TTGAGTTTTTTCTATGATGATCTGACAATGGCTGCAGCTATGGAGTTTGATCGAGCACAA
TCTTTAAGCCTGAGCGATCAGGCATCAGCAATAAATGCTTACAAAGACATTCTAAATCGT
GATGTGAAAAGCACAGATGAAGAAGGTTTAAAATTAAAGGAACAAAGTATTTTACAACTT
GGAACTTTGCTACAACAACAAGGTCATGCTGAAGAACTTGGTTCTCTCGTTAAAGGTGTC
CGTCCTTTTCTTAAATCCATCAGTAAAGCAAAAGCTGCAAAGTTGGTACGAACTTTGGTT
GACCTTTTCCTTGATATGGAAGCCAGTACAGGGCTTGAAGTTCAGCTTTGCCTTGAATGT
ATTGAATGGGCAAAGGAGGAGAAACGTACTTTCTTAAGGCAAGCACTGGAAGCGCGTCTT
GTTGCTTTATATTTTGACACTGGTCGCTTCCAAGATGCCCTCAAGTCCGGTTCACTTCTG
TTACGAGAACTGAAGAAGTTAGATGACAAGCAGCTGTTGGTAGAAGTGCAAGTAACAGAG
TCCCGTACCTACCACGCACTGGGTAACCTTCAGAAGGCAAAAGCAGCACTTACCTCTGCG
CGGACCACAGCAAACTCCATGTATTGCCCTCCGAAAATGCAAGCTGCACTCGATCGACAA
TCAGGAATTCTTAACGCTGCAGAGGAGAAGGATTGGAAGACAGCTTACTCATATTTCTAT
GAGGCGTTTGAAGGATATGATTCCATTGAAAGCAAGAAAGCGGTTTCATCATTGAAGTAC
ATGCTGTTGTGTAAGATCATGCTTAATCAATCAGATGATGTGCAGTCCTTACTTAGTGGT
AAACTTGCGCTTAAATACGCTGGGAGAGATATTGATGCAATGCGAAGTGTGGCAAAAGCA
AGTCACAATAGATCCATTTCGGAATTAAAAGAGGTTTTAATGAAATTCGAAGAAGAATTA
AAAGCGGATGTGATAATTGGAGCACATTTTGACAAACTCTATGATAATCTCCTGGAACAA
AATCTTCTGCGTGTCATTGAACCTTTTGCTAAAGTTCAAGTATCTCATATTGCTCGATTG
ATAGACCTTCCTTTGGCAACTGTAGAAAAGAAGTTGTCCCAAATGATTCTTGACAAGAAA
TTCCATGGTATCTTATCCCAGGGTGAAGGGGTTTTAATTTTATTTGACGAATCCACCGCT
GACAAAACCTATGAAACGGCTCTTGAAGTGATCAGCAGCATGTCCTTGGTTGTGGACTCA
CTTTACCAAAAGGCCAAACGATTGACATAAAAAGCACCCAAATTCAGCAAAACTTTTCAT
TTATCATTGTTTCTAGCTTGAGGTTACTACTATATATAGAAGCTGCAAGATTTCTGTGTT
CTTATGTATTTGGTTCATATAAAATTCAAGGTCATGCTGTTCTTTAAAGGGAAAAGGGAT
GTACTGTTAAAATTCATTTTATGTTTTGAAATCGCCTCGATTTGACTGAAAGTAGCCACC
TGTACAAAGTCACCGTACCCAGCGGCTGGGTTTGTTGCGTACTGCTGCTGGTGTGAAGGT
CTTTTTGAATAAACAGCTAATGGGACGCCTAAGCTTTGTATATTCGCTTCTATAGATGGT
GTGTGTTTGTGTGGCGTATCACGGAAACAGCAGACCGCATTTGCTCACCGTCCACATTTG
TCGGAATGTTTAAAAATAAAATTTTTGTTTAATTTGGTTTTTCACGATCAGATTTGGTAA
GGAAACCGTTGTATCATAGTACTCTGTTTTAGAGTACTATGGTTGTATAAACAGTCACCG
CAAAATAGAAGTACCGTATTTATCAGAGATACCGAAACATGTTTAGGTACGTAGTTTTAC
CATAGTATGAGTTCTATGCTTTTACAGTT

InterProScan

PANTHER	PSMD11 (IPR035295) - T[21-439] 8.2E-201
Pfam	PCI_dom (IPR000717) - T[303-404] 1.3E-16
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[333-414] 6.8E-16
SMART	PCI_dom (IPR000717) - T[338-421] 1.8E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PSD11_HUMAN	69.431 %	607	0
CSN2_HUMAN	25.738 %	85.1	7.91E-18