- Transcript 'KH2012:KH.S605.3.v1....' >
- Transcript 'KH2012:KH.C2.101.v2....' >
- Molecular Tool 'Ci-Bra>Tbx2/3-VP16::GFP (José-Edwards 2013)' >
- Transcript 'KH2012:KH.C3.616.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.616.v1.A.SL2-1
Possible name(s)
AVPR1A; GNRHR; NPSR1
Gene model
Location
KhC3 [4,018,075 / 4,035,046]
Amino acid sequence
Length: 472
>KH.C3.616.v1.A.SL2-1
KPVIRLVSESNLCTNSCFMATVSSLVTTTATVMDGTTMSTPITSTFDINASYHSLNSTLD
PNSTYFEKWCPYYHKMLTFNTIQLTRVIITWILFLVSTCGNSFVLYCLCMRKQRLHVHVI
TMHLTLADLAFTFFSMPMDATWNTTMAWLGSEFLCRLCQFLKQFGMYISSLMVVVIALDR
VFSILSPMSANQQRKRTKILLISAWTLSLLCAIPALFLFSLIKKQFCPDQPIFYQCVDFS
PNINKQDLKPYYFFTMCVSFLIPLFFTVISYSLILCEINAMQRRDERITGRRDNNIERAR
MKTLVLTSLVTLSFIVLWGPYYAMGIYHWFNPRERATFPKEISVGLFVLMYFHPAVHPIL
YGFFMKDIRKHFLVTLMRCFKLSRIPASRRASEKFGSCQRHLPEGNPHPRAGRAASSPLL
SPVTERTVLRATSVPFIDAGKCNKNNNRQEIFLQVPPTNGELSTKRCCDERV
Nucleotide sequence
Length: 2,875
>KH2012:KH.C3.616.v1.A.SL2-1
GAAACCTGTCATAAGACTTGTTAGTGAGTCAAACCTGTGTACAAATAGCTGCTTCATGGC
GACAGTTAGTTCGTTAGTAACAACAACAGCCACAGTGATGGATGGTACCACCATGTCAAC
TCCTATCACCTCTACCTTTGACATAAATGCATCTTATCATTCGCTGAACTCAACATTGGA
CCCAAATTCAACTTACTTTGAAAAGTGGTGTCCGTATTACCATAAAATGCTTACTTTCAA
CACTATTCAACTGACGCGAGTGATTATAACATGGATCCTGTTCTTGGTCAGCACGTGTGG
AAACAGCTTTGTTCTCTACTGTCTTTGCATGCGGAAGCAGAGACTTCATGTCCACGTCAT
CACCATGCACCTAACATTAGCTGACCTGGCGTTCACATTCTTCAGCATGCCAATGGACGC
AACATGGAACACAACAATGGCCTGGCTTGGGAGCGAATTCCTGTGTCGGTTATGTCAGTT
TCTGAAGCAGTTTGGAATGTACATCAGCTCCTTAATGGTTGTGGTTATAGCACTTGATAG
AGTATTCAGTATCCTGTCTCCAATGTCGGCAAACCAGCAACGGAAACGAACAAAGATTCT
CCTCATTAGCGCATGGACACTTAGTCTTTTATGTGCAATACCTGCGTTGTTTCTCTTTTC
ACTGATCAAAAAACAGTTCTGTCCGGACCAGCCAATCTTTTACCAGTGCGTAGATTTCAG
TCCTAACATAAACAAACAAGACTTGAAGCCATATTACTTCTTCACTATGTGTGTGAGCTT
CCTTATTCCACTTTTCTTCACCGTCATCTCATATTCCTTGATCTTGTGTGAGATAAACGC
CATGCAGCGGAGAGACGAAAGAATTACCGGGCGCCGAGATAACAACATTGAACGAGCAAG
AATGAAGACACTGGTGTTGACTTCGTTGGTTACCCTCTCATTTATTGTACTGTGGGGTCC
ATACTACGCCATGGGTATCTATCATTGGTTTAATCCAAGAGAGAGAGCCACATTTCCAAA
AGAAATTTCGGTTGGTCTTTTCGTCCTGATGTATTTTCACCCTGCTGTACACCCGATACT
TTATGGTTTCTTTATGAAGGACATACGCAAGCACTTCCTCGTCACTCTAATGCGGTGCTT
TAAGCTTTCCAGAATACCAGCATCCCGCCGAGCCTCTGAGAAGTTCGGGTCTTGCCAGCG
CCACCTGCCGGAAGGAAATCCTCACCCTCGTGCCGGGCGAGCAGCGAGCTCACCTCTCCT
CAGTCCTGTAACGGAACGTACTGTGTTGCGCGCCACCAGCGTCCCCTTTATAGATGCCGG
GAAATGCAACAAAAACAACAACAGACAGGAGATATTTCTTCAAGTTCCACCAACAAACGG
AGAGCTTTCGACTAAGCGCTGTTGTGACGAACGAGTATGACGTCATCGTGGCGTCACCAT
GACGTAATAATCCTGGTTCAACTATACTGCGGAAGCTTATACCTTCATCAAAGGCGTGGC
AGTCCGACCACACCGGCTTCCCTCCGTGCGTGTCGCCATAATGGTACCTGGAAAACAACA
TGCGATGTGATGTTCATTATATGTTTTCAACGCATACGCAGTGATATTTTTAAGGTGTTG
AAGAGGAAAACGTTCCCTTATATTCTTCCAATTGGCGCTTAATACTATCGTTCCAAATTT
TAAAAGAAAATACGACAAAGTTCATTAAAAATTATAGGTTGGGGGGAGATGGGACACCTT
TTCATTCTGTTTTCTTAATCTATTTGGTAGTAAATAAGAACATTTAAAGAATTTTAAAAC
CGTAACCTTACAACTCCCATATACCGTTGTAAATTGTTTAAAACAGGATATTTAGATATT
ATGTTCCAAAGGTGTCCCGTCTTCCCCCACCCTACTATTTAATCACATAAGACAAAGCTT
AAGAATACACTGCACACGTACTAGATACGCTACGTTCGCCAGCCATACGTTTTCTGTGCA
ATACCTTGCTTGTAATTATATCCCATACTAAAATGTCCCAGCGAGTAAATGCAAAAGTTC
CACCCGTTGTAAATTGTTACCGGGACATCCCCATTTGTGATCCCAACAGCACTCGAATTT
ATTCGTCCCCATTTCTGTTTCTGTTTCATTCCTTTACTTTTGCTTCAACGGAAAATTGAA
CGACATTTACTTTTCTATGTTTTGCGAGTTCAGTTTGCAGCTTTCGTCAATAGTTTCACT
TCTTGTTGTTATTTATTAGGGTGGGGGAAGATGGAACACCTTTTCACCCTATTTTCTCGT
CTCATTTGGTAGTAAACAAAGAACATTCAAAGAATTGTAAAACCGTATCCTCACGACACC
CATAGACCGTTGTAAATTGTTGAGAACACATTTATGATATTAGGATATTATATGGCGTCC
CATCTTACCCCAACCTACTAAACATTTATATTGAATCCTTATTTTTAACATCTAAACGTC
AACAGTCCGCTAACTATTAATAACGTTGCCGAATCCGCAACTTTATAAATACTTCCTTAA
ATGTAGCTGTTTCACTTCTTACTAATTCGTCTTAGCATTATATAGGCCGATAGCCGTATA
TTATAATTCTACTCCATTCTATATGGGTGAGGTTCTACGGCAAGGCACGCCAGGGGTCCT
GGAATTTAGGCCAGAATTTGCCCATTATGAATTGGCCATTTTTTAAATACCTAATCCATG
GCCCATTACCCAAACACTCACATTATAGTTACTGCTGGTATGCACCGCTTGCCACACTAG
AATAATCCCGCATTGTTTTAAATTAACTTTTCGCGTCACAGGTGTATACGATGTTCCCAT
ATTGTCGTCCGGGAAATGCTTTCAGTAAAATATTAACTTTGTATTTTGCGTCGAT
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[85-109] 7.9E-24 - T[117-138] 7.9E-24 - T[162-184] 7.9E-24 - T[196-217] 7.9E-24 - T[252-275] 7.9E-24 - T[303-327] 7.9E-24 - T[343-369] 7.9E-24 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[100-361] 1.7E-35 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[100-361] 32.95 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 33.91 % | 160 | 1.9E-45 |
| GNRR2_HUMAN | 35.685 % | 130 | 2.19E-34 |
| NPSR1_HUMAN | 25.478 % | 104 | 1.13E-24 |