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TRANSCRIPT CARD

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  1. Region 'REG00001391' > 
  2. Transcript 'KH2012:KH.L116.85.v1...' > 
  3. Transcript 'KH2012:KH.C7.455.v1....' > 
  4. Region 'REG00001372' > 
  5. Transcript 'KH2012:KH.C3.616.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.616.v1.R.ND1-1

Possible name(s)

AVPR1A; GNRHR; NPSR1

Gene model

KH2012:KH.C3.616

Location

KhC3 [4,018,073 / 4,035,046]

Sequences

Amino acid sequence

Length: 473

>KH.C3.616.v1.R.ND1-1
RKPVIRLVSESNLCTNSCFMATVSSLVTTTATVMDGTTMSTPITSTFDINASYHSLNSTL
DPNSTYFEKWCPYYHKMLTFNTIQLTRVIITWILFLVSTCGNSFVLYCLCMRKQRLHVHV
ITMHLTLADLAFTFFSMPMDATWNTTMAWLGSEFLCRLCQFLKQFGMYISSLMVVVIALD
RVFSILSPMSANQQRKRTKILLISAWTLSLLCAIPALFLFSLIKKQFCPDQPIFYQCVDF
SPNINKQDLKPYYFFTMCVSFLIPLFFTVISYSLILCEINAMQRRDERITGRRDNNIERA
RMKTLVLTSLVTLSFIVLWGPYYAMGIYHWFNPRERATFPKEISVGLFVLMYFHPAVHPI
LYGFFMKDIRKHFLVTLMRCFKLSRIPASRRASEKFGSCQRHLPEGNPHPRAGRAASSPL
LSPVTERTVLRATSVPFIDAGKCNKNNNRQEIFLQVPPTNGELSTKRCCDERV

Nucleotide sequence

Length: 2,877

>KH2012:KH.C3.616.v1.R.ND1-1
AGGAAACCTGTCATAAGACTTGTTAGTGAGTCAAACCTGTGTACAAATAGCTGCTTCATG
GCGACAGTTAGTTCGTTAGTAACAACAACAGCCACAGTGATGGATGGTACCACCATGTCA
ACTCCTATCACCTCTACCTTTGACATAAATGCATCTTATCATTCGCTGAACTCAACATTG
GACCCAAATTCAACTTACTTTGAAAAGTGGTGTCCGTATTACCATAAAATGCTTACTTTC
AACACTATTCAACTGACGCGAGTGATTATAACATGGATCCTGTTCTTGGTCAGCACGTGT
GGAAACAGCTTTGTTCTCTACTGTCTTTGCATGCGGAAGCAGAGACTTCATGTCCACGTC
ATCACCATGCACCTAACATTAGCTGACCTGGCGTTCACATTCTTCAGCATGCCAATGGAC
GCAACATGGAACACAACAATGGCCTGGCTTGGGAGCGAATTCCTGTGTCGGTTATGTCAG
TTTCTGAAGCAGTTTGGAATGTACATCAGCTCCTTAATGGTTGTGGTTATAGCACTTGAT
AGAGTATTCAGTATCCTGTCTCCAATGTCGGCAAACCAGCAACGGAAACGAACAAAGATT
CTCCTCATTAGCGCATGGACACTTAGTCTTTTATGTGCAATACCTGCGTTGTTTCTCTTT
TCACTGATCAAAAAACAGTTCTGTCCGGACCAGCCAATCTTTTACCAGTGCGTAGATTTC
AGTCCTAACATAAACAAACAAGACTTGAAGCCATATTACTTCTTCACTATGTGTGTGAGC
TTCCTTATTCCACTTTTCTTCACCGTCATCTCATATTCCTTGATCTTGTGTGAGATAAAC
GCCATGCAGCGGAGAGACGAAAGAATTACCGGGCGCCGAGATAACAACATTGAACGAGCA
AGAATGAAGACACTGGTGTTGACTTCGTTGGTTACCCTCTCATTTATTGTACTGTGGGGT
CCATACTACGCCATGGGTATCTATCATTGGTTTAATCCAAGAGAGAGAGCCACATTTCCA
AAAGAAATTTCGGTTGGTCTTTTCGTCCTGATGTATTTTCACCCTGCTGTACACCCGATA
CTTTATGGTTTCTTTATGAAGGACATACGCAAGCACTTCCTCGTCACTCTAATGCGGTGC
TTTAAGCTTTCCAGAATACCAGCATCCCGCCGAGCCTCTGAGAAGTTCGGGTCTTGCCAG
CGCCACCTGCCGGAAGGAAATCCTCACCCTCGTGCCGGGCGAGCAGCGAGCTCACCTCTC
CTCAGTCCTGTAACGGAACGTACTGTGTTGCGCGCCACCAGCGTCCCCTTTATAGATGCC
GGGAAATGCAACAAAAACAACAACAGACAGGAGATATTTCTTCAAGTTCCACCAACAAAC
GGAGAGCTTTCGACTAAGCGCTGTTGTGACGAACGAGTATGACGTCATCGTGGCGTCACC
ATGACGTAATAATCCTGGTTCAACTATACTGCGGAAGCTTATACCTTCATCAAAGGCGTG
GCAGTCCGACCACACCGGCTTCCCTCCGTGCGTGTCGCCATAATGGTACCTGGAAAACAA
CATGCGATGTGATGTTCATTATATGTTTTCAACGCATACGCAGTGATATTTTTAAGGTGT
TGAAGAGGAAAACGTTCCCTTATATTCTTCCAATTGGCGCTTAATACTATCGTTCCAAAT
TTTAAAAGAAAATACGACAAAGTTCATTAAAAATTATAGGTTGGGGGGAGATGGGACACC
TTTTCATTCTGTTTTCTTAATCTATTTGGTAGTAAATAAGAACATTTAAAGAATTTTAAA
ACCGTAACCTTACAACTCCCATATACCGTTGTAAATTGTTTAAAACAGGATATTTAGATA
TTATGTTCCAAAGGTGTCCCGTCTTCCCCCACCCTACTATTTAATCACATAAGACAAAGC
TTAAGAATACACTGCACACGTACTAGATACGCTACGTTCGCCAGCCATACGTTTTCTGTG
CAATACCTTGCTTGTAATTATATCCCATACTAAAATGTCCCAGCGAGTAAATGCAAAAGT
TCCACCCGTTGTAAATTGTTACCGGGACATCCCCATTTGTGATCCCAACAGCACTCGAAT
TTATTCGTCCCCATTTCTGTTTCTGTTTCATTCCTTTACTTTTGCTTCAACGGAAAATTG
AACGACATTTACTTTTCTATGTTTTGCGAGTTCAGTTTGCAGCTTTCGTCAATAGTTTCA
CTTCTTGTTGTTATTTATTAGGGTGGGGGAAGATGGAACACCTTTTCACCCTATTTTCTC
GTCTCATTTGGTAGTAAACAAAGAACATTCAAAGAATTGTAAAACCGTATCCTCACGACA
CCCATAGACCGTTGTAAATTGTTGAGAACACATTTATGATATTAGGATATTATATGGCGT
CCCATCTTACCCCAACCTACTAAACATTTATATTGAATCCTTATTTTTAACATCTAAACG
TCAACAGTCCGCTAACTATTAATAACGTTGCCGAATCCGCAACTTTATAAATACTTCCTT
AAATGTAGCTGTTTCACTTCTTACTAATTCGTCTTAGCATTATATAGGCCGATAGCCGTA
TATTATAATTCTACTCCATTCTATATGGGTGAGGTTCTACGGCAAGGCACGCCAGGGGTC
CTGGAATTTAGGCCAGAATTTGCCCATTATGAATTGGCCATTTTTTAAATACCTAATCCA
TGGCCCATTACCCAAACACTCACATTATAGTTACTGCTGGTATGCACCGCTTGCCACACT
AGAATAATCCCGCATTGTTTTAAATTAACTTTTCGCGTCACAGGTGTATACGATGTTCCC
ATATTGTCGTCCGGGAAATGCTTTCAGTAAAATATTAACTTTGTATTTTGCGTCGAT

InterProScan

PRINTS
GPCR_Rhodpsn (IPR000276) - T[86-110] 8.0E-24 - T[118-139] 8.0E-24 - T[163-185] 8.0E-24 - T[197-218] 8.0E-24 - T[253-276] 8.0E-24 - T[304-328] 8.0E-24 - T[344-370] 8.0E-24
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[101-362] 32.95
Pfam
GPCR_Rhodpsn (IPR000276) - T[101-362] 1.7E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GNRHR_HUMAN 33.91 % 160 1.9E-45
GNRR2_HUMAN 35.685 % 130 2.04E-34
NPSR1_HUMAN 25.478 % 104 1.1E-24