- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C6.263.v1....' >
- Transcript 'Cisavi.CG.ENS81.R72....' >
- Transcript 'KH2012:KH.L30.5.v1.C...' >
- Transcript 'KH2012:KH.C3.719.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.719.v1.A.SL3-1
Possible name(s)
ABCF1; ABCF2; ABCF3
Gene model
Location
KhC3 [3,950,301 / 3,960,515]
Amino acid sequence
Length: 677
>KH.C3.719.v1.A.SL3-1
ISYYLNKKSDNTFSYTMPSEAAKRRANKKKEAAKNRQRPAKKAEEEEEVPETNGTTNGVS
TNGITNGFKKGLVITDGEADKEARSCTGVLASHPISSDLHIYNYSCTYHGQVLFQDTNLE
LNCGNRYGLIGANGCGKSTMLATLGGREVPIPDHIDSFHLKNEAPPSDITPIKYVLDVAD
ERHRLEADAEKIMAVDPESDQLFKIYERLDELGADMAEVTASRILHGLGFTAEMQKKKLS
DFSGGWRMRVSLARALFLKPYLLLLDEPTNHLDLDACVWLEEELKKFKHILVLVSHSQDF
LNGVCTKIIHMNLKKLNYFSGNYDAFIKTRGELVENQMKRYQKEQDQINHMKDYIARFGH
GSAKLARQAQSKEKTLAKMVDKERVREESTFNFYFPECSKLAPPVLMVQNISFRYSDETP
QIYKDVEFGVDMDTRLALVGPNGAGKSTLLKLISGELSPTDGIIRRHSHLKIARYHQHLQ
DHIDVNLTPLEYIRKCYPEVKDVEQLRKIIGRYGISGKQQLCPIKKLSDGQKCRVVFAWL
SSQNPNLLLLDEPTNHLDIETIDSLAEAINEFSGGLILVSHDFRLIDQVAKDIWVCENCT
VTPWTQNIRAYKDLLRKKVLNREKKILKGESADHNAGKVKTAAVPVKKVPSPASKGSIIG
IVKPKAPATVDFWNGED
Nucleotide sequence
Length: 2,549
>KH2012:KH.C3.719.v1.A.SL3-1
GAAACAACAATAGATAATCTTAAATATCTTATTATCTGAATAAAAAATCAGATAATACTT
TCTCGTACACTATGCCATCTGAAGCTGCTAAACGCCGGGCAAACAAAAAGAAAGAAGCCG
CAAAGAATCGACAAAGACCAGCTAAGAAGGCTGAAGAAGAAGAAGAAGTTCCTGAAACAA
ATGGAACTACGAACGGTGTCTCAACCAACGGAATAACAAATGGATTCAAGAAAGGTCTCG
TAATAACGGATGGAGAAGCTGACAAGGAAGCAAGATCTTGTACTGGAGTTTTAGCTTCAC
ATCCAATATCTTCGGATCTTCATATTTATAATTATTCGTGCACCTACCATGGCCAGGTGT
TGTTTCAAGATACGAACTTAGAGTTGAACTGTGGGAACCGATACGGATTGATTGGTGCCA
ATGGTTGTGGTAAATCCACTATGTTGGCAACGCTGGGTGGCAGAGAAGTTCCAATTCCCG
ACCATATTGATTCCTTTCATTTAAAAAATGAAGCCCCACCTTCAGACATCACCCCCATTA
AATATGTGCTTGATGTTGCAGATGAAAGACACAGATTAGAAGCAGATGCTGAGAAAATAA
TGGCAGTTGATCCTGAAAGCGATCAATTGTTCAAGATCTACGAACGTTTGGATGAACTGG
GAGCGGACATGGCAGAAGTCACGGCATCTCGTATCCTGCATGGTCTCGGATTCACGGCCG
AGATGCAGAAGAAGAAGTTGTCGGACTTCTCTGGAGGTTGGAGGATGAGAGTATCACTTG
CCAGGGCATTATTCTTAAAGCCATATCTGTTGTTACTTGATGAACCCACCAACCATCTTG
ATCTTGATGCTTGTGTATGGCTGGAGGAAGAATTGAAAAAGTTCAAACACATCCTTGTAC
TCGTGTCGCATTCTCAAGATTTTTTGAATGGTGTTTGCACAAAGATAATCCACATGAATC
TGAAGAAACTTAATTATTTTTCAGGTAATTACGATGCGTTTATTAAAACTCGAGGTGAAT
TGGTGGAAAATCAAATGAAACGTTACCAGAAGGAACAAGATCAAATTAACCACATGAAGG
ATTACATCGCTAGATTTGGTCACGGAAGTGCTAAGCTCGCCAGGCAAGCACAGAGCAAAG
AAAAAACTCTTGCAAAAATGGTGGACAAAGAGCGTGTACGAGAAGAAAGCACCTTCAACT
TTTACTTCCCTGAATGTTCAAAACTTGCCCCTCCCGTGCTTATGGTGCAAAATATTAGTT
TCCGATATTCAGATGAAACTCCCCAAATTTACAAAGACGTCGAATTCGGAGTCGACATGG
ACACCAGGTTGGCGTTGGTCGGACCTAATGGGGCAGGAAAATCAACTTTGTTGAAACTGA
TAAGTGGAGAGCTCAGTCCTACAGATGGAATTATTAGAAGACACAGCCATTTGAAGATAG
CAAGATATCATCAGCATCTGCAAGACCACATTGATGTAAACCTCACACCATTGGAATATA
TAAGGAAGTGTTATCCAGAGGTCAAAGACGTGGAACAGTTAAGGAAAATAATTGGACGAT
ATGGGATCAGTGGAAAACAACAGCTATGCCCAATAAAGAAACTGTCAGATGGGCAGAAGT
GCCGTGTGGTATTTGCATGGCTGTCGTCCCAAAACCCCAACCTACTATTACTTGACGAAC
CTACGAACCATCTTGATATTGAAACAATTGATTCACTTGCCGAAGCAATCAACGAATTTA
GTGGCGGTTTAATCCTAGTGTCTCATGACTTTAGACTTATTGATCAGGTAGCTAAAGATA
TTTGGGTTTGTGAGAACTGCACGGTAACTCCGTGGACACAAAACATCAGAGCTTACAAAG
ATTTGCTCAGGAAAAAAGTTTTAAACAGAGAAAAGAAAATATTGAAAGGTGAAAGTGCTG
ATCATAACGCTGGGAAAGTTAAGACAGCAGCTGTTCCTGTTAAAAAAGTTCCATCTCCTG
CAAGCAAAGGAAGTATTATTGGCATTGTGAAACCTAAAGCCCCAGCCACTGTCGATTTTT
GGAATGGCGAGGATTAAATCTGGAAACACTAAGTTGAATTCATCTGGAAACACTGCATAT
AGGAAATTAAATCTCTGGTGGTCACTGGCTGCCTGGAATCTTGTGTTTTTTAGTAACGCG
CATGCGCAGTGTTGCCCGGAATCGCATATTTATTACTAGGCAATTTCAAGTTTGTATCAT
AGGCAATGTCTCTTATTCTCTTTCTTGCGTGCGCGTCTGTTATTGATTGCAAACAGGGAG
TTTCCTATGCCGTTTTGGAGGGCGCGTATAAATTTCCCATAAATTTCAATTAAAACCAAT
AAAAAAACGGGACGCGCTGAACGTCTGGTCGATGCCAAGTTCGAAAAACGCCCCATTGGT
TGATGCGGTGACGTCTGTGGTATGACGTCATTTATTTTCGTATTTTCCTTGTTGAAAACC
AAACCCCCCAAGTATTTGTATTTATAATGAAAACCACGTTGGTAGTCGTGGTGTGTAAAG
AAAATAAAATGTGAAAAGATTGGATTTTA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[92-182] 5.42E-40 - T[211-343] 5.42E-40 - T[384-602] 6.68E-42 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[99-338] 14.072 - T[406-623] 14.493 |
| Pfam |
ABC_transporter-like (IPR003439) - T[115-270] 1.1E-21 - T[423-555] 2.5E-23 |
| SMART |
AAA+_ATPase (IPR003593) - T[123-317] 2.3E-5 - T[432-600] 2.1E-8 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[242-256] . |
| Pfam |
ABC_tran_Xtn (IPR032781) - T[309-393] 1.7E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCF2_HUMAN | 64.791 % | 797 | 0 |
| ABCF3_HUMAN | 40.678 % | 414 | 1.27E-135 |
| ABCF1_HUMAN | 40 % | 352 | 4.03E-110 |