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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'KH2012:KH.C3.762.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.762.v1.A.SL2-1

Possible name(s)

EFNA1; EFNA4; EFNB2

Location

KhC3 [2,766,667 / 2,775,217]

Sequences

Amino acid sequence

Length: 256

>KH.C3.762.v1.A.SL2-1
KLIGQIYEMLIHQCVFLLTCLSLVKLVISRTRHVVFWDRSINSSLTTELRLQVQINEWMD
ILCPKPARNDEKRGEELYIDVFNVTAAQYHRCNTQKIQRVLRCSDPKREIKLTTKFQERS
PSPLGFVFRPGQSYYYISKPSKGGTRGCSTDTLRLVVEVESQHGRVEENKHTRFDPWLDQ
SEFGMKHNKRHHHLKNAENELEKREPQEPVVLSQKNSAAPPDGGNSAVGIHSRRHDTRLL
ALITSSLLMVLFTKWV

Nucleotide sequence

Length: 1,051

>KH2012:KH.C3.762.v1.A.SL2-1
TTAGTGAAAATTAATCGGACAAATATACGAAATGTTAATTCACCAATGCGTCTTCCTTCT
GACATGTCTCAGCCTGGTTAAGCTTGTGATATCACGGACAAGGCATGTTGTGTTCTGGGA
CAGAAGCATAAACTCAAGTTTGACGACCGAGCTTCGCCTTCAAGTACAGATAAACGAGTG
GATGGACATCCTGTGCCCCAAACCTGCCCGTAACGACGAAAAGAGGGGGGAGGAGTTATA
CATTGATGTATTCAACGTCACAGCAGCGCAGTATCATCGGTGTAACACACAAAAAATTCA
ACGAGTTTTAAGGTGTTCTGACCCGAAAAGAGAAATTAAACTGACGACAAAATTTCAAGA
GAGAAGTCCCTCGCCGCTTGGATTTGTGTTTCGACCTGGACAGTCATACTACTACATTTC
AAAACCATCAAAAGGCGGAACAAGAGGCTGCTCTACTGACACCTTGCGGTTGGTTGTAGA
GGTTGAATCGCAACATGGTCGTGTGGAAGAAAACAAACATACAAGATTTGACCCCTGGCT
AGATCAATCTGAGTTTGGTATGAAACACAACAAGCGTCATCATCACTTGAAAAACGCAGA
GAATGAATTGGAGAAACGCGAACCACAAGAACCAGTTGTGCTTTCGCAGAAGAACTCTGC
TGCCCCACCTGACGGAGGCAATTCTGCGGTTGGAATTCACTCGAGGAGACACGACACTCG
ACTGTTAGCTCTGATCACAAGTTCGCTGCTGATGGTGTTGTTTACGAAGTGGGTGTGATG
ACGTGGTTTGGGCAATTCAATACACGGTGTGCACACTTGTGAGACGACAGCAACGCTCTC
GACCATCCAAGGCGGAGAATTGTTCTTCAAGGGCCCTGGTGCGCGGCACTTACGGTATAA
GTGCTGGCAAACTTTACAAACACACTTTGCTTCTTTACCTAGTTCGTGACAGTCGTTCGC
TTTTACTTGTACCGGCCGGACAATACAATCTAAAGTTTTTTTTTATTTTTTTATTTTCTT
TTGTGTCGCTACAATACATATTGATTCCACG

InterProScan

PANTHER
Ephrin (IPR031328) - T[9-252] 1.0E-102
Gene3D
Cupredoxin (IPR008972) - T[27-175] 1.3E-31
ProSiteProfiles
Ephrin_RBD (IPR001799) - T[30-159] 50.803
SUPERFAMILY
Cupredoxin (IPR008972) - T[30-162] 7.3E-36
Pfam
Ephrin_RBD (IPR001799) - T[31-159] 1.3E-30
CDD
Ephrin-A_Ecto (IPR034252) - T[31-160] 1.118E-60
ProDom
Ephrin_RBD (IPR001799) - T[40-147] 2.0E-12
PRINTS
Ephrin_RBD (IPR001799) - T[50-67] 4.3E-8 - T[111-123] 4.3E-8 - T[124-135] 4.3E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value