- Transcript 'KH2012:KH.C8.649.v1....' >
- Transcript 'KH2012:KH.L8.11.v1.A...' >
- Transcript 'KH2012:KH.C3.773.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.773.v1.A.ND1-1
Possible name(s)
TBX21; TBX4; TBX5
Gene model
Location
KhC3 [1,442,970 / 1,447,966]
Amino acid sequence
Length: 821
>KH.C3.773.v1.A.ND1-1
VRYYLSHIVMAFSEVQYPAQHCAVGGQQFQGSLQYFGSMAPNYAGMSQQHKQWPTNQDFN
ANENYQSHNFMQQIQPRPSPNGQNQMWNANQRCDANVYNPHHLAPMINNASYPQQHGFNR
QRVNSAASDGCPTPQPNHWMAAQQSPTMWSPSGMSDPSRSRQPSLSDGGQLTPDNFYQTQ
NHQYQINQQQRSNHPYQPNYHVGPPGVSGSYMRTLSPTSSNPNSPPLLPMLTSHSMQPNP
IMMSHRQPSQPVNNQIQTPIGPSTSKVSGSDWELECMGVKIKLASAELWKHFENVTTEMV
ISKHGRRMFPVLEYDVSGLNPGKLYNFFVDFVLANDYVWKYMDQKWQATGLASAEEPGFH
PGQRVYIHHESPALGDFWNKKGAGFGKMKLSNHLHDEKEKIITLRTLHKYQPRLHIVEVD
HRNPTLQSNLRTFVLPKTTFMTVTLYHDTDVAQLKINLNPFARSFRSSCPKPVDAGNSSS
NSSSMSQTSSPLTSSDDADTSAIPEWTETDPVGHNPSLIVKIENPVQGIDIEKAKKFLNK
QLSVMSQLVQKSEELERNSSLNKNQEAKPRQVIEIPDPNNDEAPGESLEELLKPQTVHHF
PPQSSEIKPLSENKKNPTSTATSLADYQLLNVDRCFPPNAVAPPSEALPFDPNQLRQRHQ
KEQGQSENLPTFFDCTYYREQAGASKINLETKQDPSSTNTPHLPVIYVPSSTNHQPTSND
VITVASPSQAPTITSQSTPITHASPTRSEGTLFPTLPTLSPNCLRDMLLGEVSAENFASS
SSKRKHHDDEDEDDDDVFFNSPGDFDFLSAQPNKRGCYYGA
Nucleotide sequence
Length: 2,672
>KH2012:KH.C3.773.v1.A.ND1-1
ACACCTACGGTGCACAAGGTTCTAAGTTATTTAAGTTTCTCAAAAGTGAAACCTAAGTTC
GTTACTATTTAAGCCATATTGTGATGGCTTTTTCGGAAGTCCAGTATCCCGCACAGCACT
GTGCTGTCGGCGGGCAACAGTTTCAGGGAAGTCTTCAATATTTTGGCTCAATGGCCCCGA
ACTATGCGGGGATGAGTCAGCAGCACAAGCAATGGCCGACCAACCAAGATTTCAACGCGA
ACGAAAATTACCAATCTCACAACTTCATGCAACAGATTCAACCTCGGCCTTCGCCAAATG
GCCAAAACCAGATGTGGAACGCCAACCAGCGGTGTGATGCTAACGTGTACAACCCACACC
ATTTGGCGCCAATGATCAATAATGCATCTTACCCGCAACAGCACGGGTTTAACCGACAGA
GGGTAAACAGCGCTGCTAGCGATGGGTGTCCTACTCCTCAGCCCAACCACTGGATGGCAG
CACAGCAAAGCCCCACGATGTGGTCACCATCTGGAATGAGTGATCCGTCCAGATCTCGCC
AGCCAAGTCTCAGCGATGGCGGCCAACTTACTCCGGACAACTTTTATCAAACACAAAACC
ATCAATACCAGATAAACCAGCAGCAGAGGAGTAACCATCCGTATCAACCAAACTATCATG
TTGGTCCTCCTGGTGTGAGTGGTTCATATATGAGGACGCTCTCACCAACTTCTTCCAACC
CCAACTCGCCCCCATTACTTCCAATGCTGACGTCACACTCGATGCAACCGAATCCGATTA
TGATGTCACACAGGCAACCATCACAGCCAGTGAACAATCAAATCCAAACACCCATTGGTC
CATCGACATCAAAAGTTAGTGGGAGCGACTGGGAATTGGAATGCATGGGAGTTAAAATCA
AACTGGCAAGCGCAGAATTATGGAAACACTTTGAGAATGTCACAACTGAAATGGTGATCA
GTAAACATGGCAGGAGAATGTTTCCGGTTCTGGAATATGACGTCAGCGGTTTGAATCCAG
GAAAACTTTATAACTTCTTTGTTGATTTTGTTCTGGCTAACGACTACGTATGGAAATACA
TGGACCAGAAATGGCAAGCTACCGGTTTAGCTTCAGCTGAGGAACCAGGATTCCACCCTG
GTCAACGTGTTTACATTCACCACGAATCCCCAGCACTTGGCGACTTCTGGAACAAAAAGG
GAGCTGGGTTTGGGAAGATGAAACTGAGCAATCATCTTCACGATGAAAAGGAAAAGATAA
TCACACTCCGAACATTACACAAATACCAACCTCGCCTTCACATCGTTGAAGTGGATCACA
GGAACCCAACTTTACAATCCAATCTTCGAACTTTCGTTCTTCCTAAAACAACCTTTATGA
CTGTTACACTTTATCATGATACAGATGTTGCACAGTTGAAAATCAATTTGAATCCTTTTG
CGAGATCATTTAGAAGTTCGTGCCCAAAACCGGTCGACGCTGGAAATTCATCTTCCAACT
CCTCTTCAATGTCGCAAACGTCATCACCACTGACGTCATCAGATGACGCCGACACGTCGG
CCATTCCAGAATGGACCGAAACAGACCCAGTAGGCCACAATCCGAGCCTGATCGTTAAAA
TTGAGAATCCAGTCCAAGGCATCGATATTGAAAAGGCGAAAAAGTTTTTAAATAAACAAC
TTAGTGTGATGTCACAATTGGTACAAAAAAGCGAGGAGCTTGAACGCAACTCATCCTTAA
ACAAAAACCAAGAAGCAAAACCTCGTCAAGTGATCGAAATACCAGACCCCAACAATGACG
AAGCACCCGGGGAGTCTTTGGAGGAGTTGTTGAAGCCACAAACAGTTCATCATTTCCCCC
CACAGTCGTCAGAAATAAAACCACTTTCTGAGAATAAGAAAAATCCCACCAGTACAGCAA
CTTCGTTGGCGGATTACCAACTGCTCAATGTAGATAGATGCTTTCCACCTAATGCTGTAG
CGCCACCAAGCGAAGCTTTGCCGTTCGACCCCAATCAATTAAGACAGCGCCACCAAAAAG
AACAAGGACAAAGCGAGAACCTTCCAACTTTTTTCGATTGTACATACTACCGTGAACAAG
CCGGTGCTTCAAAGATTAATCTTGAAACCAAACAAGACCCCTCCTCCACAAATACGCCTC
ATCTTCCAGTTATTTACGTTCCTTCCTCAACCAACCACCAACCTACTTCAAATGACGTCA
TTACAGTTGCGTCACCGTCTCAGGCGCCAACTATTACGTCACAATCCACACCTATAACCC
ACGCTTCCCCCACTCGAAGTGAGGGCACGTTGTTTCCTACTTTACCTACATTATCACCGA
ACTGCCTCCGAGACATGCTGCTCGGTGAAGTCTCGGCAGAAAATTTCGCGTCGTCATCAT
CGAAACGAAAGCATCATGACGATGAGGATGAAGACGATGATGACGTCTTCTTTAACTCAC
CTGGTGATTTTGATTTTCTTTCTGCACAGCCAAATAAGCGTGGTTGTTATTATGGTGCTT
AAATCGCTAACGTTTAACAGCTACTTTCAATCGTACCTAAAGTTCAAACTGTGCCTTTTA
CTTCTTGTTGCTTGTTTCATTTTAACAAGATATGTATTTTTTGAAATGTGATTTTATTTC
CGCGTCAAATAAACCCAGTATAATAATACATC
| PANTHER |
TF_T-box (IPR001699) - T[10-166] 2.6E-88 - T[174-687] 2.6E-88 - T[692-755] 2.6E-88 |
| Gene3D |
T-box_sf (IPR036960) - T[270-467] 1.6E-61 |
| SMART |
TF_T-box (IPR001699) - T[278-472] 9.7E-66 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[279-466] 1.99E-59 |
| Pfam |
TF_T-box (IPR001699) - T[281-466] 2.7E-58 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[283-467] 57.78 |
| PRINTS |
TF_T-box (IPR001699) - T[296-320] 7.1E-28 - T[366-379] 7.1E-28 - T[383-392] 7.1E-28 - T[403-417] 7.1E-28 - T[438-451] 7.1E-28 - T[459-467] 7.1E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX4_HUMAN | 41.395 % | 168 | 1.98E-44 |
| TBX5_HUMAN | 45.078 % | 167 | 2.87E-44 |
| TBX21_HUMAN | 42.714 % | 166 | 1.23E-43 |