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  1. Transcript 'KH2012:KH.C3.776.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.776.v1.A.SL2-1

Possible name(s)

NUP93

Location

KhC3 [2,162,277 / 2,169,333]

Sequences

Amino acid sequence

Length: 829

>KH.C3.776.v1.A.SL2-1
KFHNTMSGVAFDDILQQAEQLNTGLDGGAELPRVQRNIQQLLDAGQRLRSKTSTAQDSAQ
PQINAALLLSSKGQDVPKISDRLKTLTSASETFEPLDVVGDTDIEGFLRNERENAILAVV
EEQKQRTFLDVEKRHWQTRLSEWDTEKQQLLNKLIGADGSLNFSREVSEHMSTSVYKTSG
NVSVNPRSTMDQWELNYARQVHIYNDRILDGGIHLNLADLCQAAAEKMKDVNVTALWKMV
KCVTDVQASIGSSLISRRTSKPMLHNLVNQALTYLEKAYLDYMQTCVYARPHIAQLGGAP
GTINLVKSFLRVQPANTVQGYEDGDVDGAPLWAVIFYCMRSGDLDAAVEVVKHNENIIPE
FSVWMQEYVREGKKLSSSSENKMKIQYKRSVRTSPDPYKTAVYCIVGRCDINDVHGEVAQ
KAEDYLWLKLSQVVVDESSAHPDVLTLSRFQKLLVEDYGESHFNAMSNPLLYFQILFLTC
QFEKAIEFLSRFENLRSHATHVALALHSHELLLTADSLHAKMITTEAADESPLTVVERLN
LSRLVMLYTRKFEITDPREALNYFHFLRNIQTDGQSLFIHCTSELVRETGEFEMLLGRLN
ADGSRKPGAVDKYCAGDTKLLIAKVASDTEAKGLNEDAVYLYDLCGKHDQTLALLNRLLS
PVISSSDNSHPDRARLKSMALAIAERYRNQSVETSRNVRSTFHLLLDLLVFFDLYHANRV
EQALDVVNELQMLPSTMEQVQSKVSMFKTYTDEIRQSISDILLATMTLLTKRCKLQQNLN
KSVTTKSGDSVCTNARRYARSLITFAGMLPYHLPGDATARLVQLEVQMT

Nucleotide sequence

Length: 2,689

>KH2012:KH.C3.776.v1.A.SL2-1
GATTTGGTTTTGAAAGTTTCACAATACGATGTCTGGTGTTGCGTTTGATGATATTTTGCA
ACAGGCTGAGCAGTTGAACACTGGATTAGATGGAGGAGCCGAACTACCCAGGGTACAGAG
GAACATACAGCAACTGCTTGATGCGGGTCAGCGACTTCGATCCAAAACATCCACTGCACA
AGATAGTGCCCAACCTCAGATTAACGCTGCCCTGCTGCTCAGTTCTAAAGGACAGGATGT
TCCAAAAATTTCTGACCGTTTAAAAACTTTAACTTCTGCTTCGGAAACTTTTGAGCCGCT
AGATGTGGTTGGTGACACCGATATTGAAGGTTTTCTGAGAAATGAACGAGAGAATGCCAT
ACTTGCTGTTGTGGAAGAACAAAAACAAAGAACATTCTTGGATGTTGAGAAGAGACACTG
GCAGACAAGATTGAGTGAATGGGATACAGAGAAGCAACAGTTACTAAACAAATTGATTGG
TGCGGATGGTTCATTAAACTTCAGCAGAGAGGTGTCTGAACACATGTCCACCAGTGTCTA
TAAAACCTCGGGAAATGTGAGCGTGAACCCAAGGAGCACCATGGACCAATGGGAGCTTAA
CTATGCCAGACAGGTCCACATATACAATGATAGAATTTTGGATGGTGGTATTCATTTAAA
TCTCGCTGATTTGTGCCAAGCTGCTGCCGAAAAAATGAAGGACGTGAATGTAACTGCACT
GTGGAAAATGGTGAAATGTGTGACAGACGTACAAGCTTCTATCGGTTCTTCTCTTATTTC
TCGTCGAACATCTAAACCAATGCTTCACAATCTGGTCAACCAAGCATTGACTTACTTGGA
GAAAGCTTATCTGGATTACATGCAAACTTGTGTGTATGCACGTCCCCACATTGCTCAGCT
AGGTGGCGCACCTGGGACTATCAATTTAGTCAAAAGTTTTCTGCGGGTTCAGCCGGCCAA
CACTGTTCAGGGATATGAAGATGGAGATGTGGATGGTGCTCCTTTATGGGCCGTCATCTT
CTACTGCATGAGGAGTGGGGATTTAGATGCGGCTGTTGAGGTTGTTAAACACAATGAGAA
TATAATCCCGGAGTTCAGTGTGTGGATGCAGGAGTATGTGAGGGAAGGGAAGAAATTATC
TTCATCTTCTGAGAATAAAATGAAGATTCAATATAAAAGAAGTGTAAGGACATCACCAGA
TCCTTATAAAACAGCAGTTTACTGTATCGTTGGACGATGTGACATCAATGATGTTCATGG
GGAAGTTGCTCAGAAAGCTGAAGATTATTTGTGGCTTAAATTATCGCAGGTTGTAGTAGA
TGAATCAAGTGCCCACCCTGATGTGTTGACGCTATCCAGGTTCCAGAAGCTTCTTGTTGA
AGATTATGGTGAAAGTCATTTTAATGCAATGTCTAACCCACTGCTGTATTTCCAAATTCT
TTTCCTGACATGTCAGTTTGAAAAAGCGATTGAATTTCTATCACGGTTTGAAAATCTTCG
AAGCCACGCAACACACGTCGCGCTTGCATTACACAGTCACGAGTTGTTACTTACTGCTGA
TTCTCTACATGCAAAGATGATCACCACAGAAGCTGCTGATGAATCGCCCCTCACAGTTGT
GGAGCGATTAAACTTATCAAGATTAGTAATGTTGTACACACGTAAGTTTGAGATAACTGA
TCCACGCGAGGCACTCAACTATTTCCATTTCTTGAGAAATATTCAAACTGATGGTCAATC
ACTCTTTATTCACTGCACCAGTGAACTGGTTCGTGAAACTGGAGAGTTCGAGATGTTACT
TGGAAGGTTAAATGCTGATGGCAGTCGTAAACCTGGTGCTGTGGATAAATATTGTGCTGG
TGATACCAAACTTCTTATAGCGAAGGTTGCCTCAGATACTGAAGCCAAAGGTTTGAATGA
AGATGCAGTTTATTTATATGATCTTTGTGGAAAACATGACCAAACCTTAGCTCTTCTTAA
CAGATTATTAAGTCCAGTCATCAGCAGCTCAGATAATTCACATCCTGATCGTGCCAGACT
TAAGTCAATGGCGCTCGCAATAGCTGAGAGATACAGAAACCAGTCTGTTGAAACTTCCCG
CAACGTTCGTTCAACTTTTCATCTCCTTCTTGATCTTTTGGTGTTCTTTGATCTTTACCA
CGCTAACCGTGTTGAACAAGCACTAGATGTCGTGAATGAGCTACAGATGCTTCCATCTAC
AATGGAACAGGTTCAATCAAAAGTTTCGATGTTTAAAACATATACGGATGAAATTCGTCA
AAGTATTTCCGACATCTTGCTAGCTACAATGACATTACTAACAAAACGGTGTAAACTGCA
ACAAAACCTTAATAAGTCGGTGACGACCAAAAGTGGGGATTCTGTATGTACCAACGCACG
ACGATATGCTCGATCTCTGATTACATTTGCTGGTATGTTGCCTTACCATTTACCAGGTGA
TGCAACTGCTCGGCTTGTACAACTGGAGGTACAGATGACATGAAACAACGAAACTCGTTC
CAACAATCATAATTTTTCTACAATAAACTCTCGTATAATGCGCTTGTTTGTTATTGCTTG
CAAGGGCAATATAGGGCGTCTGTTAAGTTGCAACAAACATCAGCGGAGTTGGCATTGAGT
GTTGAATTTGAACTATGCTTAAATTTAAACAACAAACCGATAAGTTTTT

InterProScan

PANTHER
Nucleoporin_int_Nup93/Nic96 (IPR007231) - T[7-828] 6.4E-269
Pfam
Nucleoporin_int_Nup93/Nic96 (IPR007231) - T[230-814] 2.3E-175

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NUP93_HUMAN 47.052 % 751 0





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