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  1. Transcript 'KH2012:KH.L153.32.v3...' > 
  2. Transcript 'Boleac.CG.SB_v3.S298...' > 
  3. Transcript 'KH2012:KH.C3.781.v2....'

Transcript Model

Transcript Id

KH2012:KH.C3.781.v2.A.SL1-1

Possible name(s)

DES; GFAP; VIM

Gene model

KH2012:KH.C3.781

Location

KhC3 [5,307,356 / 5,311,913]

Sequences

Amino acid sequence

Length: 449

>KH.C3.781.v2.A.SL1-1
FYDPGNFFSDKMQSPAGQSGQSSSYRVVTSSRTTTSSSNNAAGSPLRLGDIQPQGRMSYG
MYSSSYDGGYSGGVGSVYVSDKDLQDLGGEQGVQFRNMRSGEKEELKGLNNRFASYIERV
RFLEQQNKLLEAQLRQLSVKYESKLGELYASEVRRLKAIIDSLNTDKALIDAELDHMRQD
VTDLRREHDTSVSEREELERELNNLRGNVDECTISRVDLERQLMTLREELDFENLAHTEI
VNELKSQLVTDHVRVQVDTHGPDLSDLLRDIRAQYDLAAKRNREESEEWYSGKLNDLNAK
VSQDANRLKDAQGELSEMRTRVGTHTTQIESLRSNKDYLERQLADVEERFSRDINGYQDQ
IAELQSQLEKIKAEMAERLREYQDLLAVKLGLDFEISTYHKLLEGEEFRLQGVSPGLSSG
GTTYSLRKVVEEYESAYKNAQSKSGRKSP

Nucleotide sequence

Length: 1,837

>KH2012:KH.C3.781.v2.A.SL1-1
AAAATCACCAGACCCGCCCAAGGTAGCTTTTAAACTTAGTTTTACGACCCCGGCAACTTT
TTCTCGGACAAGATGCAGTCACCGGCAGGACAAAGTGGACAGTCGTCTTCATACAGAGTT
GTGACTTCATCGCGAACAACAACTAGCTCTTCCAACAACGCTGCAGGTTCTCCACTTCGA
CTCGGCGATATTCAACCCCAAGGAAGAATGTCTTACGGTATGTACTCATCAAGTTACGAT
GGCGGATACAGCGGAGGTGTAGGATCAGTGTATGTAAGTGATAAGGACTTGCAAGATCTT
GGTGGTGAACAAGGCGTTCAGTTTAGAAACATGAGATCTGGAGAGAAAGAAGAACTCAAG
GGCTTGAACAACCGATTCGCATCCTACATCGAGCGAGTTCGTTTCCTTGAACAACAGAAC
AAGTTGCTCGAGGCTCAGCTTCGTCAGCTTTCCGTGAAATACGAATCTAAGCTGGGAGAG
CTTTATGCCAGTGAGGTTCGTCGCTTGAAGGCCATCATCGACTCGTTGAACACTGACAAG
GCACTCATTGATGCTGAACTTGATCATATGAGACAGGATGTTACTGATTTGAGAAGAGAG
CACGACACGTCAGTAAGTGAACGTGAAGAACTTGAAAGGGAATTAAACAATTTGAGAGGA
AATGTTGACGAATGTACGATCAGCCGTGTGGATTTGGAGAGACAGCTCATGACGTTGAGA
GAAGAACTTGACTTCGAAAACCTTGCCCACACTGAGATCGTGAACGAACTCAAGTCCCAA
CTGGTCACCGACCACGTAAGAGTCCAAGTAGATACTCATGGACCTGACCTATCCGATCTC
CTCCGTGACATTAGAGCACAATACGACCTCGCTGCGAAACGAAACAGAGAAGAGTCGGAA
GAATGGTACAGTGGAAAGTTGAACGACCTGAACGCTAAGGTTTCCCAAGATGCCAACCGT
CTTAAAGACGCACAGGGAGAACTGAGCGAAATGAGAACCCGCGTCGGCACACACACCACG
CAAATTGAGTCCCTTCGTTCCAACAAAGATTACCTGGAGAGACAACTCGCTGACGTGGAA
GAAAGATTCAGTCGCGACATAAATGGTTACCAAGATCAAATCGCAGAACTCCAGTCTCAG
TTGGAGAAGATCAAAGCCGAGATGGCGGAGAGACTTCGAGAATACCAAGACCTGCTGGCG
GTTAAACTAGGTTTGGACTTCGAAATCAGCACATACCACAAACTGCTGGAAGGCGAGGAG
TTCAGACTGCAGGGGGTGTCGCCTGGTTTGAGCAGTGGTGGAACAACCTACTCGCTCAGA
AAAGTCGTCGAAGAATACGAGAGTGCATACAAAAACGCTCAGTCGAAGAGTGGAAGAAAA
TCGCCTTGAAAAACTATGAGAAAAATACACAAGCTCTGCCGTCTATTAACCAGTTTTACT
GTCGCATAGCAACTATATCATATACTCGTTACTAATCACTTATACCCTTGATTATATATA
CCATATACACCCTACCCGAAGTAATAAATGTACATAGAGTGAAATAATGTTTAATATCAA
AACCACTTTTCGCCTATAACTGTCAAATATATTGATGCCATTTATTCAAAGAAATTTATG
GATAATATCGTTAGTTTGCCAAACTTTTTATTAAAAATTATATTTAGCTCTATCTGATCG
CATATGGAACCTCGCCCTGTGGTTATTTTCACATTGTTGTAAAGCACTATCATGCACTTA
AACAGCTTTTCTGCTTAAAATGGCAATTAATGGATTTTAACTTTGCGCTTATGTAAAATG
GTGGTGAACTTGGTCAAATAAACGGCATGACAATATG

InterProScan

PANTHER
IF (IPR001664) - T[30-422] 7.3E-103
SMART
IF (IPR001664) - T[101-409] 3.2E-115
Pfam
IF (IPR001664) - T[102-409] 3.1E-89
PRINTS
Keratin_I (IPR002957) - T[198-221] 4.9E-7 - T[350-376] 4.9E-7
ProSitePatterns
Intermediate_filament_CS (IPR018039) - T[396-404] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIME_HUMAN 40.482 % 285 1.06E-91
GFAP_HUMAN 42.901 % 249 4.42E-78
DESM_HUMAN 42.587 % 231 1.07E-70