Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.79.v2.R.SL5-3

Possible name(s)

CALM1; CALM2; CALM3

Gene model

KH2012:KH.C3.79

Location

KhC3 [6,655,839 / 6,657,714]

Sequences

Amino acid sequence

Length: 159

>KH.C3.79.v2.R.SL5-3
NKPSKFLKQKMADQLNEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ
DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM
TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTNK

Nucleotide sequence

Length: 746

>KH2012:KH.C3.79.v2.R.SL5-3
ATTCGCTTAAATCATAACAATTTTAGTATTTTAAAATAAACCGTCCAAATTTTTAAAGCA
GAAAATGGCAGACCAACTGAACGAAGAACAGATCGCAGAATTCAAGGAAGCGTTCTCCCT
TTTCGACAAGGACGGCGATGGTACAATCACAACCAAGGAGCTGGGAACCGTCATGAGGTC
TTTGGGACAAAACCCAACTGAAGCTGAGCTTCAGGACATGATCAATGAAGTTGATGCTGA
CGGCAACGGAACCATAGATTTTCCCGAGTTTTTGACAATGATGGCCCGAAAAATGAAGGA
CACCGACAGTGAAGAGGAAATTAGAGAAGCATTTAGGGTTTTCGATAAGGACGGCAATGG
CTTCATCTCGGCGGCTGAGCTGCGTCATGTTATGACCAATCTTGGTGAAAAGCTAACAGA
CGAAGAAGTTGATGAAATGATCAGAGAAGCCGACATTGACGGCGATGGCCAAGTCAACTA
TGAAGAGTTCGTAACAATGATGACGAATAAATAATGAAACCAGAAGGCATGGAGCGAATG
TGTTTAATATTGAGACCAGCAATGCATTGTAATATTTATTATTAACTTCGGTCGCAGTGC
TGATTTGTAAATTTCGTGTTCTCGATTGTATTTAAACTTTTAAGTTATTCAATTCGTGCT
GTTGTATTTATGTTGGCAATTGTGTATTCTGTTTCGAATCTGTGTCATGTTTCACAATTC
GCCTGAATAAAAAAATAACAAGTTAA

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[4-157] 3.48E-59
ProSiteProfiles	EF_hand_dom (IPR002048) - T[18-53] 17.303 - T[54-89] 14.792 - T[91-126] 17.972 - T[127-159] 15.155
SMART	EF_hand_dom (IPR002048) - T[22-50] 8.5E-9 - T[58-86] 7.2E-9 - T[95-123] 5.8E-9 - T[131-159] 2.9E-9
CDD	EF_hand_dom (IPR002048) - T[22-84] 3.0905E-22 - T[95-157] 1.23226E-23
Pfam	EF_hand_dom (IPR002048) - T[23-83] 1.7E-15 - T[93-156] 2.9E-18
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[31-43] . - T[67-79] . - T[104-116] . - T[140-152] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CALM1_HUMAN	97.315 %	291	5.71E-103
CALM3_HUMAN	97.315 %	291	5.71E-103
CALM2_HUMAN	97.315 %	291	5.71E-103