Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.79.v7.R.SL3-3

Possible name(s)

CALM1; CALM2; CALM3

Gene model

KH2012:KH.C3.79

Location

KhC3 [6,655,839 / 6,663,713]

Sequences

Amino acid sequence

Length: 157

>KH.C3.79.v7.R.SL3-3
NKKYLLRRMAEQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM
INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN
LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTNK

Nucleotide sequence

Length: 723

>KH2012:KH.C3.79.v7.R.SL3-3
GTTATATAGATTGTTAGAACAAAAAATACTTATTGCGCAGAATGGCAGAACAACTGACAG
AGGAACAAATCGCTGAATTCAAGGAAGCGTTCTCCCTTTTCGACAAGGACGGCGATGGTA
CAATCACAACCAAGGAGCTGGGAACCGTCATGAGGTCTTTGGGACAAAACCCAACTGAAG
CTGAGCTTCAGGACATGATCAATGAAGTTGATGCTGACGGCAACGGAACCATAGATTTTC
CCGAGTTTTTGACAATGATGGCCCGAAAAATGAAGGACACCGACAGTGAAGAGGAAATTA
GAGAAGCATTTAGGGTTTTCGATAAGGACGGCAATGGCTTCATCTCGGCGGCTGAGCTGC
GTCATGTTATGACCAATCTTGGTGAAAAGCTAACAGACGAAGAAGTTGATGAAATGATCA
GAGAAGCCGACATTGACGGCGATGGCCAAGTCAACTATGAAGAGTTCGTAACAATGATGA
CGAATAAATAATGAAACCAGAAGGCATGGAGCGAATGTGTTTAATATTGAGACCAGCAAT
GCATTGTAATATTTATTATTAACTTCGGTCGCAGTGCTGATTTGTAAATTTCGTGTTCTC
GATTGTATTTAAACTTTTAAGTTATTCAATTCGTGCTGTTGTATTTATGTTGGCAATTGT
GTATTCTGTTTCGAATCTGTGTCATGTTTCACAATTCGCCTGAATAAAAAAATAACAAGT
TAA

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[2-155] 5.68E-60
ProSiteProfiles	EF_hand_dom (IPR002048) - T[16-51] 17.303 - T[52-87] 14.792 - T[89-124] 17.972 - T[125-157] 15.155
CDD	EF_hand_dom (IPR002048) - T[20-82] 1.94777E-22 - T[93-155] 7.58632E-24
SMART	EF_hand_dom (IPR002048) - T[20-48] 8.5E-9 - T[56-84] 7.2E-9 - T[93-121] 5.8E-9 - T[129-157] 2.9E-9
Pfam	EF_hand_dom (IPR002048) - T[21-81] 1.7E-15 - T[91-154] 2.8E-18
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[29-41] . - T[65-77] . - T[102-114] . - T[138-150] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CALM1_HUMAN	97.315 %	291	6.48E-103
CALM3_HUMAN	97.315 %	291	6.48E-103
CALM2_HUMAN	97.315 %	291	6.48E-103