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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'Cisavi.CG.ENS81.R26....' > 
  4. Transcript 'KH2012:KH.C12.200.v1...' > 
  5. Transcript 'KH2012:KH.C3.82.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C3.82.v2.A.nonSL3-1

Possible name(s)

MAP1LC3A; MAP1LC3B; MAP1LC3B2

Gene model

KH2012:KH.C3.82

Location

KhC3 [780,014 / 781,947]

Sequences

Amino acid sequence

Length: 123

>KH.C3.82.v2.A.nonSL3-1
SKMPGDRTFKQRRSFEDRVKDVSEIRKEHPNKIPVIIERYQGEKQLPVLDKTKFLVPDHV
SMCDLVRIIRRRLQLSPSQAFFLLVNGHSMVSVSDAVSEIYSEQQDEDGFLYMTYASQET
FGT

Nucleotide sequence

Length: 691

>KH2012:KH.C3.82.v2.A.nonSL3-1
TGTTAAGGTCAATTTATATTGTGACGTCATAAGCAGATAAAGCAAGATGCCCGGAGACCG
AACTTTCAAACAAAGACGAAGCTTCGAGGACCGAGTAAAAGATGTGAGTGAAATACGGAA
GGAACATCCAAATAAAATACCAGTTATTATTGAGAGATACCAAGGAGAGAAACAGTTGCC
GGTGTTGGACAAAACCAAGTTCCTGGTCCCTGATCATGTTTCTATGTGTGACCTTGTGAG
AATTATTAGACGGAGATTACAACTGAGTCCAAGCCAAGCCTTTTTCCTTCTCGTTAACGG
GCATAGCATGGTTAGTGTATCAGACGCAGTGTCAGAAATATACAGCGAACAACAAGATGA
AGACGGTTTCTTATACATGACATACGCCTCACAAGAAACCTTTGGTACCTAAACTGTAAA
AAAGTTTAAAAATTCAAAAACTGCCAACAAAAACAACGCAAACTCATACTTGTAAAGCTA
AAATGTAAAAAAATAGCTAGTAGTGTGTGTTTGTGTATTATGTTATAACCGGTATTAACA
CAAACATTGAAAACAAAAAATGTTTAGTAATCAGTACAATGTAGCCTGGGGTTATATGAT
GATTGTTTTGTTAATTACATGTACTGGATGTGTATAACATTTTCTTTCTCGCATGAAATA
TCTTGTACATAATATATACATACTTGGTAAT

InterProScan

PANTHER
Atg8-like (IPR004241) - T[3-122] 7.8E-64
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[8-122] 3.88E-41
CDD
Atg8-like (IPR004241) - T[9-122] 1.00597E-55
Pfam
Atg8-like (IPR004241) - T[18-122] 1.2E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MLP3B_HUMAN 75.833 % 199 8.85E-68
MLP3A_HUMAN 76.667 % 199 1.64E-67
MP3B2_HUMAN 75 % 196 2.59E-66