- Transcript 'Cisavi.CG.ENS81.R166...' >
- Transcript 'KH2012:KH.C3.869.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.869.v1.A.SL1-1
Possible name(s)
ASCC3; HFM1; SNRNP200
Gene model
Location
KhC3 [996,386 / 1,006,744]
Amino acid sequence
Length: 2,144
>KH.C3.869.v1.A.SL1-1
NMADASARSLQYEYKANSNLVLQADRSLIDRRPRDEPTGEVLTLQGKLTEIKMGDRAQRT
KPPQMEERKAKRRKRDEDEKFQANLRGRSLLSDGVDEMVGIVYKPRTKETRETYEILLSF
IQAAIGDQPRDILCGAADEVIAVLKQEKSRDKERRNEIQLLLGQLEDSRYHVLVNLGKKI
TDFGAESDLKATDENIDETYGVNVQFESDDEDGDDNKYGEVREASDVEDEVEEGVEANVD
TVVSANLTNEAGGINVAKNKDLHPRDIDAYWLQRNLSKVYDDAIVSQQKAEEVLEILKTA
GDDLQCENQLVHLLGFNQFNFIKTLRLHRQMILYCTLLASAQSLDAKQEIEKKMESEADL
KMILEQLHDTEKEDIIREEQDRRERLRRSKVDADLKATDAENVKSEDVYQPSQKSIDLED
LEFNQGSHLMANKKCQLPDGSYRKQRKGYEEVYVPALKPKPFKNKEKLVSIESLPKYAQN
AFEGFKSLNRVQSKLADTALNSDENILLCAPTGAGKTNVALLCMLKEIGKHINVDGSIKL
DNFKVIYIAPMKSLVQEMVGSFGKRLANYGVKVAELTGDHQLCKEEINATQVIICTPEKW
DIITRKGGERTYTQLVRLIIMDEIHMLHDSRGPVLESIVARTIRSIETTQEDVRLVGLSA
TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQHYIGITEKKPMKRFQVMNEIVYEKVV
DNAGRNQVLIFVHSRKETGKTARAIRDMCIDNDTLGQFLREGSASTEVLRTEAEQVKNME
LKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTSTLAWGVNLPAHTVIIKGTQV
YNPEKGRWVELGALDVLQMMGRAGRPQYDTKGEGVLITTHNELQYYLSLLNQQLPVESQM
ISCLPDALNAEIVLGNVQNIKDAVNWLGYTYLYIRALRQPSLYGVESPEDDPMLQQRRID
LAHAAVTMLAKNNLVKYDRKSGQLQVTDLGRIASHYYCTNESMATYNQLLKPTLSEIELF
RVFSLSSEFKYITVREEEKLELNKLLERVPIPIKESIEEASAKVNVLLQAYISQLKLEGF
ALMADMVYVTQSAGRLIRALYEIVLYRGWAQLADKCLSLSKMINRRMWQSMTPLRQFKKV
PDEVVKKIEKKNFPWERFYDLGHNEIGELIRMPKMGKLLHRLIHQFPKMELSVHVQPITR
STLRVELTITPDFQWDEKIHGNSEGFYIFVEDVDGEVVLHHEFFLLKSKYASDEHVVNFF
VPVFEPLPPQHFIRIISDRWIGSETQLPVSFRHLILPEKYPPPTELLDLQPLPISALRNS
EYEALYENDFPCFNPIQTQVFNAIYNGDENVFVGAPTGSGKTVCAEFALLHALNLDPDSR
CVYVTPVEAVADLIYKDWRKKFEVSLGKRVVLLTGETSTDLRLISRASIIIATSERWDVI
SRRWKQRKNVHTVSLFIVDEIHLIGGESGPELEVVCSRMRYIASQLDKNIRIIALGSSLA
NAKDVAQWLGCTNMHTFNFHPNVRPVPLELHIQGFNISHTQSRLLSMAKPVYNAITKHSP
KQACIIFVPSRKQCKLTAVDILTYTAADASAQRFLHCNESELGAYLEHVKDATLKETLSN
GVAYLHDGSTELERTVVEQLFSSGAVQVLVASRSLCWGLNLAAHLVVIMDTQHYNGKIHA
YVDYPVTDILQMIGRANRPLKDEEGKCVIMCQSSKKDFFKKFVYEPLPVESHLDHCLHDH
FNAEIVTKIIENKQDAVDYLTWTFLYRRMSQNPNYYNLQGVSHRHLSDSLSELVENTLAD
LEQSKCISIEDEMDITPLNLAMIAAYYYINYTTIELFSMSLNAKTKIRGLIEIISNAAEY
ESIPIRHHEDSTLKQLLPKVQHKPQNLRFTDPHIKTNLLIQAHLSRLQLPAELQSDTEQI
LGKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSRDSYLKQLPHFSADLIKQCT
QKEIESVFDILEMEDSDRSQLLKMNESQMADVARFCNRFPNIELNYEVQSEDDLHAGTPV
VINVVLEREDEVAGPVIAPFFPQKREEGWWVVVGDPKTNSLISIKRLTLQQKAKVKLDFI
PPSAGSHSYTLYFMSDAYMGCDQEYKLLLNVRESAGESSASDSD
Nucleotide sequence
Length: 6,745
>KH2012:KH.C3.869.v1.A.SL1-1
ATTAAAACTTTATATATACCTGTGTATTAACAAGTACTAGTTAAATAAAGTTTCAATAAA
GATTTAAAACATGGCGGATGCCTCGGCACGATCGTTGCAATATGAATACAAAGCAAATTC
GAACTTGGTGTTACAAGCTGATCGATCTTTGATTGATCGGCGACCAAGAGATGAACCAAC
TGGAGAAGTCCTTACACTGCAGGGTAAGCTGACTGAAATTAAAATGGGAGATCGTGCTCA
AAGAACGAAACCTCCACAAATGGAAGAGCGAAAAGCAAAACGAAGAAAGCGTGACGAAGA
TGAAAAGTTTCAAGCAAATCTTCGTGGTAGAAGTTTGCTCTCGGACGGTGTGGATGAAAT
GGTTGGGATTGTTTACAAACCTCGTACGAAAGAAACCCGGGAAACCTATGAGATTCTACT
CAGTTTCATACAAGCTGCGATTGGTGATCAACCCAGAGATATCTTATGTGGTGCGGCTGA
TGAGGTCATTGCTGTGTTGAAACAAGAAAAGTCAAGAGACAAGGAAAGAAGAAATGAAAT
TCAGCTTCTACTTGGTCAACTAGAAGACTCTCGTTATCATGTCTTGGTAAATTTAGGTAA
AAAAATCACTGACTTTGGTGCTGAAAGTGACTTAAAAGCAACGGATGAAAATATTGATGA
AACGTATGGAGTTAATGTTCAGTTCGAATCTGATGATGAAGATGGTGATGATAATAAGTA
CGGGGAAGTCCGTGAAGCTTCGGATGTTGAAGATGAAGTGGAAGAAGGAGTTGAAGCAAA
TGTTGATACGGTTGTGTCCGCTAATCTTACAAATGAAGCTGGTGGTATTAATGTGGCTAA
AAATAAAGATCTTCATCCTAGAGATATCGATGCTTACTGGCTGCAAAGAAATTTAAGTAA
GGTGTATGATGATGCTATTGTTTCTCAGCAGAAAGCAGAAGAAGTATTGGAAATTCTTAA
GACAGCTGGGGATGACCTTCAGTGTGAAAACCAGCTTGTTCATCTGCTTGGATTTAATCA
GTTTAACTTTATTAAGACTTTACGACTTCATAGGCAGATGATTTTGTATTGTACCTTGCT
TGCTAGTGCTCAAAGTCTTGATGCAAAACAAGAAATTGAGAAAAAAATGGAAAGTGAAGC
TGACCTCAAAATGATCTTGGAGCAACTTCACGACACTGAAAAAGAAGATATTATCCGTGA
AGAGCAAGATCGAAGGGAAAGACTCCGACGTTCGAAAGTTGATGCGGATTTGAAAGCAAC
TGATGCAGAAAATGTGAAAAGTGAAGATGTTTATCAACCAAGTCAGAAATCTATTGATCT
TGAAGATCTTGAGTTTAACCAAGGTTCCCATTTAATGGCGAATAAGAAATGTCAGTTGCC
AGATGGTTCCTATCGAAAGCAAAGAAAAGGATATGAAGAAGTATATGTACCTGCTTTAAA
ACCAAAACCATTTAAAAATAAGGAAAAACTTGTTAGCATTGAAAGTTTGCCTAAATATGC
TCAAAATGCTTTTGAGGGGTTCAAATCACTAAACAGGGTGCAAAGCAAGCTTGCAGACAC
AGCTTTAAACAGTGATGAAAATATTTTGCTTTGTGCTCCAACTGGTGCAGGAAAAACCAA
CGTTGCACTTCTGTGCATGTTAAAGGAGATAGGAAAACATATCAACGTGGATGGATCAAT
AAAACTGGATAACTTTAAAGTGATTTACATCGCTCCGATGAAGTCTTTGGTTCAAGAGAT
GGTTGGAAGCTTTGGAAAGAGACTTGCCAACTACGGTGTTAAAGTCGCTGAGCTCACTGG
TGACCATCAGTTGTGTAAGGAAGAAATAAATGCGACTCAGGTTATCATATGCACCCCTGA
GAAGTGGGACATCATTACACGTAAAGGAGGTGAAAGAACATACACTCAGTTGGTTCGTTT
GATAATCATGGATGAAATACATATGCTGCATGATAGTCGTGGCCCTGTTCTTGAATCAAT
TGTTGCACGAACAATCAGATCAATTGAAACCACCCAGGAAGATGTGAGGTTGGTTGGATT
GTCAGCTACGCTACCAAACTATGAAGATGTTGCTACTTTCCTCCGTGTTGATCCAGCAAA
AGGTTTATTTTACTTTGACAATAGCTTTCGCCCCGTTCCCCTCGAACAACATTACATTGG
TATCACTGAAAAGAAACCAATGAAGAGATTCCAAGTTATGAATGAAATTGTTTATGAGAA
AGTGGTTGACAATGCAGGCAGAAACCAGGTTTTGATTTTTGTTCATTCCCGTAAAGAAAC
TGGTAAAACTGCCAGAGCAATCCGGGATATGTGTATTGATAACGACACATTGGGGCAGTT
CTTAAGAGAAGGTTCAGCATCAACTGAAGTTTTACGTACAGAAGCTGAACAAGTTAAGAA
TATGGAATTGAAAGATCTTCTGCCATACGGGTTTGCCATTCATCATGCTGGTATGACTCG
TGTTGACAGAACGCTTGTTGAAGATTTGTTTGCGGATCGACACATACAAGTTTTAGTTTC
CACATCTACCTTGGCATGGGGCGTCAACTTACCTGCTCACACTGTTATAATAAAAGGAAC
ACAAGTGTATAACCCTGAAAAGGGTCGATGGGTTGAACTTGGTGCATTGGATGTTTTACA
AATGATGGGTAGGGCAGGTCGACCACAGTATGATACTAAAGGTGAAGGTGTCCTGATAAC
TACACACAATGAGCTTCAATATTATTTGTCTCTTTTGAATCAACAGTTACCTGTTGAAAG
TCAAATGATCTCCTGTCTCCCCGATGCTTTGAATGCTGAGATAGTGCTTGGGAATGTACA
GAATATAAAAGATGCTGTTAATTGGTTGGGTTACACATACCTTTATATTCGTGCACTGAG
ACAACCATCACTGTATGGAGTGGAATCACCAGAAGACGATCCGATGCTTCAACAACGAAG
AATTGATTTAGCTCATGCAGCTGTCACAATGCTGGCCAAGAACAACTTAGTGAAATATGA
CAGAAAATCTGGTCAGCTGCAAGTTACTGATCTTGGACGAATTGCAAGTCATTATTACTG
TACAAATGAAAGTATGGCCACATACAATCAACTTCTAAAACCAACATTGAGCGAAATTGA
GTTGTTCCGCGTATTTTCTCTTTCATCTGAATTTAAATATATCACTGTCAGGGAAGAAGA
AAAATTAGAGTTGAACAAACTTTTGGAAAGAGTGCCGATTCCTATTAAAGAAAGCATTGA
GGAAGCTTCAGCCAAAGTCAATGTGCTACTACAAGCTTACATATCCCAACTTAAATTAGA
AGGATTTGCTTTAATGGCGGATATGGTTTATGTCACGCAAAGTGCAGGAAGACTTATCCG
TGCTTTGTATGAAATTGTTCTTTATCGAGGTTGGGCTCAGCTTGCAGATAAATGCCTCTC
ACTGAGTAAGATGATTAACCGAAGAATGTGGCAGTCAATGACCCCACTGCGGCAATTTAA
AAAAGTCCCAGATGAAGTTGTGAAGAAAATTGAAAAGAAAAATTTTCCATGGGAACGGTT
TTATGATTTGGGTCATAATGAGATTGGAGAGTTAATTCGGATGCCAAAGATGGGAAAACT
TCTTCATAGGTTAATTCATCAGTTTCCCAAGATGGAATTATCAGTCCATGTTCAACCTAT
CACCAGATCAACCTTACGAGTGGAATTGACGATCACACCAGATTTTCAATGGGATGAAAA
GATTCATGGGAACTCTGAGGGATTCTATATATTTGTGGAAGATGTTGATGGTGAAGTAGT
CTTGCATCATGAGTTCTTTCTTTTAAAAAGCAAATATGCATCTGATGAGCATGTTGTCAA
CTTCTTTGTTCCGGTGTTCGAGCCTCTTCCTCCTCAACATTTCATCAGGATCATATCGGA
TCGATGGATCGGATCAGAAACCCAACTTCCAGTTTCATTCAGACATCTCATCTTGCCAGA
GAAGTATCCGCCACCAACCGAGCTTCTTGACTTGCAACCTCTTCCTATTAGTGCACTAAG
AAACTCAGAATACGAAGCCCTATATGAGAATGACTTTCCTTGTTTTAACCCAATTCAAAC
ACAAGTTTTTAACGCAATCTACAATGGAGATGAAAATGTATTCGTTGGAGCTCCTACTGG
TAGCGGGAAAACGGTTTGTGCTGAATTTGCTTTGCTGCATGCGTTGAATCTTGACCCTGA
TTCAAGGTGCGTTTATGTCACACCCGTCGAAGCTGTTGCTGATTTAATTTACAAAGACTG
GCGTAAAAAGTTTGAAGTCAGTTTGGGGAAACGAGTTGTCCTGTTAACAGGAGAAACAAG
CACGGATCTTCGTTTAATATCAAGAGCATCAATCATCATCGCTACTTCAGAGAGATGGGA
TGTTATTTCTCGACGATGGAAGCAACGGAAGAATGTTCACACTGTATCGCTCTTCATTGT
TGATGAAATTCATTTGATTGGAGGGGAGAGTGGACCTGAACTTGAGGTTGTTTGTTCTCG
AATGCGGTACATCGCATCCCAGCTTGATAAGAATATTCGAATCATTGCACTTGGATCTTC
GTTGGCAAATGCTAAAGATGTCGCTCAGTGGTTAGGATGTACAAACATGCATACATTCAA
TTTTCATCCAAATGTACGACCAGTGCCGCTTGAACTTCACATTCAAGGGTTCAACATCAG
CCACACTCAGTCAAGACTTCTCAGCATGGCAAAACCTGTTTACAACGCTATAACAAAGCA
CTCACCAAAGCAAGCCTGCATTATATTTGTGCCTTCCAGAAAGCAGTGTAAGCTTACTGC
AGTTGATATTTTAACTTATACTGCAGCAGATGCCTCGGCACAGAGGTTTCTTCACTGCAA
TGAATCGGAGTTAGGTGCTTATTTGGAACATGTTAAGGATGCTACGTTGAAAGAAACACT
GAGCAATGGAGTTGCTTATTTACACGATGGTTCAACTGAGTTGGAACGTACTGTTGTGGA
ACAACTGTTTTCTTCAGGTGCAGTTCAAGTGCTTGTTGCTTCCCGTAGTTTGTGCTGGGG
ATTAAATCTCGCCGCTCATTTGGTTGTGATCATGGATACCCAGCATTACAATGGCAAGAT
TCATGCATATGTTGATTACCCTGTGACAGATATATTGCAGATGATTGGCCGTGCCAATCG
ACCATTAAAGGACGAAGAGGGAAAATGTGTGATTATGTGTCAAAGCTCAAAAAAAGACTT
TTTCAAGAAGTTTGTTTACGAGCCACTGCCAGTAGAATCCCACCTTGACCACTGCTTGCA
TGATCACTTTAATGCAGAGATTGTCACCAAAATTATTGAAAACAAACAAGATGCTGTTGA
TTACTTGACCTGGACTTTCCTTTACAGAAGAATGAGTCAAAATCCAAACTATTACAACTT
GCAGGGTGTCTCGCATCGACATTTATCTGACAGTTTATCTGAATTGGTAGAGAATACTTT
AGCTGATCTTGAGCAATCAAAATGCATTTCAATTGAAGATGAAATGGATATCACTCCGCT
AAATTTGGCTATGATTGCCGCTTACTATTACATTAATTACACCACAATTGAGTTATTCAG
CATGTCTCTCAATGCAAAAACAAAGATACGTGGTTTGATTGAGATCATTAGTAACGCTGC
AGAATATGAGAGCATCCCTATTCGACACCATGAAGACAGCACACTGAAACAACTTTTACC
AAAAGTTCAGCACAAGCCACAAAACCTAAGGTTTACTGATCCACATATTAAAACCAACCT
CTTGATCCAAGCTCATCTTTCAAGACTTCAGTTACCAGCAGAACTACAATCTGACACCGA
ACAAATACTTGGAAAAGCTATCCGATTAATACAAGCCTGTGTTGATGTATTGTCTTCAAA
TGGCTGGCTTTCTCCAGCTCTTGCTGCAATGGAGCTTGCACAGATGGTAACACAAGCAAT
GTGGAGTCGAGATTCCTATTTAAAACAACTGCCACACTTCAGTGCCGACCTCATTAAACA
ATGCACTCAAAAGGAGATTGAAAGCGTGTTCGATATTCTTGAGATGGAAGATTCAGATCG
AAGTCAACTCCTCAAGATGAATGAGTCGCAGATGGCAGATGTTGCGAGGTTTTGCAACAG
GTTCCCAAACATTGAACTGAATTATGAAGTTCAATCTGAAGATGATCTGCACGCTGGCAC
CCCCGTGGTCATTAATGTTGTGTTAGAAAGGGAAGATGAAGTAGCTGGTCCAGTGATCGC
TCCATTCTTTCCACAGAAGCGTGAAGAAGGTTGGTGGGTGGTGGTGGGTGACCCGAAGAC
AAACAGCCTTATTTCAATCAAACGACTTACACTTCAACAAAAAGCAAAAGTGAAATTAGA
TTTCATTCCTCCTTCTGCTGGTTCACATTCCTATACTTTATATTTCATGAGTGATGCTTA
CATGGGATGTGACCAGGAGTATAAACTTCTACTTAACGTGCGAGAATCTGCTGGTGAAAG
TAGTGCCAGTGATTCTGATTAAAATTATTAGTTTTTAATCTGCATTATTCGTTTTTTTTT
TTTCGCTAAATGGGATTTGCTAGCTAAAATATGTCAATTTATAATGTACATATCTAAAAT
TCAGTTTTACCAAATTATGAACTGCTGTGTACCAGTTTTTTGATTAGTTAGCTAACTTTA
TGCGATGGTAATTTCAATCATACACATGGTAAATTGTATATACTCAAACCAATTGATTGT
ATATAATTAAAACACAAGTTGTAAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[429-673] 1.64E-44 - T[683-895] 1.63E-49 - T[1218-1510] 5.67E-48 - T[1519-1728] 8.6E-43 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[484-695] 4.0E-32 - T[1329-1533] 1.6E-23 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[490-665] 1.1E-24 - T[1335-1496] 8.6E-22 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[497-680] 22.178 - T[1342-1517] 19.632 |
| SMART |
AAA+_ATPase (IPR003593) - T[502-819] 0.075 - T[1347-1538] 1.1 |
| CDD |
Helicase_C (IPR001650) - T[691-865] 1.03253E-15 - T[1551-1710] 6.22375E-9 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[691-928] 12.092 - T[1550-1757] 9.911 |
| Pfam |
Helicase_C (IPR001650) - T[723-865] 4.1E-7 - T[1551-1698] 3.1E-6 |
| SMART |
Helicase_C (IPR001650) - T[775-867] 1.8E-17 - T[1612-1700] 1.1E-11 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[895-997] 1.44E-7 - T[1728-1828] 1.41E-7 |
| SMART |
Sec63-dom (IPR004179) - T[986-1291] 3.4E-128 - T[1817-2129] 1.3E-112 |
| Pfam |
Sec63-dom (IPR004179) - T[987-1290] 1.2E-90 - T[1817-2127] 2.3E-78 |
| Gene3D |
C2_domain_sf (IPR035892) - T[1186-1294] 6.5E-47 - T[2020-2142] 3.5E-46 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[2021-2132] 1.68E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ASCC3_HUMAN | 43.119 % | 1521 | 0 |
| U520_HUMAN | 76.783 % | 3460 | 0 |
| HFM1_HUMAN | 32.054 % | 328 | 1.77E-91 |