- Transcript 'KH2012:KH.C3.87.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.87.v1.A.nonSL23-1
Possible name(s)
ATP5F1B; ATP6V1A; ATP6V1B1
Gene model
Location
KhC3 [6,534,321 / 6,539,286]
Amino acid sequence
Length: 523
>KH.C3.87.v1.A.nonSL23-1
FGNMLNTARSCLKAFQSASPLVNNGARSATNLINRDYSAKAAAKETAAPGVLKGEVVAVI
GPVVDVHFEEGRPRILNALEVEGRDTRLVLEVAQHLGQNTVRTIAMDSTERLVRGQKVVD
VGGPIRVPVGPGTLGRIINVIGEPIDERGPVDTEHFAGIHAPPPDLIDTGGAQEILETGI
KVVDLLAPYAKGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYSVFAGVGERTREGNDLY
HEMIDSGVISLTDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDMEGQDVLLFIDN
IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDL
TDPSPATTFSHLDATTVLSRQVSELGFYPAVDPLESSSRIMDPNIVGIEHYDCARRVKKI
LQDHKSLQDIIAILGMGELSQEEKLTVTRARKIQRFLSQPFQVAETFTGTPGKLVSLKDT
MIGFNRILEGELDHLPEGAFYMVGDIQEVLTKADQIAADMAED
Nucleotide sequence
Length: 1,824
>KH2012:KH.C3.87.v1.A.nonSL23-1
AACAACTAGTTCTTACATTTTATAGCAGGTACGGGTATAAGTGGTTGCCCTTTCAAACAG
GACCCGTTATATCCCTTGATTTGGCAATATGTTGAACACGGCAAGGAGTTGTTTGAAGGC
TTTCCAATCGGCCTCTCCATTGGTGAACAATGGCGCACGATCCGCAACAAATCTGATCAA
TCGCGATTACAGTGCGAAAGCTGCGGCCAAAGAAACTGCAGCACCTGGTGTATTGAAGGG
AGAGGTAGTGGCCGTCATTGGGCCAGTAGTGGACGTTCATTTTGAGGAGGGAAGACCAAG
GATCCTCAATGCCCTTGAAGTTGAAGGAAGAGACACCAGACTTGTGCTGGAAGTTGCACA
GCATCTTGGTCAAAACACCGTCCGAACCATCGCTATGGATTCCACTGAGAGATTGGTGAG
AGGTCAAAAGGTCGTGGATGTTGGTGGACCAATCAGAGTCCCGGTTGGTCCAGGAACCCT
CGGTAGAATCATCAATGTTATTGGGGAGCCTATTGATGAACGTGGACCAGTGGATACTGA
ACACTTTGCCGGCATCCACGCGCCACCCCCAGACCTGATTGATACTGGTGGTGCTCAAGA
GATTCTTGAAACTGGAATCAAGGTTGTGGATCTCCTTGCTCCCTATGCAAAGGGAGGAAA
GATTGGTTTGTTTGGTGGTGCTGGTGTCGGCAAGACTGTCTTCATCATGGAACTTATCAA
CAATGTAGCGAAAGCTCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAACGAACAAG
AGAAGGGAATGATCTTTACCATGAGATGATTGATTCCGGTGTCATCTCACTCACTGATAA
AACATCAAAGGTAGCACTTGTATACGGACAAATGAACGAACCACCGGGTGCACGTGCACG
AGTCGCACTCACTGGTTTAACTGTTGCTGAATATTTCCGTGATATGGAGGGACAAGACGT
GCTTCTGTTTATTGACAACATTTTCAGGTTCACCCAAGCTGGTTCTGAGGTATCTGCTTT
GCTTGGTCGTATCCCATCAGCTGTCGGTTACCAACCCACCCTGGCTACTGACATGGGTAC
CATGCAGGAGAGAATCACAACCACCAAGAAAGGATCCATCACATCTGTACAGGCCATCTA
CGTACCTGCTGACGATTTGACTGATCCAAGTCCAGCCACCACTTTCTCTCACTTGGATGC
AACAACCGTGTTGTCCCGTCAAGTATCAGAACTTGGTTTCTACCCCGCTGTGGACCCACT
TGAATCATCCTCTCGTATCATGGACCCCAACATTGTTGGTATTGAACATTATGATTGCGC
AAGGAGGGTGAAGAAGATTTTACAGGATCACAAGTCACTCCAGGACATCATTGCTATCCT
TGGTATGGGTGAATTATCACAGGAAGAGAAACTTACAGTGACCCGGGCTCGCAAGATCCA
ACGTTTCTTGTCACAACCTTTCCAAGTGGCTGAAACCTTCACTGGTACCCCAGGCAAGTT
GGTGTCTTTGAAAGATACAATGATTGGATTCAACAGGATTCTTGAAGGTGAACTCGACCA
TTTACCTGAGGGAGCTTTCTACATGGTTGGTGACATTCAAGAAGTTCTTACTAAAGCTGA
CCAAATTGCTGCAGATATGGCTGAAGATTAAAGAAACTTTTTATTTATATTTGTTCCGTG
TTTCTGGAAGGTGCCACCAAAATTCCACATCTCCTGTCGTGCCATTTCTATTTCAAGTTC
AACACGTTTGGAAACCAATAGTTTCATTTTAATTTGAAAAGTCTTATATCTTGTGAAATA
AAAAGAGTTCCTTCGGATATGAAA
| Hamap |
ATP_synth_F1_bsu (IPR005722) - T[51-516] 55.126 |
| SUPERFAMILY |
ATPase_F1/V1/A1_a/bsu_N_sf (IPR036121) - T[52-124] 4.45E-23 |
| TIGRFAM |
ATP_synth_F1_bsu (IPR005722) - T[53-515] 8.5E-242 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_N (IPR004100) - T[56-122] 5.4E-22 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[126-403] 3.63E-89 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[179-398] 3.2E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[191-378] 5.0E-5 |
| ProSitePatterns |
ATPase_a/bsu_AS (IPR020003) - T[389-398] . |
| Gene3D |
ATPase_F1/V1_b/a_C (IPR024034) - T[401-521] 3.2E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VATB1_HUMAN | 25 % | 108 | 3.17E-25 |
| ATPB_HUMAN | 80.825 % | 789 | 0 |
| VATA_HUMAN | 29.204 % | 117 | 5.0E-28 |