- Transcript 'KH2012:KH.C3.87.v8.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.87.v8.A.SL7-1
Possible name(s)
ATP5F1B; ATP6V1A; ATP6V1B1
Gene model
Location
KhC3 [6,534,321 / 6,537,779]
Amino acid sequence
Length: 368
>KH.C3.87.v8.A.SL7-1
FAGIHAPPPDLIDTGGAQEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVFIMELINN
VAKAHGGYSVFAGVGERTREGNDLYHEMIDSGVISLTDKTSKVALVYGQMNEPPGARARV
ALTGLTVAEYFRDMEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM
QERITTTKKGSITSVQAIYVPADDLTDPSPATTFSHLDATTVLSRQVSELGFYPAVDPLE
SSSRIMDPNIVGIEHYDCARRVKKILQDHKSLQDIIAILGMGELSQEEKLTVTRARKIQR
FLSQPFQVAETFTGTPGKLVSLKDTMIGFNRILEGELDHLPEGAFYMVGDIQEVLTKADQ
IAADMAED
Nucleotide sequence
Length: 1,281
>KH2012:KH.C3.87.v8.A.SL7-1
CTTTGCCGGCATCCACGCGCCACCCCCAGACCTGATTGATACTGGTGGTGCTCAAGAGAT
TCTTGAAACTGGAATCAAGGTTGTGGATCTCCTTGCTCCCTATGCAAAGGGAGGAAAGAT
TGGTTTGTTTGGTGGTGCTGGTGTCGGCAAGACTGTCTTCATCATGGAACTTATCAACAA
TGTAGCGAAAGCTCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAACGAACAAGAGA
AGGGAATGATCTTTACCATGAGATGATTGATTCCGGTGTCATCTCACTCACTGATAAAAC
ATCAAAGGTAGCACTTGTATACGGACAAATGAACGAACCACCGGGTGCACGTGCACGAGT
CGCACTCACTGGTTTAACTGTTGCTGAATATTTCCGTGATATGGAGGGACAAGACGTGCT
TCTGTTTATTGACAACATTTTCAGGTTCACCCAAGCTGGTTCTGAGGTATCTGCTTTGCT
TGGTCGTATCCCATCAGCTGTCGGTTACCAACCCACCCTGGCTACTGACATGGGTACCAT
GCAGGAGAGAATCACAACCACCAAGAAAGGATCCATCACATCTGTACAGGCCATCTACGT
ACCTGCTGACGATTTGACTGATCCAAGTCCAGCCACCACTTTCTCTCACTTGGATGCAAC
AACCGTGTTGTCCCGTCAAGTATCAGAACTTGGTTTCTACCCCGCTGTGGACCCACTTGA
ATCATCCTCTCGTATCATGGACCCCAACATTGTTGGTATTGAACATTATGATTGCGCAAG
GAGGGTGAAGAAGATTTTACAGGATCACAAGTCACTCCAGGACATCATTGCTATCCTTGG
TATGGGTGAATTATCACAGGAAGAGAAACTTACAGTGACCCGGGCTCGCAAGATCCAACG
TTTCTTGTCACAACCTTTCCAAGTGGCTGAAACCTTCACTGGTACCCCAGGCAAGTTGGT
GTCTTTGAAAGATACAATGATTGGATTCAACAGGATTCTTGAAGGTGAACTCGACCATTT
ACCTGAGGGAGCTTTCTACATGGTTGGTGACATTCAAGAAGTTCTTACTAAAGCTGACCA
AATTGCTGCAGATATGGCTGAAGATTAAAGAAACTTTTTATTTATATTTGTTCCGTGTTT
CTGGAAGGTGCCACCAAAATTCCACATCTCCTGTCGTGCCATTTCTATTTCAAGTTCAAC
ACGTTTGGAAACCAATAGTTTCATTTTAATTTGAAAAGTCTTATATCTTGTGAAATAAAA
AGAGTTCCTTCGGATATGAAA
| TIGRFAM |
ATP_synth_F1_bsu (IPR005722) - T[3-360] 7.0E-201 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[3-248] 2.88E-78 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[24-243] 1.3E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[36-223] 5.0E-5 |
| ProSitePatterns |
ATPase_a/bsu_AS (IPR020003) - T[234-243] . |
| Gene3D |
ATPase_F1/V1_b/a_C (IPR024034) - T[246-366] 1.6E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VATB2_HUMAN | 24.841 % | 87 | 9.38E-19 |
| ATPB_HUMAN | 84.615 % | 625 | 0 |
| VATA_HUMAN | 29.204 % | 117 | 6.2E-29 |