- Transcript 'KH2012:KH.C13.28.v1....' >
- Transcript 'KH2012:KH.C2.669.v1....' >
- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'KH2012:KH.C8.32.v1.A...' >
- Transcript 'KH2012:KH.C3.879.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.879.v1.C.SL2-1
Possible name(s)
SOCS6; SOCS7
Gene model
Location
KhC3 [4,857,692 / 4,861,469]
Amino acid sequence
Length: 411
>KH.C3.879.v1.C.SL2-1
SKSAVMKRFRNLSVNKRKKHLDTAVPEIDNVEPQSKDDNVPINQKAKFKFRIGKTLFRTK
SAKKSSSSNESERNSTIAENKNGPSSSLTDVQSNQDSPIQVNNSNFLNDSTQERSCQTDE
LSNGQAGNVQNITPKQHINGHAGGDQLHSSNYTCNNFTSQGTSENSPNENLYQLPSNDTH
TNHSGKLSQLQEEDTVVPDSTDVYQTPESLDHGIMGATAAPVSPDVNHTFHTLTSLHVPP
TMRKNTLTNEFKKLAQQGWYWGPLTRSEAEDKLNETPNGSFLVRDSSDERYLLSLSFRSF
GRTLHTRIEHSSGNFSFYENNRMQSYDSVVDLIMDSVRDSQEAGIFCYSRTRDPLATTYP
VRLIHPVSRLSQVRTLQYLCRFVIRQYTRIDHIESLPLPNPVKGYLNESYF
Nucleotide sequence
Length: 1,989
>KH2012:KH.C3.879.v1.C.SL2-1
CCTGGTGTTGTCTGTACACAAAGTTTTGCATAAATTAATAAAACTTGCCCCACTGTTGAA
AATCAAAGTAAAGCAAATCAGCGGTTATGAAAAGATTTCGTAATTTATCAGTAAACAAAA
GAAAAAAACACTTAGACACTGCAGTTCCAGAAATTGACAACGTGGAACCCCAGAGTAAAG
ACGACAATGTCCCAATCAATCAAAAAGCAAAGTTCAAATTTCGTATTGGAAAAACACTTT
TTCGGACAAAGAGTGCAAAAAAGTCATCTTCCTCAAATGAATCTGAAAGAAACAGTACCA
TTGCTGAAAACAAAAATGGACCAAGTTCTTCTTTAACTGATGTTCAATCTAATCAAGATA
GCCCAATACAAGTAAACAATTCTAACTTTTTGAATGATTCAACTCAAGAAAGAAGTTGTC
AAACTGATGAACTAAGCAATGGTCAGGCTGGAAATGTTCAAAACATAACTCCGAAGCAGC
ACATAAATGGCCATGCAGGGGGTGACCAACTACATTCTTCAAATTACACATGCAACAATT
TTACAAGCCAAGGGACCTCAGAAAATTCTCCAAACGAAAACCTGTATCAATTACCCTCAA
ATGACACTCACACCAATCATAGTGGGAAACTATCCCAATTACAAGAAGAAGACACTGTTG
TACCGGATTCCACTGATGTTTATCAAACTCCAGAGAGCTTAGACCATGGTATAATGGGTG
CTACAGCTGCTCCGGTATCTCCAGATGTTAACCACACCTTTCATACCCTTACAAGTCTCC
ATGTTCCACCTACCATGAGGAAAAACACGCTCACCAACGAGTTCAAGAAACTTGCCCAAC
AGGGTTGGTACTGGGGGCCGCTGACAAGGTCAGAAGCTGAAGATAAACTGAATGAAACTC
CAAATGGATCTTTCCTTGTCAGGGATAGTTCTGATGAAAGATATTTGCTATCACTGAGTT
TTCGTTCTTTTGGAAGAACTCTTCACACTAGAATTGAACATTCTTCTGGTAATTTCAGCT
TCTATGAAAACAACAGAATGCAGTCTTATGACTCGGTAGTAGATTTGATCATGGATTCTG
TGAGAGATTCCCAGGAGGCCGGAATATTCTGTTATTCAAGAACTAGGGACCCTCTTGCTA
CAACTTATCCTGTTCGATTAATTCACCCTGTGTCACGCCTCTCACAGGTGCGCACTCTGC
AATACTTGTGTCGGTTCGTCATACGTCAGTACACACGTATTGACCATATTGAAAGCTTGC
CGTTGCCAAACCCCGTCAAGGGTTATCTCAACGAATCTTACTTCTAAATGTTCCTATTGG
CCTTCGTTACGACCCTTCGTAACTCGTTTAATCATATAGTTTATATTTTAGCCGTATCTA
TTTAACGAGGTGCTGTAAACAACACCATTATTTGCGCGAAAACTTTACGTGTCGCACTGT
TATAACCGTGTATTTTTTTACAGAAATCTTTTTTTCATATATCGGTCAATTTCAGCTCTG
TACATTGAACGTCGCTTTGTAAATCCGCGTGCTACTTTTATGCATTCCGTTTTTAATTCT
ACTGTAGCTAATTCAACCGTGTAACAGCCCAGAGGCACTTAGCAAGCACGAGTGGCCCTG
GTTCTAGAGAGCAGCTTTGGTTGTGCTATAGACACTCCACCCGAAGCGAGTATTACCTTA
CTTATTGTTTATCTGTACGAGGGACGAAGGGCTCTTCACTCTGTCGCGCGACCTAATTTT
TGTCGGATTACTCATCGCGTCCGTGTACGATTACAGCATTAGGTTGTACCGTAAAGGCCC
GATTTCAAGCGATACCCAGCGAATCTATCGTATCACTGTGATAAGGATGCACGCCACCGA
ACTGAACGATCTGCCATTAAAACTAATCGTCTCTAATCTTTTTAACCCGTCGTTACGTTA
TGTGTGTTCCAGTAAATATTTGCCCATGCGGTTCATTCTTTCTTCCAATAAACAAGCTTC
TCAATAGAA
| PANTHER |
SOCS6 (IPR028421) - T[9-103] 1.3E-129 - T[125-411] 1.3E-129 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[241-411] 5.4E-49 |
| CDD |
SOCS6_SH2 (IPR035865) - T[248-348] 9.58532E-68 |
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[249-369] 2.56E-24 |
| SMART |
SH2 (IPR000980) - T[257-342] 7.7E-21 |
| Pfam |
SH2 (IPR000980) - T[259-333] 6.0E-13 |
| ProSiteProfiles |
SH2 (IPR000980) - T[259-367] 16.173 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[362-411] 15.715 |
| SMART |
SOCS_box (IPR001496) - T[367-410] 6.0E-15 - T[373-409] 9.6E-11 |
| CDD |
SOCS6_SOCS (IPR037345) - T[371-411] 2.01749E-20 |
| Pfam |
SOCS_box (IPR001496) - T[373-407] 1.3E-9 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[373-409] 4.05E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOCS6_HUMAN | 68.235 % | 247 | 1.18E-76 |
| SOCS7_HUMAN | 47.024 % | 166 | 8.37E-46 |
| SOCS2_HUMAN | 34.637 % | 98.2 | 5.4E-24 |