- Transcript 'KH2012:KH.C11.535.v1...' >
- Transcript 'KH2012:KH.C11.535.v1...' >
- Transcript 'KH2012:KH.C3.905.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.905.v1.C.SL1-1
Possible name(s)
SLIT1; SLIT3; SLITRK3
Gene model
Location
KhC3 [2,012,079 / 2,016,731]
Amino acid sequence
Length: 453
>KH.C3.905.v1.C.SL1-1
SMVVLKILILCLPVVYSAHTNAVSPCDGITNCLCSSSAVNCTGAGLTSLPPTINAGKLYY
YFEENQLKTLNKNTFRHFIKAKHINAGKNRISHLGPKTFNHNKLLSQLYLDNNRITSLPA
TLFTNNHNLTLFSANFNNITSISSGLFKNCPLLSYISITNNQLAAIAPDAFTTNLVLSRL
LLEVNHLTTPMWQWIDHLKHSETFEIYLDRNPWICDCRMKQFKIEVETHSWYQRAETPKS
GKKGIASHVRCSAPPNHASMNIEAVDSLSLTCESPTILTNTSVLLAEGKPGVVTCSATGI
PVPQVWFADETGRNVTDPHPGVGNMTFNSVLTDEAGLYSCFASGWNSSGTWTLKSTPVTV
IVKSKPAAGLIITLAFILPALVIVGIVVFIRQRHKRRDGYGSLTNENGASARYDHLNDAD
VTSATVLRDSSDDEMDELVSYAKDTADEREVLV
Nucleotide sequence
Length: 2,069
>KH2012:KH.C3.905.v1.C.SL1-1
AAGCATGGTAGTTTTAAAGATTCTTATTTTGTGTTTGCCTGTGGTATACTCTGCGCACAC
AAATGCGGTTTCGCCTTGCGATGGAATCACGAATTGTTTATGTTCGTCATCAGCAGTAAA
CTGCACTGGTGCTGGTCTAACATCACTCCCCCCAACAATTAATGCGGGAAAACTATATTA
TTATTTTGAAGAAAATCAACTCAAAACTTTGAACAAAAACACATTTCGTCACTTCATCAA
AGCCAAACATATAAATGCGGGGAAAAATCGTATCAGCCATTTAGGACCGAAGACCTTCAA
CCACAACAAATTATTGTCCCAACTATATCTTGATAATAACAGGATTACAAGCCTACCAGC
AACATTGTTTACCAACAACCACAATCTCACGTTGTTTTCTGCAAACTTTAACAACATTAC
GTCAATTAGCTCCGGCTTGTTTAAGAACTGTCCACTGTTATCTTATATCAGCATTACTAA
TAACCAGCTAGCTGCAATTGCCCCAGATGCCTTCACTACTAACCTGGTGCTCAGCAGATT
GTTATTGGAAGTTAATCATCTCACGACTCCAATGTGGCAATGGATCGACCATCTGAAACA
TTCGGAAACATTTGAAATTTATTTGGATAGAAACCCTTGGATATGTGACTGCAGGATGAA
ACAGTTTAAGATTGAAGTGGAGACACACAGTTGGTATCAACGAGCAGAAACACCAAAGAG
CGGTAAGAAGGGAATTGCGTCACATGTACGGTGTTCAGCACCCCCAAACCATGCCAGCAT
GAACATTGAAGCTGTAGATTCGTTAAGTTTAACTTGCGAATCACCGACTATTTTAACCAA
CACCAGCGTTCTGCTTGCTGAGGGCAAACCGGGAGTAGTTACGTGTTCAGCAACTGGAAT
TCCCGTCCCGCAAGTCTGGTTTGCTGATGAGACTGGGCGAAATGTAACAGATCCGCATCC
AGGAGTGGGGAACATGACTTTCAATTCGGTTTTAACTGACGAAGCTGGGCTATATTCTTG
TTTCGCTTCTGGTTGGAACAGTTCAGGAACATGGACTCTAAAATCGACTCCTGTGACTGT
GATTGTAAAATCCAAGCCAGCAGCTGGATTGATTATAACACTTGCTTTCATATTGCCGGC
TCTTGTCATCGTTGGGATTGTTGTATTTATTCGGCAAAGGCATAAGCGTCGAGATGGATA
CGGTTCGCTCACAAATGAGAACGGCGCTTCTGCACGTTACGATCACTTAAACGACGCAGA
TGTGACTTCAGCCACAGTATTACGCGATAGCTCCGACGACGAAATGGACGAACTGGTGAG
CTACGCCAAAGATACCGCAGACGAAAGAGAAGTACTGGTATAGCGATACCCAATGACAAG
ACAAATATCTACGGGAAAGATTTGCGCCTATTTCAATATGGCATGTGCAGTATAGTAATA
TGACTAAGTTGGAGCTATATATATTATTTTGCTTATATTTTTGTAAAAAAAAACGCTTTT
GCTTTTGATACTCTGCTGTTGCTTTGATTATTATTAAAATATACCGGCTGGACTTTTAAA
TTAATGATAGCAAAAGATAAGCCATACTAGCTATACTTGTATGCTGGAGATTCAGAGCTC
AACTTGGTCTCCGTTTCTCAAGAGCTTTTCCTTGGTGTTCCTTTATCAAGAAAACAGTAA
ATACTTTTTATTGTAAAGTGAACGTCAGCTAACTAACTTGTTGAAATGTTGACGAAATGT
AATTTTTGCCTTCCCCTTTCTTCTGCCCGAATCCAAACAATCCACACCCGAACTTGAATA
TTTCTTTGTCATTTCCGGGATAAAAACCTGTGATGAAGAGAAAACGAAGTTCGCTTATTC
TGTTGTAAAAATTACTGGGTTTAATTCCAAGCAAATAGTAACAGTAGGTTGCACGTAAGT
GATGGAAACAGGAGGCACGTTAGTTATGTTCGAACACCAACGTATAGACAAATGAGCTGT
TTACTATTATATCTACAAACCCCAAAAATGTTGTAAATTATACTTAAATCTCACGTTTTG
AAATAAATTAAAATTTCTTTTGTTTTCTA
| Gene3D |
LRR_dom_sf (IPR032675) - T[28-129] 4.7E-17 - T[130-277] 9.0E-23 |
| Pfam |
LRR_5 (IPR026906) - T[65-173] 8.1E-10 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[104-125] 7.142 - T[128-149] 5.594 - T[152-173] 4.786 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[211-273] 1.4E-4 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[274-363] 1.92E-9 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[275-359] 9.609 |
| Gene3D |
Ig-like_fold (IPR013783) - T[278-368] 2.4E-6 |
| SMART |
Ig_sub (IPR003599) - T[280-363] 4.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 24.719 % | 86.7 | 7.12E-18 |
| SLIT3_HUMAN | 26.556 % | 83.6 | 5.52E-17 |
| SLIT2_HUMAN | 26.515 % | 83.6 | 6.49E-17 |