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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'Moocul.CG.ELv1_2.S90...'
  3. Transcript 'Haaura.CG.MTP2014.S8...'
  4. Transcript 'KH2012:KH.C10.148.v2...'
  5. Transcript 'KH2012:KH.C4.162.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.162.v1.A.SL1-1

Possible name(s)

CARF; TCF19

Location

KhC4 [3,794,191 / 3,798,096]

Sequences

Amino acid sequence

Length: 715

>KH.C4.162.v1.A.SL1-1
HTFITYTYYATMDTVEYGSNTSLESEPCIKWFPSLELAEQELYRHEVDTMCSFTLFKKKK
NDPDKRRIHWDKDNIPFFVMEFIRYQCTHGKVNRTPALVTKQLRVKKSRKTDCEACITIR
EIIKFPQFQVAPQQRSFKNKKTLISKFIKKNLDTNKDLVKCTLFRMTFPGPADHYGHEIG
KVQVGTVTNLNRLVLKYLKEIIAKGNSSVPELKQLVDKYVVEELFKDRTPPPPTNRIFYP
TDHTIRNHLYKAGIKATPHPRRKRKPKQASLALESSNTDNFDILIDATEAIQDKSVQTNR
MLELIDTIKEEMYNVTSIDALVQAEDLLQTALQVLKNSCVDTVVSDEMVVSDEMDATDIQ
GKRKMLPISNGEEPQSKFQKMYEDILSGTSQPQVFTSDSNQLTLHTNPGVNIVVKTQDKR
KSTIPRKRSSTKIVPSINLMGRNVNQPLLKIGQNTLSYVQLMTLEKSVNAVDRNCLRSFD
ETFQVGKLCDNIINSYLWQLTSRYDHVIYADTSVGYMIQHGGDVGQLWENVKKSEKSYAF
IPWKSKSQYWVMLAINIKNRKLLYLDPNQTDDIDKTQHVYEAKEFINRSLSDILGFSLTS
SATNVHKPNKGNMSPGIYVCMYAYWLTKGMSLVQPHKPVLFRKHIFDTIIGNCTLGFQNK
DNCKVCHKNIRHITGNSTLWVECSSCQQWYHAQCVGMSEEQLICDADFSCPRDLN

Nucleotide sequence

Length: 2,658

>KH2012:KH.C4.162.v1.A.SL1-1
ATTAAAAGATGAAATACTGCTTTCTTTTGAAACTTAACATACTTTTATAACTTATACTTA
TTATGCCACAATGGATACAGTAGAATATGGATCAAATACATCATTGGAGTCCGAACCCTG
TATTAAGTGGTTTCCATCATTGGAACTGGCAGAACAAGAATTATATAGGCATGAAGTTGA
TACAATGTGTTCATTTACTTTATTTAAAAAGAAGAAGAATGATCCAGATAAGCGACGCAT
ACATTGGGACAAAGACAATATACCATTCTTTGTAATGGAGTTTATTAGGTACCAATGTAC
ACATGGCAAGGTTAACCGAACTCCTGCACTTGTGACGAAGCAATTGCGTGTTAAAAAATC
AAGAAAAACAGACTGTGAAGCTTGCATTACAATTCGGGAAATTATAAAATTTCCGCAATT
TCAGGTTGCACCACAGCAGCGTAGTTTTAAGAATAAAAAAACACTTATTTCAAAATTCAT
AAAGAAAAATTTAGATACCAACAAAGATCTAGTTAAATGCACGCTATTTCGAATGACTTT
TCCTGGTCCTGCTGACCATTATGGTCATGAGATTGGAAAGGTTCAGGTGGGAACTGTAAC
AAACCTGAACCGGTTAGTTTTGAAATATCTCAAGGAAATAATCGCTAAAGGAAACTCATC
AGTGCCTGAGCTTAAGCAGCTTGTTGACAAGTATGTTGTTGAAGAACTCTTCAAAGATAG
AACTCCACCACCACCAACAAATAGAATATTTTACCCAACTGATCATACTATTCGCAATCA
TTTGTACAAAGCTGGTATTAAAGCGACACCACATCCAAGGCGCAAACGTAAACCAAAACA
AGCTTCGTTAGCGCTTGAATCCTCCAATACAGACAATTTTGATATACTTATTGATGCGAC
TGAAGCCATACAAGATAAATCAGTTCAAACTAATAGGATGCTGGAACTTATAGATACAAT
TAAAGAGGAAATGTACAATGTTACTTCAATAGATGCCTTGGTACAAGCAGAGGATCTTTT
ACAGACAGCTTTACAAGTTCTAAAAAACAGTTGCGTTGACACAGTTGTAAGTGATGAGAT
GGTTGTAAGTGATGAGATGGATGCAACTGACATACAAGGAAAAAGAAAGATGTTACCCAT
ATCAAATGGCGAAGAACCACAATCTAAGTTTCAAAAGATGTATGAAGATATTTTGAGTGG
TACATCTCAGCCACAAGTTTTTACATCAGACAGTAATCAGTTGACACTACATACAAATCC
TGGGGTGAATATTGTGGTTAAAACACAAGATAAAAGAAAATCAACAATACCAAGAAAAAG
GAGTTCAACCAAAATAGTGCCTTCAATAAATTTGATGGGTCGTAATGTAAATCAGCCACT
CCTAAAAATTGGACAAAATACACTCTCTTATGTACAACTTATGACTTTGGAAAAATCTGT
AAATGCTGTAGATAGGAATTGCCTGCGTTCATTTGACGAAACTTTTCAAGTTGGAAAGTT
ATGTGACAATATCATTAACAGTTATTTGTGGCAGCTTACCTCAAGATATGATCATGTCAT
CTATGCTGATACCAGTGTTGGATACATGATTCAGCATGGTGGAGATGTGGGACAATTATG
GGAAAACGTTAAAAAAAGTGAAAAGTCTTATGCATTTATTCCATGGAAATCAAAAAGCCA
GTATTGGGTTATGTTAGCAATCAATATCAAGAACCGCAAGCTACTATACTTGGATCCAAA
CCAAACAGATGATATTGATAAAACACAGCACGTTTATGAGGCCAAGGAATTCATCAATCG
ATCATTATCAGACATTTTAGGATTTTCTTTGACTTCAAGTGCCACCAACGTGCATAAGCC
CAATAAAGGGAATATGTCTCCTGGTATATACGTGTGCATGTACGCATACTGGCTAACAAA
AGGAATGAGCTTAGTACAACCCCACAAACCTGTATTGTTTCGGAAACATATTTTTGACAC
CATAATAGGAAATTGTACATTGGGTTTTCAGAACAAAGACAATTGCAAAGTGTGTCATAA
AAATATCAGACATATAACTGGCAACAGTACATTGTGGGTAGAGTGCTCATCTTGTCAACA
GTGGTATCATGCGCAATGTGTGGGAATGTCTGAAGAACAACTTATATGTGATGCTGATTT
TTCATGTCCAAGAGATCTGAACTGATTATTGACATTATCCCAAACCATAATTTGGTGTTC
AGTTTAAACATATAAAATGTAATGGTTTAACATGTGGTCATATATTCACATATTTAAAAT
TTACTGTGACAAATATTATAAATTGAATTTGTTGTACCATAGTTTTCTCCCATTAAAACA
AATCTGTACCTAAAATAATAAAAAGAATATATATGTAACAATGACATAAATACATTTTTT
TATGAAACAATCACTTTGTTCTGCTGTGCATGTTGCTGCTCGGTTGGGAGTGATGTTTCA
GCATTACAAGTTATTGGGTTGGTACCAGACAAAGTGTATCCCGTGTTACATGTGTATGTC
ACTTGTTCCAAGTTGGTGTGTGGTACAGCTGGTGGGAAACTAGCTTAAGGTCAAATAGGT
GGTTTTGGACAATGAATCCACCACATTCAGATTGTTTTATTTAATTTTAGAAGTTGTTAT
TACAAAGACCACTTAAAG

InterProScan

Pfam
CaRF (IPR029309) - T[65-252] 3.4E-28
Pfam
Peptidase_C48_C (IPR003653) - T[528-633] 1.1E-4
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[656-713] 1.3E-8
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[658-711] 1.26E-7
SMART
Znf_PHD (IPR001965) - T[662-714] 2.7E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value