- Transcript 'KH2012:KH.C4.182.v1....' >
- EST 'AHC0AAA222YI11_RM1' >
- Clone 'cien61666' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C4.182.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.182.v1.A.nonSL1-1
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
KhC4 [111,282 / 113,675]
Amino acid sequence
Length: 409
>KH.C4.182.v1.A.nonSL1-1
SKHKCTRLFSYKETYLFGRTEVFNNLNATMSSTMISSYSDFSENLHKDFWESAIIRTTMD
YSVLKSGFDKIDMSVSQKVIAANLTSRPALTRRHSSSMFCSASTNNAPLTGYNENALLAS
HASLETVNEEKFRSRAFSEGSSVLSQESMQDQQQSATSRYKTELCRPFEENGKCKYGDKC
QFAHGKHELRRMVRHPKYKTELCRTYHTSGFCPYGPRCHFIHNQEDVGIAKKQTQPTRIQ
SQTSVPVKINNRQLSQHQRPRDLQLFTQSASFGHMPPYSPSNSSPSIHNTQPMFGLSEVL
SPISPMPQNSTGGQFFSYCGKGSNSPVESNRRSSFSDNRQSTPPITQLDIFNRSQQPTEF
PTIDTSDDLVFDTPPTPPDSDRESATGSPKNYEQMGQRLPIFRCLSKTE
Nucleotide sequence
Length: 1,946
>KH2012:KH.C4.182.v1.A.nonSL1-1
AGCAAACACAAATGCACGAGGTTATTTAGCTATAAAGAAACTTATTTATTCGGTAGGACT
GAAGTATTTAATAATCTTAATGCCACTATGTCTTCAACTATGATCTCAAGCTATTCTGAT
TTTAGCGAGAACTTACATAAAGACTTTTGGGAGTCAGCGATTATTCGTACTACAATGGAC
TACTCAGTATTAAAAAGTGGATTTGACAAGATTGACATGAGTGTGTCCCAAAAAGTGATC
GCTGCTAATTTGACCAGTCGACCTGCCCTTACACGCCGCCACTCTTCATCTATGTTTTGT
TCAGCGTCCACAAATAACGCACCGCTGACAGGATACAACGAGAATGCTCTGCTTGCTTCG
CACGCTTCACTAGAGACGGTGAATGAAGAAAAATTCCGTAGCAGAGCTTTTAGCGAAGGC
TCGTCTGTACTAAGCCAAGAATCAATGCAAGACCAACAACAGTCCGCCACGAGCCGTTAT
AAAACCGAATTGTGTCGGCCGTTCGAGGAAAACGGAAAATGCAAATACGGCGACAAATGC
CAGTTTGCTCACGGCAAACACGAGTTACGTAGAATGGTTCGACACCCGAAATACAAAACG
GAACTTTGTCGTACGTATCACACCAGTGGTTTTTGTCCATACGGACCACGGTGCCATTTT
ATCCACAACCAAGAGGACGTTGGCATTGCTAAAAAACAAACTCAACCTACAAGAATACAA
TCGCAAACGTCAGTCCCGGTAAAGATTAATAATCGCCAATTATCTCAGCATCAAAGACCA
CGTGATCTTCAACTCTTTACACAAAGCGCATCGTTCGGCCACATGCCACCTTACTCGCCA
TCCAACAGCAGCCCAAGTATTCACAACACGCAACCCATGTTTGGATTAAGTGAAGTCTTA
TCTCCAATTTCACCCATGCCACAAAATAGTACAGGCGGTCAGTTCTTTAGTTATTGTGGT
AAAGGGAGTAATTCTCCGGTGGAATCGAACCGACGTAGCAGTTTCTCCGACAATCGTCAA
TCCACGCCACCGATCACACAACTCGATATCTTTAATCGAAGTCAACAACCAACTGAGTTT
CCGACCATCGACACAAGCGATGATCTCGTATTTGATACGCCCCCAACACCACCGGATTCC
GACCGAGAATCGGCAACTGGATCACCTAAAAACTATGAGCAAATGGGCCAAAGGTTACCA
ATCTTCCGATGCCTGTCTAAAACCGAGTGAAAAATAATCTCCTTTCATGATATTTATTCT
AATCCAAAGTTGGATATTATGCTGCACACAGACATTATTTATGTTAACACACGACCGTGT
TCCCCCAAAACCAGTACCGGCTATGTGTTTTACCTCTAGCCTTCGTAACTTTGGGAGCTT
GTGCCTTTTGATATTTTTACTGATATGCCTACTGTATTTTAACGCCATCACTGCTCACTG
ATTATGTTGCCTCAACACCGTGGATCTAATCGAGTATTTTAACTGTTTACGTGCGGTTTT
CGCCAGCATTTGTTGTGCTTAATTCAGCGGATAGTAAAACTAGAAAATTCATGTCTGCAC
ATTCGTGCCACATACGCACAGCTCTGCGTTCGTTCCCGTATTTTTATTCTGCTAGTGCCC
AGAAAGATGTTCTGCTGCATGTCATTTAAACGCAGTGTTGCGACCTGACCTGATGCCCAA
AATGGGTTCTATATTTAACCAAATACCGTATTCTGTTATGTTGGGTGTTTCATACTAAGG
TGTCAATACTATTCCCTTTAGAACTTCCGCAAAGGCACTGGAACTTCCTGCTATAGGGTT
GCTGCACTCAGGCATGTTATACCATAATTTATTTTTCTTATTTTTTATTTTTATATCCAC
TTTTTCGGCCGCTATGTGCACCTTTTTCGCGTGCAGTTTTCCTTACTACAACTTGTTTTA
TGTTATTAAAATATGAATCGTACAAA
| Pfam |
Tis11B_N (IPR007635) - T[75-147] 2.6E-5 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[158-191] 4.97E-10 - T[193-226] 1.57E-10 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[159-187] 17.178 - T[197-225] 15.91 |
| SMART |
Znf_CCCH (IPR000571) - T[159-186] 3.1E-9 - T[197-224] 1.3E-8 |
| Pfam |
Znf_CCCH (IPR000571) - T[160-186] 5.6E-11 - T[198-224] 1.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 45.32 % | 165 | 1.78E-47 |
| TISD_HUMAN | 39.394 % | 142 | 1.0E-37 |
| TTP_HUMAN | 68.571 % | 110 | 1.87E-27 |