- Transcript 'KH2012:KH.C1.1082.v1...' >
- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C7.703.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C4.182.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.182.v1.A.nonSL4-1
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
KhC4 [111,285 / 113,675]
Amino acid sequence
Length: 408
>KH.C4.182.v1.A.nonSL4-1
KHKCTRLFSYKETYLFGRTEVFNNLNATMSSTMISSYSDFSENLHKDFWESAIIRTTMDY
SVLKSGFDKIDMSVSQKVIAANLTSRPALTRRHSSSMFCSASTNNAPLTGYNENALLASH
ASLETVNEEKFRSRAFSEGSSVLSQESMQDQQQSATSRYKTELCRPFEENGKCKYGDKCQ
FAHGKHELRRMVRHPKYKTELCRTYHTSGFCPYGPRCHFIHNQEDVGIAKKQTQPTRIQS
QTSVPVKINNRQLSQHQRPRDLQLFTQSASFGHMPPYSPSNSSPSIHNTQPMFGLSEVLS
PISPMPQNSTGGQFFSYCGKGSNSPVESNRRSSFSDNRQSTPPITQLDIFNRSQQPTEFP
TIDTSDDLVFDTPPTPPDSDRESATGSPKNYEQMGQRLPIFRCLSKTE
Nucleotide sequence
Length: 1,943
>KH2012:KH.C4.182.v1.A.nonSL4-1
AAACACAAATGCACGAGGTTATTTAGCTATAAAGAAACTTATTTATTCGGTAGGACTGAA
GTATTTAATAATCTTAATGCCACTATGTCTTCAACTATGATCTCAAGCTATTCTGATTTT
AGCGAGAACTTACATAAAGACTTTTGGGAGTCAGCGATTATTCGTACTACAATGGACTAC
TCAGTATTAAAAAGTGGATTTGACAAGATTGACATGAGTGTGTCCCAAAAAGTGATCGCT
GCTAATTTGACCAGTCGACCTGCCCTTACACGCCGCCACTCTTCATCTATGTTTTGTTCA
GCGTCCACAAATAACGCACCGCTGACAGGATACAACGAGAATGCTCTGCTTGCTTCGCAC
GCTTCACTAGAGACGGTGAATGAAGAAAAATTCCGTAGCAGAGCTTTTAGCGAAGGCTCG
TCTGTACTAAGCCAAGAATCAATGCAAGACCAACAACAGTCCGCCACGAGCCGTTATAAA
ACCGAATTGTGTCGGCCGTTCGAGGAAAACGGAAAATGCAAATACGGCGACAAATGCCAG
TTTGCTCACGGCAAACACGAGTTACGTAGAATGGTTCGACACCCGAAATACAAAACGGAA
CTTTGTCGTACGTATCACACCAGTGGTTTTTGTCCATACGGACCACGGTGCCATTTTATC
CACAACCAAGAGGACGTTGGCATTGCTAAAAAACAAACTCAACCTACAAGAATACAATCG
CAAACGTCAGTCCCGGTAAAGATTAATAATCGCCAATTATCTCAGCATCAAAGACCACGT
GATCTTCAACTCTTTACACAAAGCGCATCGTTCGGCCACATGCCACCTTACTCGCCATCC
AACAGCAGCCCAAGTATTCACAACACGCAACCCATGTTTGGATTAAGTGAAGTCTTATCT
CCAATTTCACCCATGCCACAAAATAGTACAGGCGGTCAGTTCTTTAGTTATTGTGGTAAA
GGGAGTAATTCTCCGGTGGAATCGAACCGACGTAGCAGTTTCTCCGACAATCGTCAATCC
ACGCCACCGATCACACAACTCGATATCTTTAATCGAAGTCAACAACCAACTGAGTTTCCG
ACCATCGACACAAGCGATGATCTCGTATTTGATACGCCCCCAACACCACCGGATTCCGAC
CGAGAATCGGCAACTGGATCACCTAAAAACTATGAGCAAATGGGCCAAAGGTTACCAATC
TTCCGATGCCTGTCTAAAACCGAGTGAAAAATAATCTCCTTTCATGATATTTATTCTAAT
CCAAAGTTGGATATTATGCTGCACACAGACATTATTTATGTTAACACACGACCGTGTTCC
CCCAAAACCAGTACCGGCTATGTGTTTTACCTCTAGCCTTCGTAACTTTGGGAGCTTGTG
CCTTTTGATATTTTTACTGATATGCCTACTGTATTTTAACGCCATCACTGCTCACTGATT
ATGTTGCCTCAACACCGTGGATCTAATCGAGTATTTTAACTGTTTACGTGCGGTTTTCGC
CAGCATTTGTTGTGCTTAATTCAGCGGATAGTAAAACTAGAAAATTCATGTCTGCACATT
CGTGCCACATACGCACAGCTCTGCGTTCGTTCCCGTATTTTTATTCTGCTAGTGCCCAGA
AAGATGTTCTGCTGCATGTCATTTAAACGCAGTGTTGCGACCTGACCTGATGCCCAAAAT
GGGTTCTATATTTAACCAAATACCGTATTCTGTTATGTTGGGTGTTTCATACTAAGGTGT
CAATACTATTCCCTTTAGAACTTCCGCAAAGGCACTGGAACTTCCTGCTATAGGGTTGCT
GCACTCAGGCATGTTATACCATAATTTATTTTTCTTATTTTTTATTTTTATATCCACTTT
TTCGGCCGCTATGTGCACCTTTTTCGCGTGCAGTTTTCCTTACTACAACTTGTTTTATGT
TATTAAAATATGAATCGTACAAA
| Pfam |
Tis11B_N (IPR007635) - T[74-146] 2.6E-5 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[157-190] 4.97E-10 - T[192-225] 1.57E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[158-185] 3.1E-9 - T[196-223] 1.3E-8 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[158-186] 17.178 - T[196-224] 15.91 |
| Pfam |
Znf_CCCH (IPR000571) - T[159-185] 5.6E-11 - T[197-223] 1.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 45.32 % | 165 | 1.87E-47 |
| TISD_HUMAN | 39.394 % | 142 | 9.54E-38 |
| TTP_HUMAN | 68.571 % | 110 | 1.92E-27 |