- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C4.182.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.182.v1.R.nonSL3-1
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
KhC4 [111,265 / 113,675]
Amino acid sequence
Length: 414
>KH.C4.182.v1.R.nonSL3-1
LQHSRSKHKCTRLFSYKETYLFGRTEVFNNLNATMSSTMISSYSDFSENLHKDFWESAII
RTTMDYSVLKSGFDKIDMSVSQKVIAANLTSRPALTRRHSSSMFCSASTNNAPLTGYNEN
ALLASHASLETVNEEKFRSRAFSEGSSVLSQESMQDQQQSATSRYKTELCRPFEENGKCK
YGDKCQFAHGKHELRRMVRHPKYKTELCRTYHTSGFCPYGPRCHFIHNQEDVGIAKKQTQ
PTRIQSQTSVPVKINNRQLSQHQRPRDLQLFTQSASFGHMPPYSPSNSSPSIHNTQPMFG
LSEVLSPISPMPQNSTGGQFFSYCGKGSNSPVESNRRSSFSDNRQSTPPITQLDIFNRSQ
QPTEFPTIDTSDDLVFDTPPTPPDSDRESATGSPKNYEQMGQRLPIFRCLSKTE
Nucleotide sequence
Length: 1,963
>KH2012:KH.C4.182.v1.R.nonSL3-1
AGCTGCAGCACAGTCGTAGCAAACACAAATGCACGAGGTTATTTAGCTATAAAGAAACTT
ATTTATTCGGTAGGACTGAAGTATTTAATAATCTTAATGCCACTATGTCTTCAACTATGA
TCTCAAGCTATTCTGATTTTAGCGAGAACTTACATAAAGACTTTTGGGAGTCAGCGATTA
TTCGTACTACAATGGACTACTCAGTATTAAAAAGTGGATTTGACAAGATTGACATGAGTG
TGTCCCAAAAAGTGATCGCTGCTAATTTGACCAGTCGACCTGCCCTTACACGCCGCCACT
CTTCATCTATGTTTTGTTCAGCGTCCACAAATAACGCACCGCTGACAGGATACAACGAGA
ATGCTCTGCTTGCTTCGCACGCTTCACTAGAGACGGTGAATGAAGAAAAATTCCGTAGCA
GAGCTTTTAGCGAAGGCTCGTCTGTACTAAGCCAAGAATCAATGCAAGACCAACAACAGT
CCGCCACGAGCCGTTATAAAACCGAATTGTGTCGGCCGTTCGAGGAAAACGGAAAATGCA
AATACGGCGACAAATGCCAGTTTGCTCACGGCAAACACGAGTTACGTAGAATGGTTCGAC
ACCCGAAATACAAAACGGAACTTTGTCGTACGTATCACACCAGTGGTTTTTGTCCATACG
GACCACGGTGCCATTTTATCCACAACCAAGAGGACGTTGGCATTGCTAAAAAACAAACTC
AACCTACAAGAATACAATCGCAAACGTCAGTCCCGGTAAAGATTAATAATCGCCAATTAT
CTCAGCATCAAAGACCACGTGATCTTCAACTCTTTACACAAAGCGCATCGTTCGGCCACA
TGCCACCTTACTCGCCATCCAACAGCAGCCCAAGTATTCACAACACGCAACCCATGTTTG
GATTAAGTGAAGTCTTATCTCCAATTTCACCCATGCCACAAAATAGTACAGGCGGTCAGT
TCTTTAGTTATTGTGGTAAAGGGAGTAATTCTCCGGTGGAATCGAACCGACGTAGCAGTT
TCTCCGACAATCGTCAATCCACGCCACCGATCACACAACTCGATATCTTTAATCGAAGTC
AACAACCAACTGAGTTTCCGACCATCGACACAAGCGATGATCTCGTATTTGATACGCCCC
CAACACCACCGGATTCCGACCGAGAATCGGCAACTGGATCACCTAAAAACTATGAGCAAA
TGGGCCAAAGGTTACCAATCTTCCGATGCCTGTCTAAAACCGAGTGAAAAATAATCTCCT
TTCATGATATTTATTCTAATCCAAAGTTGGATATTATGCTGCACACAGACATTATTTATG
TTAACACACGACCGTGTTCCCCCAAAACCAGTACCGGCTATGTGTTTTACCTCTAGCCTT
CGTAACTTTGGGAGCTTGTGCCTTTTGATATTTTTACTGATATGCCTACTGTATTTTAAC
GCCATCACTGCTCACTGATTATGTTGCCTCAACACCGTGGATCTAATCGAGTATTTTAAC
TGTTTACGTGCGGTTTTCGCCAGCATTTGTTGTGCTTAATTCAGCGGATAGTAAAACTAG
AAAATTCATGTCTGCACATTCGTGCCACATACGCACAGCTCTGCGTTCGTTCCCGTATTT
TTATTCTGCTAGTGCCCAGAAAGATGTTCTGCTGCATGTCATTTAAACGCAGTGTTGCGA
CCTGACCTGATGCCCAAAATGGGTTCTATATTTAACCAAATACCGTATTCTGTTATGTTG
GGTGTTTCATACTAAGGTGTCAATACTATTCCCTTTAGAACTTCCGCAAAGGCACTGGAA
CTTCCTGCTATAGGGTTGCTGCACTCAGGCATGTTATACCATAATTTATTTTTCTTATTT
TTTATTTTTATATCCACTTTTTCGGCCGCTATGTGCACCTTTTTCGCGTGCAGTTTTCCT
TACTACAACTTGTTTTATGTTATTAAAATATGAATCGTACAAA
| Pfam |
Tis11B_N (IPR007635) - T[80-152] 2.7E-5 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[163-196] 4.97E-10 - T[198-231] 1.7E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[164-191] 3.1E-9 - T[202-229] 1.3E-8 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[164-192] 17.178 - T[202-230] 15.91 |
| Pfam |
Znf_CCCH (IPR000571) - T[165-191] 5.7E-11 - T[203-229] 1.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 45.32 % | 165 | 1.94E-47 |
| TISD_HUMAN | 39.394 % | 142 | 9.09E-38 |
| TTP_HUMAN | 68.571 % | 110 | 2.24E-27 |