- Transcript 'KH2012:KH.S1462.1.v2...' >
- Clone 'cien177364' >
- Transcript 'KH2012:KH.C14.520.v1...' >
- Transcript 'KH2012:KH.C7.703.v1....' >
- Transcript 'KH2012:KH.C4.182.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.182.v2.A.SL5-1
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
KhC4 [111,879 / 113,675]
Amino acid sequence
Length: 359
>KH.C4.182.v2.A.SL5-1
ESAIIRTTMDYSVLKSGFDKIDMSVSQKVIAANLTSRPALTRRHSSSMFCSASTNNAPLT
GYNENALLASHASLETVNEEKFRSRAFSEGSSVLSQESMQDQQQSATSRYKTELCRPFEE
NGKCKYGDKCQFAHGKHELRRMVRHPKYKTELCRTYHTSGFCPYGPRCHFIHNQEDVGIA
KKQTQPTRIQSQTSVPVKINNRQLSQHQRPRDLQLFTQSASFGHMPPYSPSNSSPSIHNT
QPMFGLSEVLSPISPMPQNSTGGQFFSYCGKGSNSPVESNRRSSFSDNRQSTPPITQLDI
FNRSQQPTEFPTIDTSDDLVFDTPPTPPDSDRESATGSPKNYEQMGQRLPIFRCLSKTE
Nucleotide sequence
Length: 1,796
>KH2012:KH.C4.182.v2.A.SL5-1
GAGTCAGCGATTATTCGTACTACAATGGACTACTCAGTATTAAAAAGTGGATTTGACAAG
ATTGACATGAGTGTGTCCCAAAAAGTGATCGCTGCTAATTTGACCAGTCGACCTGCCCTT
ACACGCCGCCACTCTTCATCTATGTTTTGTTCAGCGTCCACAAATAACGCACCGCTGACA
GGATACAACGAGAATGCTCTGCTTGCTTCGCACGCTTCACTAGAGACGGTGAATGAAGAA
AAATTCCGTAGCAGAGCTTTTAGCGAAGGCTCGTCTGTACTAAGCCAAGAATCAATGCAA
GACCAACAACAGTCCGCCACGAGCCGTTATAAAACCGAATTGTGTCGGCCGTTCGAGGAA
AACGGAAAATGCAAATACGGCGACAAATGCCAGTTTGCTCACGGCAAACACGAGTTACGT
AGAATGGTTCGACACCCGAAATACAAAACGGAACTTTGTCGTACGTATCACACCAGTGGT
TTTTGTCCATACGGACCACGGTGCCATTTTATCCACAACCAAGAGGACGTTGGCATTGCT
AAAAAACAAACTCAACCTACAAGAATACAATCGCAAACGTCAGTCCCGGTAAAGATTAAT
AATCGCCAATTATCTCAGCATCAAAGACCACGTGATCTTCAACTCTTTACACAAAGCGCA
TCGTTCGGCCACATGCCACCTTACTCGCCATCCAACAGCAGCCCAAGTATTCACAACACG
CAACCCATGTTTGGATTAAGTGAAGTCTTATCTCCAATTTCACCCATGCCACAAAATAGT
ACAGGCGGTCAGTTCTTTAGTTATTGTGGTAAAGGGAGTAATTCTCCGGTGGAATCGAAC
CGACGTAGCAGTTTCTCCGACAATCGTCAATCCACGCCACCGATCACACAACTCGATATC
TTTAATCGAAGTCAACAACCAACTGAGTTTCCGACCATCGACACAAGCGATGATCTCGTA
TTTGATACGCCCCCAACACCACCGGATTCCGACCGAGAATCGGCAACTGGATCACCTAAA
AACTATGAGCAAATGGGCCAAAGGTTACCAATCTTCCGATGCCTGTCTAAAACCGAGTGA
AAAATAATCTCCTTTCATGATATTTATTCTAATCCAAAGTTGGATATTATGCTGCACACA
GACATTATTTATGTTAACACACGACCGTGTTCCCCCAAAACCAGTACCGGCTATGTGTTT
TACCTCTAGCCTTCGTAACTTTGGGAGCTTGTGCCTTTTGATATTTTTACTGATATGCCT
ACTGTATTTTAACGCCATCACTGCTCACTGATTATGTTGCCTCAACACCGTGGATCTAAT
CGAGTATTTTAACTGTTTACGTGCGGTTTTCGCCAGCATTTGTTGTGCTTAATTCAGCGG
ATAGTAAAACTAGAAAATTCATGTCTGCACATTCGTGCCACATACGCACAGCTCTGCGTT
CGTTCCCGTATTTTTATTCTGCTAGTGCCCAGAAAGATGTTCTGCTGCATGTCATTTAAA
CGCAGTGTTGCGACCTGACCTGATGCCCAAAATGGGTTCTATATTTAACCAAATACCGTA
TTCTGTTATGTTGGGTGTTTCATACTAAGGTGTCAATACTATTCCCTTTAGAACTTCCGC
AAAGGCACTGGAACTTCCTGCTATAGGGTTGCTGCACTCAGGCATGTTATACCATAATTT
ATTTTTCTTATTTTTTATTTTTATATCCACTTTTTCGGCCGCTATGTGCACCTTTTTCGC
GTGCAGTTTTCCTTACTACAACTTGTTTTATGTTATTAAAATATGAATCGTACAAA
| Pfam |
Tis11B_N (IPR007635) - T[29-97] 3.1E-5 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[108-141] 4.19E-10 - T[143-176] 1.31E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[109-136] 3.1E-9 - T[147-174] 1.3E-8 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[109-137] 17.178 - T[147-175] 15.91 |
| Pfam |
Znf_CCCH (IPR000571) - T[110-136] 4.8E-11 - T[148-174] 8.6E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 56.429 % | 162 | 4.85E-47 |
| TISD_HUMAN | 63.81 % | 142 | 2.87E-38 |
| TTP_HUMAN | 68.571 % | 111 | 6.52E-28 |