Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C4.184.v4.R.ND2-2

Possible name(s)

RGP1

Gene model

KH2012:KH.C4.184

Location

KhC4 [1,246,181 / 1,250,873]

Sequences

Amino acid sequence

Length: 387

>KH.C4.184.v4.R.ND2-2
NMIEVVAKLRRGSVYFAGETIHCSLTFTNVPDTEPGNNTESETIAWASVQLHCFCSISEA
RVVLPPALMKNMLAKRKDVGPSTSFVPYKDEQGHCVLQTPVKILFCDLKLAPGESKVFKF
QEAIPSDTPPTYRGPSCKYSYKLTVGTQRVGAPIKLLRIPVRVLVVYGLTEYQINEDQIP
SNPFIEEKKTKGQLLDIATDVLSTITSRRSYKNYKIANSNGLMGVFSLMKTSAKIGEDIV
GVFNFADGTVPCLQYMVCLQSEEILAEECQHSPSQGNAIISYAKHIEFCLFANQTHVILP
IPLHVTPNFLTELVCLKWRLHFEFVTATSPLKGLDLETGQQRDRMWQGPGKIKTEVTSWD
IPVQVLPTMPTQAENVAASHTLPLLRF

Nucleotide sequence

Length: 1,683

>KH2012:KH.C4.184.v4.R.ND2-2
TACTATGGTATTTAATAGTGTACAGAACGTCTCTTGATCCTTTTTAAAATGTCCATCTGT
TTGATTGAAACAACATAAACTAAAACATGATCGAGGTCGTGGCAAAGCTGAGGCGAGGTT
CGGTTTACTTTGCTGGGGAAACTATTCATTGCTCGTTAACGTTCACTAATGTACCGGACA
CGGAACCAGGAAATAACACAGAAAGCGAAACAATCGCATGGGCAAGTGTTCAACTTCATT
GCTTCTGTAGCATAAGTGAAGCAAGAGTAGTGTTGCCACCTGCACTCATGAAGAATATGT
TGGCAAAGCGGAAAGATGTGGGTCCATCTACCTCATTTGTTCCATACAAAGATGAACAAG
GACATTGTGTTTTACAAACTCCTGTCAAAATTTTATTCTGTGATTTGAAACTTGCTCCTG
GAGAAAGTAAAGTATTTAAATTTCAAGAAGCCATTCCTAGTGACACACCGCCCACATATA
GAGGCCCTTCATGTAAATACTCATATAAACTGACAGTTGGCACGCAGAGGGTTGGGGCTC
CGATAAAACTGCTACGAATTCCTGTTCGTGTATTAGTTGTGTATGGTTTAACTGAATATC
AAATAAATGAAGATCAAATTCCCAGCAACCCATTTATTGAAGAAAAGAAAACAAAGGGTC
AGCTCCTTGATATTGCAACCGATGTATTAAGTACCATCACTTCACGACGATCCTACAAAA
ACTACAAGATAGCAAACAGCAATGGACTTATGGGTGTCTTCTCGTTAATGAAAACTTCTG
CAAAGATTGGAGAAGATATTGTTGGGGTGTTCAACTTTGCTGATGGTACTGTACCATGTT
TACAGTACATGGTCTGTCTACAAAGTGAAGAAATATTGGCAGAGGAATGCCAGCATTCGC
CAAGTCAGGGGAATGCAATTATATCTTACGCAAAACACATTGAGTTCTGTTTATTTGCGA
ACCAAACTCATGTAATACTTCCAATTCCATTACATGTCACACCTAACTTTCTAACTGAAC
TTGTGTGTCTAAAATGGAGGCTTCATTTTGAATTTGTCACTGCCACGTCACCCTTAAAGG
GCTTAGATCTAGAAACAGGACAGCAGCGTGACCGAATGTGGCAAGGACCTGGGAAGATAA
AAACAGAAGTAACATCATGGGACATCCCTGTACAAGTCTTACCCACCATGCCAACCCAAG
CGGAGAATGTGGCGGCGTCACATACTTTGCCCTTGTTACGGTTTTAGGTCAAATAAAGTT
ATTCTACTTTTGTGCAATCCAATGACGTAGGCAACGCCACATATTCGCATGCACTAAGAA
GTGTTTCTTACGGTATCAAAAAAGGAAATTCTCTATTTTCTGATTTTTGTCACGAAATAA
ATCTCTTTATGGATCATTTACATTCTCTTTTCAAATAGTTTAAAGACATCTTGAACACAA
TATGCCAAAAGACGAAACTCCCCTAGGGTATATGACAGTAACAGTATCTTGCTGTTAAAC
TGTTTAAACATCGGCCTTCAATATACTACAAGCAATTTTAATGAAAAACTTTTATTTTAA
ACTTGGAACGCAAATAAGTATTAAAACAAGTTCGGCACACATGGAAGAAATTTTGAAATA
TTTGTGGTTTGTTCTTTTCAACGTTTTTTTTTTGTGAAAAAATAAACTGGTAACGGTAAC
GTA

InterProScan

Pfam	Rgp1 (IPR014848) - T[96-167] 2.1E-20 - T[204-326] 4.1E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RGP1_HUMAN	45.103 %	327	5.52E-110