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- Transcript 'KH2012:KH.C4.191.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.191.v2.A.SL1-1
Possible name(s)
SLCO1B1; SLCO1B3; SLCO2B1
Gene model
Location
KhC4 [4,048,014 / 4,061,718]
Amino acid sequence
Length: 736
>KH.C4.191.v2.A.SL1-1
MEKCEDSGTGTLLENELIETKNHDGSKSIFTRVRTFVAFLSLLQLVQVMGSGYNKSALTS
IERRYQLTTFTVGILQSCFHIGNLSVILFVSYFGSKWHRPRVIAFGSLIMASSCVMSALP
QFAGGRYGSRYLKCEDSAMFIDQTTGTGEPYLNLPAPLNETKYQSRYDSLNLPDVKMAAG
DEAKIKTRFHASSKMINEPSTLRSESFDEPVTLCTSGPPVLPSTTENKARRESDMHNSSL
YIFIAVGNVLKGIGHAPLHPLGISFIDDYATPANSAVYIGVISALSLLGPAFGFMLGSLT
TSVWVDIGWVNVTTVSITPHHPSWVGAWWVGYLVIAFMMVLVTIPLLLYAKRTPRKKHTV
AFVQAVVVSLEPACQIKQMNNQDRPPRVVSLIAYLDEVKSVKNFGLTLKGLLRDPVFMSI
TTGFVSLTSFLAASITFIAKYMETQFDLTASLANLLHGCVNLPMAVIGNILGGWIIRRKN
LDVQKTLSVIIIGLIVTIVSVGLLFMFGCDENDILGLAEPQRSDCVNDCDCGDVFDPVCD
VTSNVTYNSPCHAGCKRTEYINGVQVFFDCSCIAAENRNASIQLTKGSCKRSPCWNELII
FLILMAAASMFAGVSATPSTLTILRVVDPSEKGFAIGIVFVFTRFLAWIPSPVYVGSALD
SACLIWSSSSVDGNSNEDHQRCRVYNNNILRRNFFGLVGLQLLFAVVFYLIALYLVTKSL
RNRDVEICKDEMPESV
Nucleotide sequence
Length: 2,342
>KH2012:KH.C4.191.v2.A.SL1-1
GATGGAGAAGTGTGAGGATTCAGGAACAGGCACTTTACTTGAAAATGAGTTAATTGAGAC
AAAGAATCATGATGGCAGTAAATCTATCTTCACCCGTGTTAGAACCTTCGTTGCTTTTTT
ATCGCTGCTTCAACTTGTACAAGTTATGGGTAGCGGGTACAATAAAAGTGCTCTTACATC
AATTGAACGTCGATACCAACTAACTACCTTCACTGTTGGAATATTACAAAGTTGTTTTCA
TATTGGGAACCTCAGTGTTATTCTCTTCGTTAGTTATTTCGGATCAAAATGGCACAGGCC
AAGGGTTATTGCATTTGGGTCTTTGATCATGGCAAGCTCCTGCGTTATGTCTGCTCTGCC
GCAGTTCGCTGGCGGTAGATACGGATCGAGGTATCTCAAGTGCGAGGATTCTGCTATGTT
TATCGATCAAACAACAGGCACGGGCGAGCCATACTTGAATTTGCCAGCGCCGTTGAATGA
GACAAAATATCAATCAAGATACGATAGTTTGAACTTGCCCGATGTCAAAATGGCAGCGGG
GGATGAAGCTAAAATTAAAACTAGATTTCACGCATCGAGTAAAATGATAAACGAACCATC
AACGCTACGAAGTGAAAGTTTTGATGAACCGGTTACTCTTTGTACGTCTGGCCCCCCCGT
GCTCCCAAGCACAACAGAGAACAAAGCACGCCGTGAAAGTGACATGCACAATTCATCTCT
CTACATATTTATCGCAGTTGGAAATGTCCTGAAGGGAATCGGACATGCCCCGCTCCACCC
ATTAGGAATCTCCTTTATCGACGACTACGCTACACCAGCCAATTCAGCTGTTTATATCGG
TGTAATATCAGCTCTTTCTTTACTCGGGCCTGCATTTGGTTTCATGCTTGGCTCACTTAC
TACTAGCGTGTGGGTGGACATTGGTTGGGTGAATGTCACCACTGTGTCTATTACCCCACA
CCACCCCTCATGGGTCGGGGCCTGGTGGGTGGGGTATCTTGTTATCGCCTTCATGATGGT
GTTAGTCACAATACCACTGTTGTTATACGCAAAGAGAACGCCGAGGAAGAAACACACGGT
TGCATTTGTTCAAGCAGTAGTTGTTTCCCTGGAACCAGCATGTCAGATAAAACAAATGAA
CAACCAAGATAGACCACCAAGAGTGGTTTCTCTCATCGCTTATTTAGATGAAGTCAAAAG
TGTGAAAAATTTCGGCTTGACGTTGAAAGGACTGTTAAGAGATCCTGTGTTTATGAGTAT
CACAACTGGTTTTGTGAGTCTAACAAGCTTTCTCGCTGCTTCTATAACCTTCATTGCAAA
ATACATGGAAACCCAATTCGATCTCACAGCTTCGTTGGCCAATCTTTTACACGGATGCGT
GAATCTTCCTATGGCTGTAATTGGAAACATTCTTGGTGGTTGGATAATTAGAAGAAAGAA
CCTTGATGTACAGAAGACACTCTCTGTCATTATAATCGGCCTTATTGTGACAATTGTTTC
AGTTGGGCTGTTGTTTATGTTCGGTTGCGACGAAAACGACATTTTAGGCTTAGCGGAGCC
ACAAAGATCTGACTGTGTTAATGACTGTGATTGCGGTGACGTATTCGATCCGGTGTGTGA
CGTCACTTCAAATGTGACGTATAATTCTCCTTGTCATGCCGGATGCAAGAGAACAGAATA
CATTAATGGAGTTCAGGTTTTCTTTGACTGCTCCTGTATAGCCGCAGAAAACAGGAACGC
TTCAATTCAACTCACAAAGGGCTCATGTAAACGAAGTCCATGTTGGAACGAACTCATAAT
CTTCCTTATATTAATGGCTGCAGCGAGTATGTTTGCCGGAGTGTCCGCCACACCGTCCAC
GCTTACTATTCTACGCGTTGTTGACCCCTCGGAAAAGGGTTTTGCAATCGGTATTGTCTT
CGTCTTCACTCGATTTCTTGCATGGATACCTTCACCTGTTTACGTGGGGTCTGCGTTGGA
CTCGGCATGTTTAATTTGGTCGTCTTCCTCGGTGGATGGGAATTCAAATGAAGATCATCA
ACGTTGCCGGGTGTACAACAACAATATTCTCAGGCGGAATTTCTTTGGACTAGTTGGTCT
TCAATTATTATTTGCTGTTGTTTTTTATTTAATCGCACTTTACCTTGTCACCAAGAGCCT
GCGGAACAGAGACGTTGAAATTTGCAAAGACGAAATGCCAGAATCTGTCTAGTGTTGTGA
CTATCTTATGCTTTGAGCTATATAGAAGCTATATGCGTTTGTCTTCATGGCGGAAGCAAT
TTGTAGGATATATTGTACTACTTTTCTATTTCAATTATCACAATAAAGTTTCACCTCTAC
AA
| PANTHER |
OATP (IPR004156) - T[1-150] 0.0 - T[177-697] 0.0 |
| ProSiteProfiles |
MFS_dom (IPR020846) - T[30-717] 9.655 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[35-121] 2.88E-34 - T[235-365] 2.88E-34 - T[399-514] 2.88E-34 - T[600-661] 2.88E-34 - T[695-716] 2.88E-34 |
| Pfam |
OATP (IPR004156) - T[36-688] 3.2E-149 |
| CDD |
MFS_dom (IPR020846) - T[37-119] 7.26729E-4 - T[238-518] 0.00152467 |
| TIGRFAM |
OATP (IPR004156) - T[218-713] 6.3E-114 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[519-574] 10.36 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[523-572] 8.98E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO2B1_HUMAN | 32.329 % | 337 | 2.77E-105 |
| SO1B1_HUMAN | 28.455 % | 325 | 3.83E-101 |
| SO1B3_HUMAN | 29.086 % | 324 | 1.57E-100 |