- Transcript 'KH2012:KH.C4.21.v2.R...'
Transcript Model
Transcript Id
KH2012:KH.C4.21.v2.R.ND1-1
Possible name(s)
ARHGEF17; ECT2; FGD6
Gene model
Location
KhC4 [3,665,502 / 3,670,001]
Amino acid sequence
Length: 591
>KH.C4.21.v2.R.ND1-1
ESYRMGNKCSTFFKRCPCFGGENKDEETEPLLKPESSVARSAFKNPKSVRSILGTPSPRK
WSSCTDISAPIITPSSTNSLQSLNNASRSKSRSSSPLLFSPHHNAKKPNQQPGVASADVT
NTSPPVHGTLTKQNHSLDIANTPDTVAKEVLVSHTQSLRSLNNFTPYQDTDDTSSLYTRP
SLSSTGTFESQDYDNISLLSSSSDADVPTKRHRTAMELLQTETTYLRNLNTIIKVYKEPL
QKAADEGKPLLAPEDIRNAFGGIDDIAKLHACIHQDLSEMIDNWEEDCCIAHIFTKYREQ
LLKVYPPYVNYFDMGKEILMKQEKANPELSEFFLACFHEPQSLKQPLNALLIRPVQRLPS
ISLLINDLHKRTDDGLRDKTELEEAKKVLKQVLSHINEDKRKTEGKMKIFDIVYEVDGCP
VEVVSSNRLFVSRIDVATLTDGLYRSGERLALYLLTDVLEVAKWRNRSHGKAAPLLKHIQ
LLPLSNIISIWDVQDNDECKNLFAVKYKSQGNAIIDSSVNGQEEKMSVLQLLDDRTFKSK
WLNALTAQIAEVKQEKVESVMKQVEPMELASHVKKGSKILKKLTRVKPKAE
Nucleotide sequence
Length: 2,521
>KH2012:KH.C4.21.v2.R.ND1-1
AGAAGCATGCTGTGAACAAGCTGTTTAGTAAACTGTTGATCCGCTTTGGTTGTACTCGGT
GCCAATCTTTCGATGAGAGAGCTATAGAATGGGTAATAAGTGCAGCACTTTCTTTAAGAG
GTGTCCATGTTTTGGTGGAGAAAATAAGGATGAGGAAACGGAGCCATTGTTAAAACCAGA
GTCATCAGTTGCACGTTCAGCATTCAAAAATCCGAAGTCCGTTCGTTCAATACTCGGCAC
TCCAAGCCCAAGGAAGTGGTCAAGCTGCACAGATATATCTGCTCCAATTATTACTCCAAG
TTCAACAAATTCACTGCAAAGTTTAAACAATGCAAGTCGCTCAAAGTCTCGTTCATCAAG
CCCTTTGCTATTTTCTCCTCATCACAATGCCAAGAAACCAAATCAACAGCCAGGTGTTGC
TTCAGCTGATGTTACCAACACTTCACCACCTGTGCATGGCACCCTTACAAAACAGAACCA
CAGCCTTGACATTGCAAATACTCCCGATACTGTGGCAAAGGAGGTATTAGTTAGTCACAC
ACAATCTTTAAGGTCTTTGAACAACTTTACACCTTATCAAGATACTGATGATACGTCGTC
TCTTTATACTCGTCCATCATTATCATCAACTGGAACATTTGAATCACAAGATTACGACAA
CATTAGTTTACTAAGTTCTTCTTCTGACGCAGATGTCCCGACCAAGCGACATCGAACAGC
CATGGAGCTTCTGCAAACTGAAACAACTTATCTCAGAAATCTAAACACCATTATAAAGGT
ATACAAAGAACCTCTGCAGAAAGCAGCAGATGAAGGAAAACCTCTTCTTGCTCCTGAGGA
CATCCGGAATGCTTTTGGAGGAATAGACGACATTGCGAAGCTGCATGCTTGCATTCATCA
AGACCTCAGTGAAATGATTGATAACTGGGAGGAGGATTGTTGCATAGCTCACATCTTCAC
TAAATACAGGGAGCAATTACTTAAGGTTTACCCACCATATGTGAACTACTTTGATATGGG
GAAAGAAATACTGATGAAGCAAGAGAAAGCAAATCCTGAGCTCAGTGAATTCTTCCTTGC
TTGTTTCCATGAACCACAGAGCTTAAAGCAACCACTCAATGCGCTGCTTATTCGACCTGT
ACAGCGGCTTCCCAGTATTTCCCTGTTAATAAACGATTTGCACAAGCGAACTGATGATGG
GCTAAGAGACAAAACTGAATTGGAAGAAGCAAAGAAAGTTTTAAAACAAGTCCTGTCGCA
TATTAATGAAGACAAACGGAAGACTGAAGGAAAAATGAAAATCTTTGACATTGTTTATGA
GGTTGATGGCTGCCCCGTAGAAGTTGTATCGTCAAACAGACTGTTTGTATCACGTATAGA
TGTTGCTACACTCACTGATGGTCTGTATCGAAGTGGTGAAAGGTTGGCTCTTTATCTTTT
AACTGATGTTCTTGAAGTTGCAAAGTGGAGGAACAGATCTCATGGAAAGGCAGCCCCACT
ACTTAAACACATCCAGTTACTGCCATTAAGTAACATCATAAGCATCTGGGATGTTCAGGA
TAATGATGAATGTAAAAATCTGTTCGCTGTCAAGTACAAAAGCCAGGGAAATGCAATTAT
TGATAGCAGTGTGAATGGACAGGAAGAAAAAATGTCAGTGCTACAACTTCTTGATGATAG
AACATTCAAATCCAAATGGTTGAACGCACTCACTGCACAAATAGCCGAGGTGAAACAGGA
AAAAGTAGAGAGTGTAATGAAGCAAGTTGAACCTATGGAACTTGCAAGCCACGTCAAGAA
AGGTTCAAAAATACTAAAGAAACTGACACGCGTGAAGCCAAAAGCTGAATAAATAAATAT
CTTCTATGTACAACATGTAGCAATCAACCTGCTGCTAATTTTAGGTATTTTTCTGTCCTT
ATCATAACAGGAAAACAAAACAACTTATTCAATTGCCTTCAGTTGGTTAACTTGATTCTA
TAAGTGCAGTAAACCTTCTGCTGTAGTATTTGAATTTTTTGTAGTACTTTGCTTGATCAT
TGCAAGTTTTGTGTGGCATACAACGCAATAATAGATATTGTTTACTTCCATAAGAGATTA
CTGGGTAGTCCTCAATGAATTGTGCTAAATTTAAATGGTGTGTATGTCGTACCATTTTAT
ATCTCGTATTATAGTGGCACTTAATTTTTCATTAATTTGTGACCTCGTTCCAATAGTTGT
TCAATTTGCGCTGATATACAATATATCACTGATGTAGTTGTCATATGGTGTGTACGCTAC
TTACACATGCAATTATTTCAAGCTGCTCTGTTGCATGGCTACTTTTGTAAATTCGACAGC
AGTCCTGTATGTTGCATTTTGTGTCTTTTATGTACTGCCGTACTTAAGCCTGGAAAGTTA
GACTGTGACTATATGCTTCAGGTGATCATAGGCTTGAACTGTTACTGGTGGTAATCATGC
TTACACATTTACATTCTTCAATTCATTTGCGTCGCTTTTGTGATGTATAAAATATACAAA
A
| PANTHER |
Ect2 (IPR026817) - T[111-575] 1.6E-112 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[208-416] 1.96E-48 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[209-418] 1.2E-51 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[210-399] 30.56 |
| CDD |
DH-domain (IPR000219) - T[211-397] 2.12545E-36 |
| SMART |
DH-domain (IPR000219) - T[214-398] 7.6E-45 |
| Pfam |
DH-domain (IPR000219) - T[216-397] 5.0E-37 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[347-372] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[425-556] 1.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHGH_HUMAN | 27.273 % | 85.1 | 4.65E-17 |
| ECT2_HUMAN | 39.241 % | 283 | 4.78E-85 |
| FGD6_HUMAN | 23.684 % | 82.4 | 2.82E-16 |