- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C4.230.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.230.v1.A.nonSL3-1
Possible name(s)
CNN3; TAGLN2; TAGLN3
Gene model
Location
KhC4 [5,110,898 / 5,113,179]
Amino acid sequence
Length: 211
>KH.C4.230.v1.A.nonSL3-1
KSKSFSTMAQREKGYGLSREIANKLNAKYDADDEKTVVAWIASVIHYNGAVPSGKDAVHT
WLRDGNILCSVINTLKPGTIRKVHKWDEFTATPSAMRKNKEQENISFFLKAAEDFGVQKT
DLFQTVDLYEQQNMAQVLSTIYKLDSAAQKKGYSTGATIGVKIADKNIRNHDEAKLKEGR
NVIGLQMGTNQTASQKGMTAYGLGRQLTPQQ
Nucleotide sequence
Length: 1,161
>KH2012:KH.C4.230.v1.A.nonSL3-1
AGATAAAACTTATAGGAAGCAGCAACAGCGTTATATTTGAAGTTTAATTACGTTTATAAT
CTCTTGTGAAAAAGCAAATCATTTTCAACAATGGCGCAACGAGAAAAAGGTTATGGTTTA
TCGCGGGAGATTGCGAACAAACTAAATGCAAAATATGATGCCGACGATGAAAAAACCGTG
GTCGCTTGGATTGCTTCAGTTATTCATTATAACGGTGCAGTTCCCTCCGGCAAAGACGCT
GTTCACACATGGTTAAGAGATGGGAACATTCTGTGTTCTGTTATCAACACCCTTAAACCT
GGCACCATTAGGAAAGTACATAAGTGGGACGAATTTACTGCCACACCAAGTGCTATGAGA
AAAAACAAAGAACAAGAAAATATTTCTTTCTTTCTAAAAGCGGCCGAGGACTTCGGAGTC
CAAAAGACTGATCTTTTCCAGACAGTAGACCTATACGAGCAACAAAACATGGCGCAAGTT
TTGTCAACCATTTACAAGCTGGATTCGGCTGCTCAGAAAAAAGGTTATTCTACCGGAGCC
ACTATTGGGGTAAAGATTGCTGATAAGAACATCAGAAATCACGACGAAGCAAAACTAAAG
GAAGGCCGTAATGTGATCGGGTTACAGATGGGCACGAACCAAACTGCTTCCCAAAAGGGC
ATGACAGCTTATGGACTCGGGCGACAATTGACTCCGCAACAGTAGATATGAACAAAAGAG
CGAACGTGCTTTTCAACTTTTTTGCATGCGCTCGCAACAACGCTGGTGTATTAACGATAA
CTTAAAAAAGCTGTATTTACCACGATCTACCAGTTTAACAATAACTGCAAACTTGATAAC
AAACTTACTAAGATGATTATTACACTGCAATAATACTAGAATTGATTGAAGCTGTCGATA
CATTGTATCTGCGGAATCAACTCTATTGCCGCTGGATTAATATTTTCAAAATGCACTTCT
TTATTTGCATGCCTTTATTAAGTGTATATCAGCATACGATTAACTCATTTCAACCCTATA
ATAATAATGGACCAATTGAACTGTTGTTAAAATATTGTACTTATTCACTCGCTATTATAA
CGTAAGACCAAAGCATCGCATTATAAATATAGGCCCCTGTAAATGGATTTGTTGCATTAA
AATTTGTAGCAACAGAGTTTA
| PRINTS |
SM22_calponin (IPR003096) - T[10-24] 1.4E-34 - T[29-42] 1.4E-34 - T[100-116] 1.4E-34 - T[116-131] 1.4E-34 - T[137-151] 1.4E-34 - T[171-184] 1.4E-34 - T[184-199] 1.4E-34 |
| Gene3D |
CH_dom_sf (IPR036872) - T[16-183] 4.6E-33 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[24-170] 6.68E-32 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[31-148] 14.739 |
| CDD |
CH-domain (IPR001715) - T[32-144] 5.84858E-16 |
| SMART |
CH-domain (IPR001715) - T[33-144] 3.8E-16 |
| Pfam |
CH-domain (IPR001715) - T[33-148] 4.1E-18 |
| Pfam |
Calponin_repeat (IPR000557) - T[183-206] 1.9E-12 |
| ProSitePatterns |
Calponin_repeat (IPR000557) - T[183-202] . |
| ProSiteProfiles |
Calponin_repeat (IPR000557) - T[183-208] 14.177 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAGL3_HUMAN | 44.444 % | 151 | 2.16E-46 |
| CNN2_HUMAN | 40.594 % | 150 | 2.02E-44 |
| TAGL2_HUMAN | 42.647 % | 154 | 2.75E-47 |