- EST 'BW407502' >
- Transcript 'KH2012:KH.C4.239.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.239.v1.A.ND1-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC4 [872,730 / 874,497]
Amino acid sequence
Length: 280
>KH.C4.239.v1.A.ND1-1
RSNLKNKMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
DSYVGDEAQSKRGIVLDSGDGVSHNVPIYEGYALPHAIARLDLAGRDLSDYLMKILTERG
YSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRC
PETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTITMKIKIIAPPER
KYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,134
>KH2012:KH.C4.239.v1.A.ND1-1
ACACTCGACCAGCTATCACATCTCAGTATATTTCAACGTAAAGATCTAATCTTAAAAACA
AAATGTCAGACTCTGAAGAAGATCAAACCGCTCTGGTGTGCGACAATGGTTCAGGGTTAG
TAAAATCTGGATTCGCTGGAGATGACGCACCTCGTGCTGTCTTCCCATCTATCGTTGGAC
GACCAAGACATCAGGGAGTCATGGTCGGTATGGGTCAAAAAGACAGCTATGTTGGAGACG
AAGCACAAAGCAAGCGAGGTATTGTGTTGGATTCTGGTGATGGTGTTTCACACAATGTTC
CAATCTACGAGGGCTACGCTCTCCCTCACGCCATTGCTCGATTGGATTTAGCCGGTCGAG
ATCTCAGTGATTATTTGATGAAAATTCTCACTGAGAGAGGATACTCCTTTGTAACAACAG
CTGAACGCGAAATCGTTCGAGATATCAAAGAGAAGCTCTGCTACGTTGCGCTTGACTTCG
AACAAGAAATGGCCACTGCTGCTTCTTCGACTTCATTGGAAAAAAGTTATGAATTACCCG
ATGGTCAAGTTATCACCATTGGCAATGAAAGATTCAGATGTCCAGAAACACTCTTCCAAC
CTTCGTTTATCGGTATGGAATCGGCTGGAATCCACGAGACAACCTACAACTCCATCATGA
AGTGCGACATTGACATCCGAAAGGATCTTTACGCCAACAACGTTCTCTCCGGAGGTACAA
CCATCACCATGAAGATAAAGATCATTGCTCCACCAGAGAGGAAATACTCCGTCTGGATCG
GAGGATCCATCCTCGCTTCACTTTCCACCTTCCAACAGATGTGGATCACTAAACAAGAAT
ACGACGAAGCTGGCCCTTCAATCGTACACAGAAAATGTTTTTAACTTGTTACGAACTATT
TTTAACAGTGTGCTTAAGACTTGGAAAGTCGCAAAATTGTATTCTATTAATGCGAAATGC
AATAAACGTTTAAAATCTACTCCTTGTGTGAAACAGCCACTTGTGACTGGATTGAGTTGA
TCTTGTGCCATATTTTTTGTGGTGCTTCGCTGTGTAATAGGCGGTTGTTTATGAGTTGTC
AATGTGGGATTATTCAAGGCAGTTATGGGAATAACGTATTGTAATAAATATATA
| PANTHER |
Actin (IPR004000) - T[12-75] 2.8E-170 - T[73-279] 2.8E-170 |
| SMART |
Actin (IPR004000) - T[15-280] 5.7E-103 |
| PRINTS |
Actin (IPR004000) - T[36-45] 1.2E-7 - T[59-70] 1.2E-7 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[63-73] . - T[261-269] . |
| Pfam |
Actin (IPR004000) - T[71-229] 2.0E-47 - T[230-280] 4.8E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 88.938 % | 413 | 9.85E-146 |
| ACTS_HUMAN | 88.938 % | 414 | 3.27E-146 |
| ACTC_HUMAN | 88.938 % | 414 | 5.58E-146 |