- Transcript 'KH2012:KH.C4.24.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.24.v1.A.SL2-1
Possible name(s)
AP4M1; ARCN1
Gene model
Location
KhC4 [4,150,637 / 4,156,504]
Amino acid sequence
Length: 515
>KH.C4.24.v1.A.SL2-1
LSKDICTMVLLAAAICTKNGRCIISRQFVEMTRSRIEGLLAAFPKLMNTGNQHTFVETES
VRYVYQPLEKMYMVLITTKNSNILEDLETLRLFSRVIPEYCRVIDETDIQEHAFDLIFAF
DEVVALGYRESVNLAQIRTFTEMDSHEEKVFMAVRKSQEDETKAAMKRKAKELQQMRRDQ
HRGGRMGGMGSYGGGMSSMKMGGEIAQTLPPEPVKSKVIPSRTTGKAMKLGAKSKDVDNF
VDKLISEGETVRSGSAKSKKSDVAKTVVPSALTESVHIRLEEKLSITAGRDGDLEQMTLL
GICMLRVSDDQFGCIKVQMANALDKGCTIQTPPTVDKKAFLANSMIGLKSADKPFPTKQD
VGILKWRLQSSDESLIPLTINCWPNDNGSGGCDVNIEYELQQDELELVDVAISIPVPSGV
GAPNVSEVDGDFKHDSRKNILEWCLPVINSSNTTGSMEFSIPGSPDDFFPINVSFHATKR
LFTGIEVGHVEFAQGGSPVKFSTETALLVDKYEIV
Nucleotide sequence
Length: 2,068
>KH2012:KH.C4.24.v1.A.SL2-1
ATATTTATAATCTTTTTTACAGTGTGCCAATTTTGTTCTGCTTTGACTGTCAAAAGATAT
ATGCACTATGGTGCTTCTGGCTGCTGCAATATGTACAAAGAATGGAAGATGCATCATATC
TCGGCAGTTTGTTGAAATGACACGATCTCGTATTGAAGGATTACTTGCTGCATTTCCTAA
GCTTATGAACACAGGCAACCAACACACTTTTGTGGAGACGGAATCAGTCCGATATGTCTA
CCAACCATTAGAGAAAATGTACATGGTGCTCATTACAACCAAGAACAGTAATATACTTGA
AGATTTGGAGACACTGAGACTTTTTTCAAGAGTTATTCCTGAATATTGCCGAGTTATCGA
TGAAACCGACATCCAGGAGCATGCATTCGATCTTATATTCGCATTCGATGAGGTGGTTGC
TCTCGGTTACAGGGAGAGCGTTAACCTCGCTCAGATTCGAACTTTTACTGAGATGGACTC
GCATGAAGAGAAGGTCTTTATGGCTGTTAGAAAGTCACAAGAAGATGAGACAAAGGCAGC
AATGAAGAGGAAAGCCAAGGAGCTCCAACAGATGAGGAGAGATCAACATAGAGGAGGAAG
GATGGGGGGAATGGGATCATATGGAGGAGGGATGAGCTCCATGAAGATGGGAGGGGAGAT
TGCACAAACTCTTCCACCAGAACCTGTCAAGTCAAAAGTGATTCCATCCAGAACTACGGG
CAAGGCAATGAAACTTGGAGCAAAATCGAAAGACGTGGACAACTTTGTTGACAAACTCAT
CTCTGAAGGTGAAACTGTTAGATCGGGTTCAGCCAAGTCTAAGAAATCTGATGTCGCAAA
AACTGTGGTGCCTTCTGCATTGACTGAGAGTGTCCATATTCGACTTGAGGAGAAACTGTC
AATCACAGCAGGCAGGGATGGAGATTTGGAACAAATGACATTACTTGGAATTTGTATGTT
ACGTGTGTCAGATGATCAGTTTGGATGCATTAAGGTGCAAATGGCCAACGCCCTTGATAA
AGGATGCACAATACAGACCCCACCAACAGTTGATAAAAAAGCATTCCTGGCAAACTCCAT
GATTGGTTTAAAGAGTGCAGACAAACCCTTCCCTACTAAGCAAGATGTTGGAATTCTTAA
ATGGCGTTTGCAAAGCAGTGACGAAAGTCTCATACCACTTACAATCAACTGTTGGCCCAA
TGATAATGGTAGTGGTGGTTGTGATGTGAACATTGAATATGAGCTACAACAAGATGAACT
TGAGCTTGTTGACGTTGCAATATCCATCCCTGTGCCTTCGGGTGTGGGGGCTCCTAATGT
ATCGGAGGTGGATGGAGACTTTAAACATGATTCGAGGAAGAATATTCTGGAATGGTGTCT
TCCAGTAATTAACTCAAGCAACACAACTGGTTCAATGGAGTTTAGCATCCCCGGTTCTCC
AGATGATTTTTTCCCAATCAATGTTTCATTCCATGCAACTAAGAGGTTGTTTACAGGCAT
CGAGGTTGGCCATGTAGAGTTTGCACAAGGTGGCTCCCCTGTTAAGTTCTCGACAGAAAC
AGCACTCCTGGTGGACAAATATGAGATCGTTTAATTTATTTCAATGTAGATTATGAAGGT
ATAAGAAAAATGACCCCTGCATTTTTACGGTTGTAGATAACATAGATGCCATTGATTAAC
AAACTATGTATATTATATGATGTCCTATTTCTGTCTCCCTATCTATATACCACATGCTAT
GTTATGTGGTAAAGTTATAATACATGCTTTTGGTTATGGTAATTAACACACAAGCCTGTA
TGTGAATTCTTGGCTATATTGGAGTGTAAAGTATTGGAAATTGTGCAATGTATTTTCATG
GTATACCTATGTCCGCGCTTATGGATAGAGTGCCGATATTATAAAGTGCGATTTGTAATG
GAGGAATAAATATTAAAAAGCGTTACATACATACATACATACATACATACAGTAGGCTGT
AAAAACATACTGGTGATTGGGTCAGAGTTAGGCCGTTCCTTTGGTCAATTTTTGAAAGTT
TATGCCAAAATAAATGAACCGTCAATTT
| PANTHER |
Coatomer_dsu (IPR027059) - T[8-515] 2.9E-215 |
| SUPERFAMILY |
Longin-like_dom_sf (IPR011012) - T[12-149] 1.79E-31 |
| Pfam |
AP_mu_sigma_su (IPR022775) - T[15-136] 6.2E-5 |
| Pfam |
MHD (IPR028565) - T[273-500] 1.6E-26 |
| ProSiteProfiles |
MHD (IPR028565) - T[273-515] 29.767 |
| SUPERFAMILY |
AP2_Mu_C_sf (IPR036168) - T[274-514] 4.71E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPD_HUMAN | 64.147 % | 679 | 0 |