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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S52...'
  2. Molecular Tool 'Ci-Tbx6b-MO (Yagi's 25mer MO)'
  3. Transcript 'KH2012:KH.C4.265.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.265.v1.R.ND5-1

Possible name(s)

KH.C4.265

Location

KhC4 [4,923,974 / 4,937,935]

Sequences

Amino acid sequence

Length: 610

>KH.C4.265.v1.R.ND5-1
LVKKTDEVSSSPASTRISKYDDDDDEFEKGRQRRRREREERRKKEREELEKQLKDEEEAR
ADRDRRREERRRMREEESKPEVESYTTSTVVSKVVETQDDEYGNHEETETTTVVQSTEIV
VDYPVENGDHDDKDEEKEASPAPSESDHAEEEEEEVKIEERSQDEEEMTNGHSETEPDAE
PHKSYKTSVTTVTLTSKTTSSHPVESNDDAAHDEVQEKLNALKLKRQESEKKKYQTDSSQ
DDGDAKSKLKMLEEKRKLREQKRLEEEEREKEEALKREAEYQEKLRIEKEERTKRRLEAE
AKRQEYRKQLSKSDDEPKSPLSPKGLASPLASKVEQLSKHASESPKTSKHVEPVRVGSLD
SRMEKYAKQASKQETKKTGLDTSVIARDVSNRRNKWERGEVTSADKTTKKHEVIPVAGNI
SSRKNMWERGTVGTASKSSKGVADIKTGDFSSRKNKYLETLQQRGGPVKKAESPVAIKTG
VANRLNKWEKGEVGSKASFEKQKSKGDLPASGVGDRRNKWETLATDTAVKSATPKASVRL
VTTDVSNRKNLFESKAAATEQPEVKPAASSKYQASVSSGSEHDDVIERRQPERSYSNSEG
EDDLQYSDED

Nucleotide sequence

Length: 3,103

>KH2012:KH.C4.265.v1.R.ND5-1
ATTGGTAAAAAAGACTGATGAGGTTTCCTCCTCTCCCGCATCCACTCGGATCTCCAAGTA
CGATGATGATGATGATGAGTTTGAGAAGGGAAGGCAGAGAAGAAGAAGAGAAAGGGAGGA
AAGAAGGAAAAAAGAAAGAGAGGAATTGGAAAAACAATTAAAAGACGAGGAAGAAGCAAG
AGCAGATCGAGATCGGAGGAGAGAAGAAAGGAGGAGGATGCGGGAAGAAGAGAGCAAACC
GGAGGTTGAGAGTTACACGACCAGCACCGTAGTTTCCAAAGTTGTGGAGACACAAGATGA
TGAGTATGGGAATCATGAAGAGACGGAAACAACCACTGTTGTTCAATCAACGGAAATTGT
GGTTGATTACCCAGTTGAGAATGGGGACCACGATGATAAAGATGAAGAAAAAGAAGCTTC
ACCTGCTCCCAGTGAATCCGATCATGCAGAGGAAGAGGAAGAAGAAGTTAAAATAGAAGA
AAGATCACAAGATGAGGAAGAGATGACCAACGGACACTCCGAGACTGAACCTGATGCAGA
ACCACACAAATCTTATAAAACCTCGGTCACAACTGTAACACTGACATCCAAAACAACAAG
TTCCCACCCTGTTGAAAGCAATGATGATGCCGCACATGATGAAGTGCAAGAAAAACTCAA
TGCATTGAAACTGAAGAGACAAGAGTCAGAGAAGAAGAAATATCAAACTGACTCTTCCCA
GGATGATGGAGACGCTAAGTCAAAGCTGAAAATGTTAGAAGAAAAAAGGAAATTGAGAGA
ACAGAAGAGATTGGAAGAAGAAGAAAGAGAAAAGGAGGAAGCACTGAAGCGTGAAGCTGA
GTACCAGGAAAAACTCCGGATCGAGAAAGAGGAAAGGACGAAGAGGAGACTTGAGGCGGA
AGCAAAACGACAGGAATACAGGAAGCAGCTTTCGAAATCTGATGATGAACCAAAAAGTCC
TCTCAGTCCAAAAGGATTGGCCTCTCCTCTTGCATCTAAGGTTGAGCAACTAAGCAAGCA
TGCATCTGAATCCCCAAAGACAAGCAAACATGTAGAACCAGTAAGGGTGGGTAGCTTGGA
TAGCAGGATGGAGAAGTATGCGAAACAAGCATCAAAGCAGGAAACAAAGAAGACAGGTCT
CGACACTTCAGTGATAGCTCGTGATGTAAGTAACAGGAGGAATAAATGGGAACGTGGGGA
AGTTACTTCTGCGGATAAAACAACTAAGAAGCATGAAGTGATTCCCGTAGCTGGAAACAT
TTCCTCTCGTAAAAATATGTGGGAACGGGGAACTGTTGGTACTGCTTCCAAGTCAAGCAA
AGGAGTTGCCGATATTAAGACTGGAGATTTCTCAAGCCGCAAAAATAAATATCTGGAAAC
ACTGCAGCAACGTGGAGGCCCTGTCAAGAAAGCAGAATCTCCAGTTGCCATTAAAACTGG
TGTTGCAAACAGACTCAATAAATGGGAGAAGGGTGAAGTCGGTTCAAAAGCTTCTTTTGA
GAAGCAGAAATCAAAGGGTGACCTGCCAGCATCGGGGGTTGGTGATCGTCGTAACAAGTG
GGAGACACTCGCCACTGATACTGCTGTGAAGTCAGCCACTCCTAAAGCATCTGTTCGACT
CGTTACTACAGATGTCTCGAACCGTAAAAACCTCTTTGAAAGCAAAGCTGCGGCGACAGA
GCAACCAGAGGTCAAACCGGCCGCTTCTTCAAAGTATCAAGCGTCTGTTTCGAGCGGGTC
CGAGCACGATGACGTCATCGAACGTCGGCAACCCGAGAGGAGCTACTCTAACTCGGAAGG
CGAAGACGACTTGCAATACTCCGACGAAGACTGAATACCTTGCCGATAGTGTTAGGGTCT
CACATGAAACAAACAATGTGTTGCTCATAACCTTTGTTTCAATGCAGTAACGAGTCTTGT
ACGTCGCTGCATGCATTTGTTAACCCCGCTATACAGAACTGCGTTTTTATTACACACTGG
CTCCGACAGAAAGTTTCAATTAACGACGAAATCGCTTCGTTTTTTTCATAGTATTACTGT
TCTTTGTACATAAAAAACTTTGCCTGGACGAATTTTACCGACTTCGTATCTTTTAGTCGT
ACAAGTTTCATCCTTTTTATAAGTTTTGTAACTCGGGCCATTTTGGAGTTTTGCACATGA
CACAACACAACGACCCATTCCAAGCCTGTAACGTTTTTTACGGAAAACACTTTGTGCCAA
GGATGACCAAACCAAAGAATGTAGAAAAGACCAAACCATGTTTTTATGCTTACCAGTTTT
TTTGTAGCCAATCATTTTGCGGATCAAAATTTTTATGTTTCGACTTATAATTGCTGGTTA
CCCTATTATGAGTATATACTACTGCGTAGTGTTACATACAAAGCTTTGTACATATTCGCT
TTATCCCAATTAATCCCATAGTCCGCTGCATGCACATTACACGCGATGTATCCGTTTAAT
TTAAATGTATGAAAGATGCGCCTTACACTTTGTACTTCTGACGCAAACGGAGTTTCTCTT
CCAGGATATGACGTATTCAACATTTTCTCACATTGTTTTTTCGCCTTCAGTTGCCGGGTT
AACCGGTTTCTTTCCGTGTTCGTGACGTTGCGGACTTGTGACGTCACAAATCGCCTTGCT
CTTTCATATAAGCTTCTCAGTCTTCTATTTCATTCCGTTATGTTGGTCGTTATTTTGTCC
AGTGATCTTTCAGGCAATGCTGCATTATATATATCGCCCCTATCCATTTTCATTATTACC
AAACCCCACGCTGGTGGATTGCGGTCCGTGTATTGTACAGTGTGCGTTACAGTGTGTGCG
AATGCCCAATACGTTTATATCGTATGTTATTGCTTGATGACCTACACAGTATTCCTGTAT
TTCCTTGATTCTAATCAAATGATCTGTGCCGCACCAAATCAAATGCATGAAATCATTCAC
ATTCCGGTGGCGTTGTGTTTGTGTGGCATTCTGCAGTTTGTACGTAACGTTTAAATGATG
ACACACTTCTGGTTGTGTTCCGCTACTCTTTCTGTATCTACGCCTGTTCACAATAATCAA
GTTGATGATCGAAAATTATTTTAATAAAATTATATTCGCACTT

InterProScan

Pfam
Caldesmon_LSP (IPR006018) - T[49-455] 1.8E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value