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TRANSCRIPT CARD

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  1. Molecular Tool 'Harore-Tbx6(PNAP)-mRNA (Kumano 2014)' > 
  2. Transcript 'KH2012:KH.C4.317.v2....' > 
  3. Clone 'cima820795' > 
  4. Transcript 'KH2012:KH.L112.15.v1...' > 
  5. Transcript 'KH2012:KH.C4.317.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.317.v1.A.nonSL3-1

Possible name(s)

PJA1; RNF115; RNF126

Gene model

KH2012:KH.C4.317

Location

KhC4 [1,309,652 / 1,312,375]

Sequences

Amino acid sequence

Length: 132

>KH.C4.317.v1.A.nonSL3-1
ERISAVLQLVGRLENSTGSPPASKRTVANLPVIVVNKDHTGDECQCSVCMEEFEVGHNAT
KLGCSHVFHVHCIKLWLELHSTCPICRKPVDEFPCRPGTTNVPMTSQASGSSTSNEQPRF
YSDNFTPFYTYT

Nucleotide sequence

Length: 583

>KH2012:KH.C4.317.v1.A.nonSL3-1
GAAAGAATATCTGCAGTGCTGCAACTGGTTGGACGGCTGGAAAACAGCACAGGTTCGCCA
CCTGCTAGCAAGCGAACTGTTGCAAATCTTCCTGTCATTGTAGTCAATAAGGATCATACT
GGGGACGAATGCCAATGCTCGGTTTGCATGGAAGAATTCGAAGTAGGCCACAATGCAACC
AAGCTGGGTTGTTCCCACGTATTCCACGTCCATTGCATTAAGCTCTGGTTAGAGCTGCAC
AGCACGTGTCCTATCTGCCGAAAACCGGTCGACGAATTCCCATGCAGACCCGGAACTACA
AACGTACCTATGACATCACAAGCTAGTGGTTCGTCCACCTCAAATGAACAACCGCGCTTT
TACTCCGACAATTTCACACCGTTCTATACGTACACTTGAGATATTTACAAATATTGTACA
TGATTTGAGAAGTTCACTACGCCGTCTTTTATAGACAGTAGAAATGGATTTGCAGTACGC
CCGCTCGTTTTTTTGCGGGAAAATCATTGTGCTAATAAATTGCCTATTTATTTTTCAAGC
TGCTGTTGTATCACGCCCGAATACATGCTTGAGCATTTCAAAT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[10-92] 3.7E-21
Pfam
Znf_RING (IPR001841) - T[45-87] 8.5E-13
SMART
Znf_RING (IPR001841) - T[46-86] 1.4E-5
ProSiteProfiles
Znf_RING (IPR001841) - T[46-87] 12.43

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN126_HUMAN 41.176 % 84.3 1.8E-20
RN115_HUMAN 38.843 % 86.7 2.15E-21