Aniseed - Transcript Card

Transcript 'KH2012:KH.C4.370.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.370.v1.A.SL1-1

Possible name(s)

ADAMTS16; ADAMTS6; ADAMTSL5

Gene model

KH2012:KH.C4.370

Location

KhC4 [1,554,728 / 1,557,755]

Sequences

Amino acid sequence

Length: 229

>KH.C4.370.v1.A.SL1-1
DIPPSWIVDIMGHDETTPPPTTTTTEATTTTATTTTTTTTTPMPTTLPRPRRNKKNKPPY
CVPCKKPKNRKRHYCQSDFVIHARVLSKSKVEGKRYRHDVTVLSIFKSDFKLMSREYVWV
YSSCCPKFRAYRDYLIMGRKRRVEIGNDGRGIWLGANNGTDATDGRRRFETRLMVDHMDF
WHVWKRKYLKGLNKVANSINCSKYKRHATSLRRRDPESRRRFSRRRAGR

Nucleotide sequence

Length: 1,576

>KH2012:KH.C4.370.v1.A.SL1-1
GTGATATTCCACCAAGTTGGATAGTTGATATAATGGGACACGACGAAACAACCCCACCCC
CTACAACTACAACAACAGAAGCAACGACAACAACAGCAACAACAACGACAACAACAACAA
CAACGCCTATGCCCACAACCCTTCCTCGTCCAAGGAGGAACAAAAAGAACAAGCCCCCTT
ATTGCGTGCCTTGCAAGAAACCTAAAAATCGCAAGCGACATTACTGTCAGAGTGATTTCG
TGATTCACGCCCGGGTCTTATCCAAGTCAAAAGTTGAAGGCAAGCGGTATCGACATGACG
TCACAGTCCTAAGCATTTTCAAGTCTGACTTTAAACTGATGAGCCGAGAATACGTGTGGG
TATATAGCAGCTGCTGTCCTAAGTTCCGTGCCTACCGCGACTACCTTATCATGGGAAGGA
AGCGACGTGTTGAGATTGGAAATGATGGCCGTGGCATTTGGCTAGGCGCAAATAACGGTA
CAGACGCTACAGACGGCCGTCGAAGGTTTGAAACAAGGCTTATGGTCGATCATATGGATT
TCTGGCACGTGTGGAAACGGAAGTACCTTAAAGGTTTAAACAAAGTTGCGAATTCAATAA
ACTGCTCTAAGTACAAGCGCCACGCGACAAGCCTACGACGGAGAGACCCAGAAAGTCGGC
GGCGATTTTCACGACGCCGTGCTGGAAGGTAGACCGAACTGATGTATAGTTTTGTAAAAT
CCAAATCCCGAAGTCGACAATGAAGGTCCCCTTTAGTCAATACTCCACTCAACTGCCTTC
TATTCTGCTAAGGGTTTCATTCGTTGCTTCATTCACGTTCGACCACGGCTTCTTCACCTC
ACCAGCAGCCGTTCACATATTGCCAATACTTTTGTTCCACCTATCTGTATATGAGACAAT
CAAACTACATATTTTTTCACTTGCACCGTTTTTAATCCCACCGCGGGGCAGCCAATGAAA
GAGATGCTTCAAATGAATCATTTAGGTTTTTCCAAATAAATCATTTATTTTTTTCAAATA
TGTGCGATTAATTAAAAAAGCCTGATGTATAAATGAAATGTTCATTGTTTTAAATTGCTG
CTATATGGTTTTAATTACTATACTGCTCTGTTTAAATTTTGGTCGTAATGTTATGAATTG
TTTCTTATAATAGTTTTGATAAAGTTTCACTTTTAGACATCTTTTATTGCGTAATGTACG
AATGTACAGTTTAATGCCGTCCCTTTTAAAAATACCGTTTAAGGTTTAACATCCTACTAA
TGCTGTGTGAACACTCCTGTATTTAATTTTAGATTTTTTATTCCCTTCATAGTGAAAAGA
TAAAACAACCTAAATGCACTCACATTTACTATAGATACGTTTTGGTACGTTTTCCAAAGT
CGTATTTACTCTTTTTGTATATACATTTTCGTCTCTTTTACTGAATCGCTCTGATTTCTT
ACTTTTGCATATGTTTTATATGAGGTTCGTGGATTTGTTTGATACTACTCAATGAAGTAT
TTAGTTTGTCGGCATTGATATCGTTTATTTCTCTTTTTATTAAACTATCACCGGAAGAAA
CACGGTTTGATAAAAA

InterProScan

ProSiteProfiles	Netrin_domain (IPR001134) - T[61-201] 13.783
SUPERFAMILY	TIMP-like_OB-fold (IPR008993) - T[63-142] 3.14E-17 - T[170-197] 3.14E-17
SMART	Netrin_module_non-TIMP (IPR018933) - T[71-168] 6.5E-5
Pfam	Netrin_module_non-TIMP (IPR018933) - T[73-144] 5.9E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value