- Transcript 'KH2012:KH.C4.81.v1.A...' >
- Transcript 'KH2012:KH.C4.370.v3....'
Transcript Model
Transcript Id
KH2012:KH.C4.370.v3.A.SL4-1
Possible name(s)
ADAMTS16; ADAMTS6; ADAMTSL5
Gene model
Location
KhC4 [1,544,149 / 1,557,755]
Amino acid sequence
Length: 611
>KH.C4.370.v3.A.SL4-1
FALNAEMKNHLCITFVCSILAVYHVEGQQVHFINEEELARSQPFARPRVPVQPPLSHVFH
DPLLENPLNPYYDPDFDQTPLTSDQDWSEWTEWSFCSRSCGGGVAMRTRGCGIRSMNDLK
NDCLGEDVQHRICSTQSCSGNEEDFRTSQCARHNHRQVFSSTQFKWVPYYGSDIDPCQLN
CIAEGFNFYKTFGSVQDGTRCYGDQYDVCIEGKCKRVGCDLILGSNLTVDACGVCGGRNT
TCFHYSKTFDELPPNTGNFEYNQIATIPAGATDILITDSTNNYLAVQVDNEGYHEYVFNG
DNVISWPGNFPSAGTIIKYTRTEDDETVSIQGPTTSDLYIQMLYLGDLPMVKYEYRIPHH
VQPPQEQQQLQVDYRVEEPDSGDIPPSWIVDIMGHDETTPPPTTTTTEATTTTATTTTTT
TTTPMPTTLPRPRRNKKNKPPYCVPCKKPKNRKRHYCQSDFVIHARVLSKSKVEGKRYRH
DVTVLSIFKSDFKLMSREYVWVYSSCCPKFRAYRDYLIMGRKRRVEIGNDGRGIWLGANN
GTDATDGRRRFETRLMVDHMDFWHVWKRKYLKGLNKVANSINCSKYKRHATSLRRRDPES
RRRFSRRRAGR
Nucleotide sequence
Length: 2,731
>KH2012:KH.C4.370.v3.A.SL4-1
ATCAGTATTAGTTTGCCTTGAATGCTGAAATGAAAAACCATCTGTGTATTACTTTTGTGT
GTTCTATTCTGGCTGTTTATCATGTTGAGGGCCAGCAAGTTCATTTTATTAATGAGGAAG
AATTAGCTCGATCTCAACCATTTGCTCGACCACGAGTACCAGTTCAGCCACCGCTTAGCC
ACGTTTTTCATGATCCACTGCTAGAGAATCCACTTAATCCTTATTACGACCCAGATTTTG
ATCAGACACCCTTAACATCTGACCAGGATTGGAGTGAGTGGACAGAATGGTCGTTTTGCT
CACGATCTTGTGGAGGAGGGGTTGCCATGAGAACAAGAGGATGTGGAATAAGATCCATGA
ACGACCTTAAAAACGACTGCTTGGGCGAAGATGTTCAACACCGGATCTGCAGTACGCAGT
CGTGTTCCGGAAACGAAGAGGATTTCCGAACGAGTCAGTGCGCACGACACAACCATCGTC
AGGTCTTCAGTTCCACTCAGTTCAAGTGGGTTCCGTATTACGGCAGCGACATTGATCCGT
GCCAACTCAACTGCATCGCTGAAGGTTTTAACTTTTACAAAACCTTCGGGTCTGTGCAAG
ATGGTACAAGGTGCTACGGCGACCAGTATGATGTTTGCATTGAAGGAAAATGCAAGCGGG
TAGGTTGCGATCTGATCCTGGGTTCGAACTTGACGGTTGACGCTTGCGGGGTTTGCGGTG
GTCGTAATACTACTTGCTTCCACTATTCGAAAACTTTTGACGAGCTGCCCCCTAATACAG
GCAATTTTGAATACAACCAGATCGCCACCATTCCTGCAGGAGCAACCGACATTCTTATCA
CAGATTCAACCAATAACTACCTAGCTGTTCAAGTAGACAACGAAGGGTATCATGAATACG
TGTTCAATGGCGACAACGTCATCAGTTGGCCGGGTAATTTCCCTTCTGCGGGAACGATCA
TAAAGTACACAAGGACCGAGGACGATGAGACGGTCTCCATACAGGGCCCAACAACCAGCG
ATCTTTACATCCAGATGCTGTACCTTGGTGACTTACCCATGGTCAAATATGAATACCGGA
TCCCTCACCACGTCCAACCACCCCAGGAACAACAGCAACTACAAGTAGACTACCGAGTCG
AGGAACCAGACAGCGGTGATATTCCACCAAGTTGGATAGTTGATATAATGGGACACGACG
AAACAACCCCACCCCCTACAACTACAACAACAGAAGCAACGACAACAACAGCAACAACAA
CGACAACAACAACAACAACGCCTATGCCCACAACCCTTCCTCGTCCAAGGAGGAACAAAA
AGAACAAGCCCCCTTATTGCGTGCCTTGCAAGAAACCTAAAAATCGCAAGCGACATTACT
GTCAGAGTGATTTCGTGATTCACGCCCGGGTCTTATCCAAGTCAAAAGTTGAAGGCAAGC
GGTATCGACATGACGTCACAGTCCTAAGCATTTTCAAGTCTGACTTTAAACTGATGAGCC
GAGAATACGTGTGGGTATATAGCAGCTGCTGTCCTAAGTTCCGTGCCTACCGCGACTACC
TTATCATGGGAAGGAAGCGACGTGTTGAGATTGGAAATGATGGCCGTGGCATTTGGCTAG
GCGCAAATAACGGTACAGACGCTACAGACGGCCGTCGAAGGTTTGAAACAAGGCTTATGG
TCGATCATATGGATTTCTGGCACGTGTGGAAACGGAAGTACCTTAAAGGTTTAAACAAAG
TTGCGAATTCAATAAACTGCTCTAAGTACAAGCGCCACGCGACAAGCCTACGACGGAGAG
ACCCAGAAAGTCGGCGGCGATTTTCACGACGCCGTGCTGGAAGGTAGACCGAACTGATGT
ATAGTTTTGTAAAATCCAAATCCCGAAGTCGACAATGAAGGTCCCCTTTAGTCAATACTC
CACTCAACTGCCTTCTATTCTGCTAAGGGTTTCATTCGTTGCTTCATTCACGTTCGACCA
CGGCTTCTTCACCTCACCAGCAGCCGTTCACATATTGCCAATACTTTTGTTCCACCTATC
TGTATATGAGACAATCAAACTACATATTTTTTCACTTGCACCGTTTTTAATCCCACCGCG
GGGCAGCCAATGAAAGAGATGCTTCAAATGAATCATTTAGGTTTTTCCAAATAAATCATT
TATTTTTTTCAAATATGTGCGATTAATTAAAAAAGCCTGATGTATAAATGAAATGTTCAT
TGTTTTAAATTGCTGCTATATGGTTTTAATTACTATACTGCTCTGTTTAAATTTTGGTCG
TAATGTTATGAATTGTTTCTTATAATAGTTTTGATAAAGTTTCACTTTTAGACATCTTTT
ATTGCGTAATGTACGAATGTACAGTTTAATGCCGTCCCTTTTAAAAATACCGTTTAAGGT
TTAACATCCTACTAATGCTGTGTGAACACTCCTGTATTTAATTTTAGATTTTTTATTCCC
TTCATAGTGAAAAGATAAAACAACCTAAATGCACTCACATTTACTATAGATACGTTTTGG
TACGTTTTCCAAAGTCGTATTTACTCTTTTTGTATATACATTTTCGTCTCTTTTACTGAA
TCGCTCTGATTTCTTACTTTTGCATATGTTTTATATGAGGTTCGTGGATTTGTTTGATAC
TACTCAATGAAGTATTTAGTTTGTCGGCATTGATATCGTTTATTTCTCTTTTTATTAAAC
TATCACCGGAAGAAACACGGTTTGATAAAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[83-138] 4.2E-12 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[83-138] 1.83E-10 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[84-139] 12.643 |
| SMART |
TSP1_rpt (IPR000884) - T[87-139] 1.8E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[88-138] 8.3E-9 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[258-358] 9.1E-22 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[443-583] 13.783 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[445-524] 2.83E-16 - T[552-579] 2.83E-16 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[453-550] 6.5E-5 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[455-526] 2.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 36.934 % | 193 | 2.43E-52 |
| ATS16_HUMAN | 37.162 % | 198 | 7.73E-54 |
| ATL5_HUMAN | 32.11 % | 224 | 2.93E-66 |