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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L96.81.v1....'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'KH2012:KH.C4.370.v4....'

Transcript Model

Transcript Id

KH2012:KH.C4.370.v4.A.SL5-1

Possible name(s)

ADAMTS16; ADAMTS6; ADAMTSL5

Location

KhC4 [1,545,564 / 1,557,755]

Sequences

Amino acid sequence

Length: 536

>KH.C4.370.v4.A.SL5-1
FDQTPLTSDQDWSEWTEWSFCSRSCGGGVAMRTRGCGIRSMNDLKNDCLGEDVQHRICST
QSCSGNEEDFRTSQCARHNHRQVFSSTQFKWVPYYGSDIDPCQLNCIAEGFNFYKTFGSV
QDGTRCYGDQYDVCIEGKCKRVGCDLILGSNLTVDACGVCGGRNTTCFHYSKTFDELPPN
TGNFEYNQIATIPAGATDILITDSTNNYLAVQVDNEGYHEYVFNGDNVISWPGNFPSAGT
IIKYTRTEDDETVSIQGPTTSDLYIQMLYLGDLPMVKYEYRIPHHVQPPQEQQQLQVDYR
VEEPDSGDIPPSWIVDIMGHDETTPPPTTTTTEATTTTATTTTTTTTTPMPTTLPRPRRN
KKNKPPYCVPCKKPKNRKRHYCQSDFVIHARVLSKSKVEGKRYRHDVTVLSIFKSDFKLM
SREYVWVYSSCCPKFRAYRDYLIMGRKRRVEIGNDGRGIWLGANNGTDATDGRRRFETRL
MVDHMDFWHVWKRKYLKGLNKVANSINCSKYKRHATSLRRRDPESRRRFSRRRAGR

Nucleotide sequence

Length: 2,497

>KH2012:KH.C4.370.v4.A.SL5-1
ATTTTGATCAGACACCCTTAACATCTGACCAGGATTGGAGTGAGTGGACAGAATGGTCGT
TTTGCTCACGATCTTGTGGAGGAGGGGTTGCCATGAGAACAAGAGGATGTGGAATAAGAT
CCATGAACGACCTTAAAAACGACTGCTTGGGCGAAGATGTTCAACACCGGATCTGCAGTA
CGCAGTCGTGTTCCGGAAACGAAGAGGATTTCCGAACGAGTCAGTGCGCACGACACAACC
ATCGTCAGGTCTTCAGTTCCACTCAGTTCAAGTGGGTTCCGTATTACGGCAGCGACATTG
ATCCGTGCCAACTCAACTGCATCGCTGAAGGTTTTAACTTTTACAAAACCTTCGGGTCTG
TGCAAGATGGTACAAGGTGCTACGGCGACCAGTATGATGTTTGCATTGAAGGAAAATGCA
AGCGGGTAGGTTGCGATCTGATCCTGGGTTCGAACTTGACGGTTGACGCTTGCGGGGTTT
GCGGTGGTCGTAATACTACTTGCTTCCACTATTCGAAAACTTTTGACGAGCTGCCCCCTA
ATACAGGCAATTTTGAATACAACCAGATCGCCACCATTCCTGCAGGAGCAACCGACATTC
TTATCACAGATTCAACCAATAACTACCTAGCTGTTCAAGTAGACAACGAAGGGTATCATG
AATACGTGTTCAATGGCGACAACGTCATCAGTTGGCCGGGTAATTTCCCTTCTGCGGGAA
CGATCATAAAGTACACAAGGACCGAGGACGATGAGACGGTCTCCATACAGGGCCCAACAA
CCAGCGATCTTTACATCCAGATGCTGTACCTTGGTGACTTACCCATGGTCAAATATGAAT
ACCGGATCCCTCACCACGTCCAACCACCCCAGGAACAACAGCAACTACAAGTAGACTACC
GAGTCGAGGAACCAGACAGCGGTGATATTCCACCAAGTTGGATAGTTGATATAATGGGAC
ACGACGAAACAACCCCACCCCCTACAACTACAACAACAGAAGCAACGACAACAACAGCAA
CAACAACGACAACAACAACAACAACGCCTATGCCCACAACCCTTCCTCGTCCAAGGAGGA
ACAAAAAGAACAAGCCCCCTTATTGCGTGCCTTGCAAGAAACCTAAAAATCGCAAGCGAC
ATTACTGTCAGAGTGATTTCGTGATTCACGCCCGGGTCTTATCCAAGTCAAAAGTTGAAG
GCAAGCGGTATCGACATGACGTCACAGTCCTAAGCATTTTCAAGTCTGACTTTAAACTGA
TGAGCCGAGAATACGTGTGGGTATATAGCAGCTGCTGTCCTAAGTTCCGTGCCTACCGCG
ACTACCTTATCATGGGAAGGAAGCGACGTGTTGAGATTGGAAATGATGGCCGTGGCATTT
GGCTAGGCGCAAATAACGGTACAGACGCTACAGACGGCCGTCGAAGGTTTGAAACAAGGC
TTATGGTCGATCATATGGATTTCTGGCACGTGTGGAAACGGAAGTACCTTAAAGGTTTAA
ACAAAGTTGCGAATTCAATAAACTGCTCTAAGTACAAGCGCCACGCGACAAGCCTACGAC
GGAGAGACCCAGAAAGTCGGCGGCGATTTTCACGACGCCGTGCTGGAAGGTAGACCGAAC
TGATGTATAGTTTTGTAAAATCCAAATCCCGAAGTCGACAATGAAGGTCCCCTTTAGTCA
ATACTCCACTCAACTGCCTTCTATTCTGCTAAGGGTTTCATTCGTTGCTTCATTCACGTT
CGACCACGGCTTCTTCACCTCACCAGCAGCCGTTCACATATTGCCAATACTTTTGTTCCA
CCTATCTGTATATGAGACAATCAAACTACATATTTTTTCACTTGCACCGTTTTTAATCCC
ACCGCGGGGCAGCCAATGAAAGAGATGCTTCAAATGAATCATTTAGGTTTTTCCAAATAA
ATCATTTATTTTTTTCAAATATGTGCGATTAATTAAAAAAGCCTGATGTATAAATGAAAT
GTTCATTGTTTTAAATTGCTGCTATATGGTTTTAATTACTATACTGCTCTGTTTAAATTT
TGGTCGTAATGTTATGAATTGTTTCTTATAATAGTTTTGATAAAGTTTCACTTTTAGACA
TCTTTTATTGCGTAATGTACGAATGTACAGTTTAATGCCGTCCCTTTTAAAAATACCGTT
TAAGGTTTAACATCCTACTAATGCTGTGTGAACACTCCTGTATTTAATTTTAGATTTTTT
ATTCCCTTCATAGTGAAAAGATAAAACAACCTAAATGCACTCACATTTACTATAGATACG
TTTTGGTACGTTTTCCAAAGTCGTATTTACTCTTTTTGTATATACATTTTCGTCTCTTTT
ACTGAATCGCTCTGATTTCTTACTTTTGCATATGTTTTATATGAGGTTCGTGGATTTGTT
TGATACTACTCAATGAAGTATTTAGTTTGTCGGCATTGATATCGTTTATTTCTCTTTTTA
TTAAACTATCACCGGAAGAAACACGGTTTGATAAAAA

InterProScan

Gene3D
TSP1_rpt_sf (IPR036383) - T[8-63] 3.5E-12
SUPERFAMILY
TSP1_rpt_sf (IPR036383) - T[8-63] 1.57E-10
ProSiteProfiles
TSP1_rpt (IPR000884) - T[9-64] 12.643
SMART
TSP1_rpt (IPR000884) - T[12-64] 1.8E-8
Pfam
TSP1_rpt (IPR000884) - T[13-63] 7.0E-9
Pfam
ADAM_spacer1 (IPR010294) - T[183-283] 7.4E-22
ProSiteProfiles
Netrin_domain (IPR001134) - T[368-508] 13.783
SUPERFAMILY
TIMP-like_OB-fold (IPR008993) - T[370-449] 2.2E-16 - T[477-504] 2.2E-16
SMART
Netrin_module_non-TIMP (IPR018933) - T[378-475] 6.5E-5
Pfam
Netrin_module_non-TIMP (IPR018933) - T[380-451] 2.5E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATS6_HUMAN 36.934 % 192 1.08E-52
ATS16_HUMAN 37.162 % 197 2.78E-54
ATL5_HUMAN 32.265 % 224 3.03E-67