- Transcript 'KH2012:KH.C4.370.v4....'
Transcript Model
Transcript Id
KH2012:KH.C4.370.v4.A.SL5-1
Possible name(s)
ADAMTS16; ADAMTS6; ADAMTSL5
Gene model
Location
KhC4 [1,545,564 / 1,557,755]
Amino acid sequence
Length: 536
>KH.C4.370.v4.A.SL5-1
FDQTPLTSDQDWSEWTEWSFCSRSCGGGVAMRTRGCGIRSMNDLKNDCLGEDVQHRICST
QSCSGNEEDFRTSQCARHNHRQVFSSTQFKWVPYYGSDIDPCQLNCIAEGFNFYKTFGSV
QDGTRCYGDQYDVCIEGKCKRVGCDLILGSNLTVDACGVCGGRNTTCFHYSKTFDELPPN
TGNFEYNQIATIPAGATDILITDSTNNYLAVQVDNEGYHEYVFNGDNVISWPGNFPSAGT
IIKYTRTEDDETVSIQGPTTSDLYIQMLYLGDLPMVKYEYRIPHHVQPPQEQQQLQVDYR
VEEPDSGDIPPSWIVDIMGHDETTPPPTTTTTEATTTTATTTTTTTTTPMPTTLPRPRRN
KKNKPPYCVPCKKPKNRKRHYCQSDFVIHARVLSKSKVEGKRYRHDVTVLSIFKSDFKLM
SREYVWVYSSCCPKFRAYRDYLIMGRKRRVEIGNDGRGIWLGANNGTDATDGRRRFETRL
MVDHMDFWHVWKRKYLKGLNKVANSINCSKYKRHATSLRRRDPESRRRFSRRRAGR
Nucleotide sequence
Length: 2,497
>KH2012:KH.C4.370.v4.A.SL5-1
ATTTTGATCAGACACCCTTAACATCTGACCAGGATTGGAGTGAGTGGACAGAATGGTCGT
TTTGCTCACGATCTTGTGGAGGAGGGGTTGCCATGAGAACAAGAGGATGTGGAATAAGAT
CCATGAACGACCTTAAAAACGACTGCTTGGGCGAAGATGTTCAACACCGGATCTGCAGTA
CGCAGTCGTGTTCCGGAAACGAAGAGGATTTCCGAACGAGTCAGTGCGCACGACACAACC
ATCGTCAGGTCTTCAGTTCCACTCAGTTCAAGTGGGTTCCGTATTACGGCAGCGACATTG
ATCCGTGCCAACTCAACTGCATCGCTGAAGGTTTTAACTTTTACAAAACCTTCGGGTCTG
TGCAAGATGGTACAAGGTGCTACGGCGACCAGTATGATGTTTGCATTGAAGGAAAATGCA
AGCGGGTAGGTTGCGATCTGATCCTGGGTTCGAACTTGACGGTTGACGCTTGCGGGGTTT
GCGGTGGTCGTAATACTACTTGCTTCCACTATTCGAAAACTTTTGACGAGCTGCCCCCTA
ATACAGGCAATTTTGAATACAACCAGATCGCCACCATTCCTGCAGGAGCAACCGACATTC
TTATCACAGATTCAACCAATAACTACCTAGCTGTTCAAGTAGACAACGAAGGGTATCATG
AATACGTGTTCAATGGCGACAACGTCATCAGTTGGCCGGGTAATTTCCCTTCTGCGGGAA
CGATCATAAAGTACACAAGGACCGAGGACGATGAGACGGTCTCCATACAGGGCCCAACAA
CCAGCGATCTTTACATCCAGATGCTGTACCTTGGTGACTTACCCATGGTCAAATATGAAT
ACCGGATCCCTCACCACGTCCAACCACCCCAGGAACAACAGCAACTACAAGTAGACTACC
GAGTCGAGGAACCAGACAGCGGTGATATTCCACCAAGTTGGATAGTTGATATAATGGGAC
ACGACGAAACAACCCCACCCCCTACAACTACAACAACAGAAGCAACGACAACAACAGCAA
CAACAACGACAACAACAACAACAACGCCTATGCCCACAACCCTTCCTCGTCCAAGGAGGA
ACAAAAAGAACAAGCCCCCTTATTGCGTGCCTTGCAAGAAACCTAAAAATCGCAAGCGAC
ATTACTGTCAGAGTGATTTCGTGATTCACGCCCGGGTCTTATCCAAGTCAAAAGTTGAAG
GCAAGCGGTATCGACATGACGTCACAGTCCTAAGCATTTTCAAGTCTGACTTTAAACTGA
TGAGCCGAGAATACGTGTGGGTATATAGCAGCTGCTGTCCTAAGTTCCGTGCCTACCGCG
ACTACCTTATCATGGGAAGGAAGCGACGTGTTGAGATTGGAAATGATGGCCGTGGCATTT
GGCTAGGCGCAAATAACGGTACAGACGCTACAGACGGCCGTCGAAGGTTTGAAACAAGGC
TTATGGTCGATCATATGGATTTCTGGCACGTGTGGAAACGGAAGTACCTTAAAGGTTTAA
ACAAAGTTGCGAATTCAATAAACTGCTCTAAGTACAAGCGCCACGCGACAAGCCTACGAC
GGAGAGACCCAGAAAGTCGGCGGCGATTTTCACGACGCCGTGCTGGAAGGTAGACCGAAC
TGATGTATAGTTTTGTAAAATCCAAATCCCGAAGTCGACAATGAAGGTCCCCTTTAGTCA
ATACTCCACTCAACTGCCTTCTATTCTGCTAAGGGTTTCATTCGTTGCTTCATTCACGTT
CGACCACGGCTTCTTCACCTCACCAGCAGCCGTTCACATATTGCCAATACTTTTGTTCCA
CCTATCTGTATATGAGACAATCAAACTACATATTTTTTCACTTGCACCGTTTTTAATCCC
ACCGCGGGGCAGCCAATGAAAGAGATGCTTCAAATGAATCATTTAGGTTTTTCCAAATAA
ATCATTTATTTTTTTCAAATATGTGCGATTAATTAAAAAAGCCTGATGTATAAATGAAAT
GTTCATTGTTTTAAATTGCTGCTATATGGTTTTAATTACTATACTGCTCTGTTTAAATTT
TGGTCGTAATGTTATGAATTGTTTCTTATAATAGTTTTGATAAAGTTTCACTTTTAGACA
TCTTTTATTGCGTAATGTACGAATGTACAGTTTAATGCCGTCCCTTTTAAAAATACCGTT
TAAGGTTTAACATCCTACTAATGCTGTGTGAACACTCCTGTATTTAATTTTAGATTTTTT
ATTCCCTTCATAGTGAAAAGATAAAACAACCTAAATGCACTCACATTTACTATAGATACG
TTTTGGTACGTTTTCCAAAGTCGTATTTACTCTTTTTGTATATACATTTTCGTCTCTTTT
ACTGAATCGCTCTGATTTCTTACTTTTGCATATGTTTTATATGAGGTTCGTGGATTTGTT
TGATACTACTCAATGAAGTATTTAGTTTGTCGGCATTGATATCGTTTATTTCTCTTTTTA
TTAAACTATCACCGGAAGAAACACGGTTTGATAAAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[8-63] 3.5E-12 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[8-63] 1.57E-10 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[9-64] 12.643 |
| SMART |
TSP1_rpt (IPR000884) - T[12-64] 1.8E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[13-63] 7.0E-9 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[183-283] 7.4E-22 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[368-508] 13.783 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[370-449] 2.2E-16 - T[477-504] 2.2E-16 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[378-475] 6.5E-5 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[380-451] 2.5E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 36.934 % | 192 | 1.08E-52 |
| ATS16_HUMAN | 37.162 % | 197 | 2.78E-54 |
| ATL5_HUMAN | 32.265 % | 224 | 3.03E-67 |