Aniseed - Transcript Card

Transcript 'KH2012:KH.C4.378.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.378.v1.A.ND1-1

Possible name(s)

INSM1; INSM2; ZNF3

Gene model

KH2012:KH.C4.378

Location

KhC4 [1,050,440 / 1,053,751]

Sequences

Amino acid sequence

Length: 496

>KH.C4.378.v1.A.ND1-1
MYLNEAGSPDSGYRSSSNDETEAKQDNSSIPHTQDIKAQEPDTAAVEDELRTNKNNPDKE
VSEKLNVCDETHEKSTRKRRSVKQTISTDEENTSPVLGIRILPAEQFNKDNTHRNDERMK
STNVSVDTVSSTATTENSSKFTCRLCCASYGDCLSLARHKCARMVNVKYECSECGKVFGC
PANLASHKRWHKPQEMNRKCETSKKNKRKKVTKDNDDVTEGLLPFVNLKAVKEKHEASVS
PSSPLSTTSEASQKFDNEPGNYDSRIKAIYPCPGCKRRFRRQSNRRKHALIKHGLDLGGS
PARSRTAKPQNANGSKQAGARTNAHRSLDAPPSNCSLSTLALAAETLDNGESSEDYNPLA
QQSSFSSKTNPSVPRHEESDYPLDLRVRAPASTASNIAHSVANITNKGKSSKKHDPSYTV
HSSFIAYPVPELVYPNSPMAPHAFTGYQNVQPVGQLLNSAYVPSPVGWPMSRYPYGDDAL
SVLNMSHLLASIHYRM

Nucleotide sequence

Length: 1,536

>KH2012:KH.C4.378.v1.A.ND1-1
ATGTATTTAAATGAGGCTGGCTCACCGGATTCCGGGTACAGATCGAGCAGTAACGATGAA
ACTGAAGCAAAGCAAGATAATTCTTCTATTCCTCACACGCAAGATATCAAGGCACAAGAA
CCAGACACTGCAGCGGTTGAAGATGAACTGCGAACCAATAAAAACAATCCAGACAAAGAA
GTCAGTGAAAAGTTGAATGTATGTGACGAAACTCATGAAAAATCAACTCGCAAGAGACGG
AGTGTAAAGCAGACAATAAGTACAGACGAAGAAAATACGTCGCCAGTATTAGGTATTCGG
ATTCTACCAGCTGAACAATTCAACAAAGACAATACACACCGGAACGATGAAAGAATGAAA
TCTACAAACGTGTCAGTTGACACAGTCTCATCGACAGCAACAACAGAAAATTCGTCCAAG
TTTACCTGCCGACTTTGCTGCGCATCTTACGGTGACTGTTTGTCATTAGCCCGCCATAAA
TGCGCACGAATGGTGAACGTGAAATACGAATGTTCAGAATGTGGGAAAGTCTTCGGTTGC
CCAGCCAACTTAGCCTCCCATAAAAGGTGGCACAAACCTCAAGAAATGAACCGAAAGTGC
GAAACCAGCAAGAAAAACAAACGTAAAAAAGTGACTAAAGATAATGATGACGTCACAGAG
GGGTTGTTGCCGTTTGTTAATTTAAAAGCTGTCAAGGAGAAACATGAAGCATCCGTGTCA
CCGTCGTCTCCACTCAGCACAACGTCCGAAGCTTCACAAAAATTTGACAACGAACCGGGA
AATTACGATAGTCGAATAAAAGCAATTTATCCATGCCCGGGTTGCAAGCGAAGGTTTCGT
CGCCAATCCAACAGAAGGAAACACGCGTTAATTAAGCATGGCTTGGACCTTGGTGGCAGC
CCAGCCCGAAGCCGCACTGCCAAACCACAGAACGCAAACGGTTCAAAGCAAGCAGGAGCT
CGAACGAATGCTCACCGGTCATTGGATGCACCACCAAGCAACTGCAGTTTATCAACTCTA
GCTTTAGCTGCAGAAACACTTGATAATGGCGAGTCTTCTGAAGACTACAACCCTTTAGCT
CAGCAAAGCAGTTTTTCTTCGAAAACAAATCCAAGTGTACCACGTCACGAAGAATCCGAT
TACCCGCTCGATCTTCGAGTCAGAGCTCCAGCAAGCACAGCATCGAACATTGCCCATAGC
GTTGCTAATATTACCAACAAGGGAAAATCATCGAAAAAACACGATCCTAGTTACACTGTC
CACAGTTCTTTTATTGCTTACCCAGTACCAGAGTTAGTTTATCCAAATTCGCCAATGGCT
CCCCATGCTTTTACAGGCTACCAAAATGTACAGCCTGTTGGCCAACTGTTGAACTCCGCG
TACGTTCCCAGCCCAGTGGGCTGGCCTATGTCGAGGTACCCATATGGGGACGACGCCCTT
TCTGTTTTAAATATGAGCCATTTGCTTGCATCTATACATTACCGCATGTGATTTGTTACA
GAACGTGAGAATAAAATGCACGGAATTCGGGACTAA

InterProScan

SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[141-191] 2.36E-6
SMART	Znf_C2H2_type (IPR013087) - T[169-191] 0.48 - T[270-293] 0.3
ProSiteProfiles	Znf_C2H2_type (IPR013087) - T[169-196] 12.591 - T[270-293] 8.912
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[171-191] . - T[272-293] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
INSM1_HUMAN	38.136 %	93.2	2.94E-20
INSM2_HUMAN	26.552 %	97.1	2.44E-21