- Transcript 'KH2012:KH.C4.435.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.435.v2.A.nonSL11-1
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
KhC4 [854,166 / 868,885]
Amino acid sequence
Length: 1,693
>KH.C4.435.v2.A.nonSL11-1
PNRSQASHTTIAVAQSSQVVDHNVETKSGDIVVKQILTSADGSLSHVRRTKGRNSINDIN
SAEFYSSCPKSDATDQVTVIEVTAKECFSNSVCVAEVRRSSSLCRRATTTETQQVLPTNC
LHHSQVKTTVVSDQISHEILLNGTNLRGSSQYRVSYSNDFNKPVTSPGITQDYLRPPRCQ
SSINLQENVDKTTSFRTKRNSFLCSSQANILKLKLRNSVRNPASEHDPSYRKRLCKSLTN
ITADDLLSAPCASIYDSNLDNSQESKSSQSDLLASRMRTNRTELLPEDLQKPNNINFTVG
DLNAVNSKKEVPPSQSNSTKKLKHEGKRRVDDEMSQSVPTRLQNDGVKLTSDNKSKLLSS
RKTPKLSKTLFPFMRKNRKRQNNMAENATGKPMKAKGTINNKNASDSATNKISKKDNGNN
ISAEPSKSHLTNTNTSFPQKDGMGSVGFRKLKITSQQNDRNVHADYATRVTRVRRRSSND
SEDKRSREESEGNRKPYEKVILREKPRPRRQTSRRSTEDISKSATSTDDVLLLRHSLNDP
ELFLQSDPTSSQGNFTFEKVHDSVQSDGFKLRNHSVAQTEGLDQQTHQQVINRCSLNIDY
LRSSNYLDRMSFIRSIPGPETTLNGSICGSMTGISTPCSSILTIGIGTAARCSLASSYAS
VFEDDRNISDVRNVSCEIGDPEARADSFVKPDPPKQLRRAKSLYNPPNLQLRQFNRRSVS
PTLQDDLFESMKLKTSNPENFRTTARPPQPNKPTTPKPRKMSASGSCSSLNMFNFRLSQQ
NICNTNEPVAICRPASYQYNQEIVADSGEPRSKISAKNSSIRRRMSLQLLKPTNRDMKAI
PIVSQLNDEYKRHSIAGLDAEKVKTAMTRWSAISNNMSSSNRSSRRRIRPLSEVQNFRWD
VQAIPEHNEITSPCNEEIISKLPSTLPRPKTKPDSATPTSGNGCVRKVPPKTKKVSISEV
NSTYEANDFEILPRLSFIGSSFSQEELSSRTPFDQEILVETCHLRKALSVIGGINTMPDS
LLHFYPTKYYNEIGNRTFHSYYGVRGQQVHDERCRIQGSMSGISTESGYGTMTRNGTRLR
TPDNEEDAVFVNSNSNQLGGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMS
NADWWWGELDSVEGWFPATFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFS
RVTSFNDICQCTEQRSTTSIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARK
ASITRDQIRANVIKEIVNSEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDI
YLFQRDFAAELEASVDSSSVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFK
KYVHFFEACRLLQKMIDIPLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALE
AMKGVAHMINERKRKMENVRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKP
KSRVAFLFDHQMILCKKDLLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSS
LGSCQGWKVTDTTTGESGLMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSV
LQNSLTVSRKPKEASTQRLAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTP
FRRTHTRESSFVF
Nucleotide sequence
Length: 5,562
>KH2012:KH.C4.435.v2.A.nonSL11-1
ACCGAATCGCTCGCAGGCTTCACATACGACCATTGCTGTCGCCCAGTCATCACAGGTAGT
CGATCATAACGTGGAAACTAAGAGCGGTGATATAGTCGTAAAGCAGATTTTAACGAGCGC
CGATGGCTCTCTCTCCCATGTAAGACGAACGAAGGGTCGCAATTCGATTAACGATATCAA
TTCCGCTGAATTTTATAGCTCCTGCCCGAAGTCTGACGCAACAGACCAAGTGACTGTAAT
TGAAGTGACAGCTAAAGAATGCTTTTCAAACTCGGTGTGCGTGGCCGAAGTGAGAAGAAG
TTCGTCATTGTGTAGGCGAGCGACAACAACAGAAACGCAGCAAGTGCTACCAACAAACTG
TCTGCATCATAGTCAAGTTAAAACTACAGTAGTCAGCGACCAAATCAGCCATGAGATTTT
ACTCAATGGTACAAATCTAAGAGGAAGTTCGCAATATCGGGTTTCCTACTCAAACGATTT
CAACAAGCCAGTAACTAGTCCCGGAATAACTCAGGATTATCTCAGGCCACCTCGCTGCCA
GTCGTCGATCAATCTGCAGGAGAACGTGGATAAAACCACAAGTTTCCGAACAAAGAGAAA
CTCGTTCCTGTGTTCGTCACAAGCCAATATACTCAAGCTTAAACTAAGAAACAGTGTCCG
AAATCCTGCGAGCGAGCACGATCCGTCGTACAGGAAAAGGCTTTGTAAATCCTTAACAAA
CATTACCGCCGACGATTTACTTAGTGCTCCATGCGCTTCTATTTATGATTCGAATTTGGA
TAATTCACAAGAAAGCAAAAGTTCCCAAAGCGATTTGTTAGCAAGCCGTATGCGGACAAA
TCGGACGGAACTTCTCCCCGAAGACCTGCAAAAGCCAAACAACATTAATTTCACGGTCGG
TGATTTAAACGCTGTCAATTCAAAGAAAGAAGTCCCACCTTCCCAATCTAACTCAACCAA
GAAGTTAAAACACGAAGGCAAAAGAAGGGTTGACGACGAAATGTCTCAATCCGTTCCAAC
TCGCTTGCAAAATGATGGCGTTAAATTGACCAGTGACAACAAAAGTAAACTTCTATCATC
CAGAAAGACGCCTAAGCTGTCGAAGACGCTATTTCCTTTCATGCGTAAAAACCGCAAGCG
CCAGAACAACATGGCAGAAAACGCCACAGGAAAACCGATGAAGGCGAAAGGGACAATCAA
CAACAAGAATGCATCAGATTCAGCAACCAATAAGATTAGTAAGAAAGACAATGGAAATAA
CATTTCGGCCGAGCCTTCCAAATCTCACTTAACTAACACAAATACTTCCTTTCCACAAAA
AGACGGAATGGGTTCCGTAGGATTTCGTAAACTAAAGATAACTTCACAGCAAAATGATAG
GAACGTACACGCTGATTACGCTACACGAGTTACAAGGGTACGACGCCGGTCATCCAATGA
TTCGGAAGACAAAAGATCCCGGGAAGAATCTGAAGGGAATAGAAAACCATACGAAAAAGT
TATACTGCGCGAAAAACCTCGTCCGAGGCGTCAAACTTCTCGGAGAAGTACGGAAGACAT
TTCCAAGTCAGCCACTTCAACGGATGACGTACTTCTCTTACGTCATAGTTTAAATGACCC
CGAACTATTCCTCCAATCTGACCCGACCTCCAGTCAAGGAAACTTCACCTTCGAAAAGGT
TCACGATTCCGTTCAAAGTGATGGTTTCAAGCTTCGTAACCACAGCGTCGCTCAAACAGA
AGGCTTAGACCAGCAGACTCACCAACAAGTGATAAACAGATGCTCTCTCAACATTGATTA
CCTCCGCTCATCTAACTACCTGGACCGTATGAGTTTCATCAGGTCAATCCCTGGCCCGGA
AACTACACTCAACGGGAGCATATGTGGAAGCATGACAGGGATAAGTACTCCCTGCTCATC
TATCCTCACCATAGGGATCGGAACAGCTGCGAGATGCAGCCTCGCATCCAGCTACGCGTC
AGTGTTTGAAGATGACAGGAACATTTCGGATGTTCGAAACGTGTCATGTGAGATTGGCGA
TCCGGAGGCGAGAGCTGACTCTTTTGTGAAACCGGACCCACCAAAGCAGCTCCGAAGAGC
AAAATCCTTATACAACCCGCCGAACTTACAGTTGCGCCAGTTCAACCGTAGATCTGTATC
CCCAACCTTACAAGATGATCTTTTTGAATCGATGAAATTGAAAACATCCAATCCAGAAAA
CTTTCGCACAACAGCCAGACCACCCCAACCAAACAAACCAACCACCCCAAAACCTCGGAA
AATGAGCGCCAGTGGAAGTTGTTCATCTCTTAATATGTTTAATTTCCGATTATCCCAGCA
GAACATTTGCAACACAAATGAACCAGTGGCAATATGTCGACCCGCATCGTACCAATATAA
CCAAGAAATAGTTGCGGATTCGGGGGAACCCCGCAGCAAAATCTCTGCCAAGAACTCCTC
CATCCGAAGGCGAATGTCACTTCAACTCTTAAAACCAACCAACCGTGACATGAAAGCAAT
TCCAATCGTATCACAGTTAAACGACGAATACAAGCGTCACTCAATCGCTGGTTTAGACGC
CGAAAAGGTTAAGACAGCCATGACAAGATGGAGCGCTATCAGCAACAACATGTCCTCTTC
AAATAGAAGTTCACGTCGAAGAATTCGTCCATTATCCGAGGTTCAAAACTTCAGATGGGA
TGTTCAAGCCATTCCCGAGCATAACGAAATAACAAGTCCATGCAATGAAGAAATAATCTC
CAAACTACCGTCCACTCTTCCGCGACCGAAAACTAAACCAGACTCCGCTACGCCAACAAG
CGGAAATGGGTGTGTCCGCAAGGTGCCACCAAAGACGAAAAAAGTTTCGATTTCTGAAGT
GAACTCGACTTACGAAGCAAACGACTTTGAGATATTACCTCGTCTATCATTCATTGGATC
TAGTTTTAGCCAAGAAGAACTTTCTTCTCGAACACCATTTGACCAGGAAATTTTGGTTGA
AACTTGCCACCTTCGTAAAGCATTATCCGTTATTGGTGGAATTAACACGATGCCAGATAG
CTTACTGCACTTTTATCCTACTAAGTATTACAACGAAATTGGCAATCGAACGTTCCACTC
ATACTATGGTGTTCGAGGGCAGCAAGTTCACGATGAAAGATGTCGAATCCAAGGAAGCAT
GTCTGGTATTTCGACCGAATCGGGTTACGGGACCATGACAAGGAATGGAACACGCTTGAG
AACTCCTGATAATGAAGAGGACGCGGTGTTTGTGAACTCAAATTCGAACCAACTGGGTGG
CGGAACTTCAGCTCAGCAGACAAATGGAGTCTTCGTGGAAGCATTGTGGGATCACGTGAC
CATGGACCCTGATGAGCTTGGATTTAAAGTTGGTGACGTCATACGTGTAAATGACATGTC
GAATGCTGATTGGTGGTGGGGGGAACTCGATTCTGTGGAAGGGTGGTTTCCCGCTACCTT
TGTTAGGATTCTCGTCAACCAGCAAATCCGTACAGATTCAAACAATAGTGACATCATTGT
TTCGTCATACGCAAGCTCACAAAGCGAGGACGAAATCTCAGTGACGTCACACGAGTTTTC
ACGCGTGACGTCATTTAACGACATTTGCCAATGCACAGAGCAACGTTCGACGACATCCAT
TCATTGCAATGTTTGCGGGAGACCACTGACCGATGCGACGCCAGCCAGCAGGGCGTCGAT
CGCCAACCAAACCAAACAGCCAGAGATTGTAATAACGAAACCTCCTTCCAACGCCCGCAA
AGCTTCCATTACACGAGACCAAATTCGTGCAAACGTCATCAAAGAAATAGTCAATTCCGA
AAAAGTATTTGTCGGTCACCTCAAAGACGTAGTACAGGGCTACCTGACTCGTTGCCGAAA
CCGCTCCGACATGTTTACAGACGAAGAACTCAACACTTTGTTTGGAAACATAGAAGACAT
CTATCTGTTCCAACGGGACTTCGCTGCCGAGCTTGAGGCGTCAGTCGATTCGTCCTCAGT
ACACACAACCGAACTAGGAAATGTTTTTCTAAAACACAAAGACGGCTTCTGCATATACTC
GGAATATTGTAACAACCATCCACAAGCACTAGCGGAGTTGGCACATTTGTTGACCTTCAA
AAAATACGTTCATTTTTTCGAAGCTTGTCGATTATTACAAAAAATGATTGACATTCCATT
AGATGGATTCCTTTTAACTCCTGTCCAGAAAATCTGCAAATACCCGTTGCAGTTGGCGGA
ACTTTTAAAGTACACTCACCCCGAGCACCAGGATTACGATGCCGTTAAATCTGCATTAGA
AGCAATGAAGGGCGTTGCCCACATGATCAATGAACGTAAAAGAAAGATGGAAAACGTGAG
AAAGATATCTCAGTGGCAAGCAAGCATCGTCAATTGGCAGGGTGAGAGCGTGCTTTCCAG
GAGTAGTGAGTTGGTACATTCCGGGGAGGTATATGCGTTGTCGCAAGTTAAATCTAAACC
CAAATCACGAGTCGCTTTCTTGTTTGATCATCAAATGATTCTCTGCAAAAAGGATTTGCT
TCGTCGCGATCTCCTATATTACAAAGCTCGCATCGACTTGGACGCTGTTGAAGTGAGTGC
CACCGAACCAGACTCACCTAAATCCTCACATTCCGGGAATGACTGGCATTCATCGTCAAG
TTTAGGCTCATGCCAAGGCTGGAAGGTTACAGACACGACCACTGGCGAGTCCGGTTTAAT
GTACTGCAAGAATCCAGATGACTGTGGAAAGTGGATGAAAGCGTTCGCACTTGAAAGAAA
AATAGCTGAAACCAAAGCAAGTGGGACGCCTCTCCCAACCGAAGCATATTCTCTCAGCGT
GTTGCAGAACTCCTTGACAGTCTCCAGAAAGCCAAAAGAGGCGAGTACACAGAGGCTTGC
GCCTTCGTATCGATACCGCATAAAAATGGCACAAGAAGTGCAAGAATTGTCGGCAAAGCA
GACCAACTATGGGTCGGAGAAGTCTGGTTTTTTCAGCAGCGTCGCAGGAAAGCTCACTCC
ATTCCGTCGCACACATACACGGGAAAGCAGCTTCGTATTTTAACTTCCAAGGGATTTTAA
ATTTCACCGCGAACTTATTTGTTTCACAGTATTTTTGCACACGTTATATTGTACAGTCTC
TAGAAAAGACGAAGCCGTGTCGAACTTGTGTGCTTCCGCTTTTGTAAATCTGTATAAACA
ATAGAAGAGAATATTGTAGTCATAAAATTGGAGTTCACTTTTAAAGTTATATTTTATTAA
AAAGTGAGCCTGAACTGCGTCAAAGAAAGCAGGGCGCGTTTGCTGTGTGTATTTTACCAC
CAACTTGTTTTTATTGATTTCCACTGTGTTTACCTCACCGCCTATACGTTCCCAGTCGTG
TTACTTCGGCTACAGGCCACACGACTGTTTTACTTTTATCTAAGAACATTGCTTCTTTTG
CACGTGCAATTTTGACTTCGCTCACGCCATGCCACGATTTGCTGTTACTCTCCACAATAA
ACGCCCAAAACTAAATCAAATTGTATTTTTGGATCAGAAATC
| ProSiteProfiles |
SH3_domain (IPR001452) - T[1107-1166] 14.252 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[1107-1183] 3.81E-20 |
| SMART |
SH3_domain (IPR001452) - T[1110-1165] 9.5E-18 |
| Pfam |
SH3_domain (IPR001452) - T[1114-1161] 8.9E-11 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[1242-1474] 8.0E-80 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[1254-1473] 3.01E-58 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[1268-1452] 32.137 |
| CDD |
DH-domain (IPR000219) - T[1269-1450] 4.54643E-58 |
| SMART |
DH-domain (IPR000219) - T[1272-1451] 2.0E-61 |
| Pfam |
DH-domain (IPR000219) - T[1272-1450] 7.1E-44 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[1400-1425] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1475-1639] 2.9E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[1483-1600] 7.014 |
| SMART |
PH_domain (IPR001849) - T[1484-1602] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 47.454 % | 397 | 4.49E-121 |
| SPT13_HUMAN | 46.37 % | 391 | 1.92E-119 |
| ARHG9_HUMAN | 43.511 % | 428 | 1.14E-134 |