- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C4.163.v1....' >
- Transcript 'Cisavi.CG.ENS81.R285...' >
- Molecular Tool 'Ci-FoxD::Ci-Tbx6b' >
- Transcript 'KH2012:KH.C4.435.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.435.v2.A.nonSL5-1
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
KhC4 [854,189 / 868,885]
Amino acid sequence
Length: 1,685
>KH.C4.435.v2.A.nonSL5-1
TTIAVAQSSQVVDHNVETKSGDIVVKQILTSADGSLSHVRRTKGRNSINDINSAEFYSSC
PKSDATDQVTVIEVTAKECFSNSVCVAEVRRSSSLCRRATTTETQQVLPTNCLHHSQVKT
TVVSDQISHEILLNGTNLRGSSQYRVSYSNDFNKPVTSPGITQDYLRPPRCQSSINLQEN
VDKTTSFRTKRNSFLCSSQANILKLKLRNSVRNPASEHDPSYRKRLCKSLTNITADDLLS
APCASIYDSNLDNSQESKSSQSDLLASRMRTNRTELLPEDLQKPNNINFTVGDLNAVNSK
KEVPPSQSNSTKKLKHEGKRRVDDEMSQSVPTRLQNDGVKLTSDNKSKLLSSRKTPKLSK
TLFPFMRKNRKRQNNMAENATGKPMKAKGTINNKNASDSATNKISKKDNGNNISAEPSKS
HLTNTNTSFPQKDGMGSVGFRKLKITSQQNDRNVHADYATRVTRVRRRSSNDSEDKRSRE
ESEGNRKPYEKVILREKPRPRRQTSRRSTEDISKSATSTDDVLLLRHSLNDPELFLQSDP
TSSQGNFTFEKVHDSVQSDGFKLRNHSVAQTEGLDQQTHQQVINRCSLNIDYLRSSNYLD
RMSFIRSIPGPETTLNGSICGSMTGISTPCSSILTIGIGTAARCSLASSYASVFEDDRNI
SDVRNVSCEIGDPEARADSFVKPDPPKQLRRAKSLYNPPNLQLRQFNRRSVSPTLQDDLF
ESMKLKTSNPENFRTTARPPQPNKPTTPKPRKMSASGSCSSLNMFNFRLSQQNICNTNEP
VAICRPASYQYNQEIVADSGEPRSKISAKNSSIRRRMSLQLLKPTNRDMKAIPIVSQLND
EYKRHSIAGLDAEKVKTAMTRWSAISNNMSSSNRSSRRRIRPLSEVQNFRWDVQAIPEHN
EITSPCNEEIISKLPSTLPRPKTKPDSATPTSGNGCVRKVPPKTKKVSISEVNSTYEAND
FEILPRLSFIGSSFSQEELSSRTPFDQEILVETCHLRKALSVIGGINTMPDSLLHFYPTK
YYNEIGNRTFHSYYGVRGQQVHDERCRIQGSMSGISTESGYGTMTRNGTRLRTPDNEEDA
VFVNSNSNQLGGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMSNADWWWGE
LDSVEGWFPATFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFSRVTSFNDI
CQCTEQRSTTSIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARKASITRDQI
RANVIKEIVNSEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDIYLFQRDFA
AELEASVDSSSVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFKKYVHFFEA
CRLLQKMIDIPLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALEAMKGVAHM
INERKRKMENVRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKPKSRVAFLF
DHQMILCKKDLLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSSLGSCQGWK
VTDTTTGESGLMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSVLQNSLTVS
RKPKEASTQRLAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTPFRRTHTRE
SSFVF
Nucleotide sequence
Length: 5,539
>KH2012:KH.C4.435.v2.A.nonSL5-1
ATACGACCATTGCTGTCGCCCAGTCATCACAGGTAGTCGATCATAACGTGGAAACTAAGA
GCGGTGATATAGTCGTAAAGCAGATTTTAACGAGCGCCGATGGCTCTCTCTCCCATGTAA
GACGAACGAAGGGTCGCAATTCGATTAACGATATCAATTCCGCTGAATTTTATAGCTCCT
GCCCGAAGTCTGACGCAACAGACCAAGTGACTGTAATTGAAGTGACAGCTAAAGAATGCT
TTTCAAACTCGGTGTGCGTGGCCGAAGTGAGAAGAAGTTCGTCATTGTGTAGGCGAGCGA
CAACAACAGAAACGCAGCAAGTGCTACCAACAAACTGTCTGCATCATAGTCAAGTTAAAA
CTACAGTAGTCAGCGACCAAATCAGCCATGAGATTTTACTCAATGGTACAAATCTAAGAG
GAAGTTCGCAATATCGGGTTTCCTACTCAAACGATTTCAACAAGCCAGTAACTAGTCCCG
GAATAACTCAGGATTATCTCAGGCCACCTCGCTGCCAGTCGTCGATCAATCTGCAGGAGA
ACGTGGATAAAACCACAAGTTTCCGAACAAAGAGAAACTCGTTCCTGTGTTCGTCACAAG
CCAATATACTCAAGCTTAAACTAAGAAACAGTGTCCGAAATCCTGCGAGCGAGCACGATC
CGTCGTACAGGAAAAGGCTTTGTAAATCCTTAACAAACATTACCGCCGACGATTTACTTA
GTGCTCCATGCGCTTCTATTTATGATTCGAATTTGGATAATTCACAAGAAAGCAAAAGTT
CCCAAAGCGATTTGTTAGCAAGCCGTATGCGGACAAATCGGACGGAACTTCTCCCCGAAG
ACCTGCAAAAGCCAAACAACATTAATTTCACGGTCGGTGATTTAAACGCTGTCAATTCAA
AGAAAGAAGTCCCACCTTCCCAATCTAACTCAACCAAGAAGTTAAAACACGAAGGCAAAA
GAAGGGTTGACGACGAAATGTCTCAATCCGTTCCAACTCGCTTGCAAAATGATGGCGTTA
AATTGACCAGTGACAACAAAAGTAAACTTCTATCATCCAGAAAGACGCCTAAGCTGTCGA
AGACGCTATTTCCTTTCATGCGTAAAAACCGCAAGCGCCAGAACAACATGGCAGAAAACG
CCACAGGAAAACCGATGAAGGCGAAAGGGACAATCAACAACAAGAATGCATCAGATTCAG
CAACCAATAAGATTAGTAAGAAAGACAATGGAAATAACATTTCGGCCGAGCCTTCCAAAT
CTCACTTAACTAACACAAATACTTCCTTTCCACAAAAAGACGGAATGGGTTCCGTAGGAT
TTCGTAAACTAAAGATAACTTCACAGCAAAATGATAGGAACGTACACGCTGATTACGCTA
CACGAGTTACAAGGGTACGACGCCGGTCATCCAATGATTCGGAAGACAAAAGATCCCGGG
AAGAATCTGAAGGGAATAGAAAACCATACGAAAAAGTTATACTGCGCGAAAAACCTCGTC
CGAGGCGTCAAACTTCTCGGAGAAGTACGGAAGACATTTCCAAGTCAGCCACTTCAACGG
ATGACGTACTTCTCTTACGTCATAGTTTAAATGACCCCGAACTATTCCTCCAATCTGACC
CGACCTCCAGTCAAGGAAACTTCACCTTCGAAAAGGTTCACGATTCCGTTCAAAGTGATG
GTTTCAAGCTTCGTAACCACAGCGTCGCTCAAACAGAAGGCTTAGACCAGCAGACTCACC
AACAAGTGATAAACAGATGCTCTCTCAACATTGATTACCTCCGCTCATCTAACTACCTGG
ACCGTATGAGTTTCATCAGGTCAATCCCTGGCCCGGAAACTACACTCAACGGGAGCATAT
GTGGAAGCATGACAGGGATAAGTACTCCCTGCTCATCTATCCTCACCATAGGGATCGGAA
CAGCTGCGAGATGCAGCCTCGCATCCAGCTACGCGTCAGTGTTTGAAGATGACAGGAACA
TTTCGGATGTTCGAAACGTGTCATGTGAGATTGGCGATCCGGAGGCGAGAGCTGACTCTT
TTGTGAAACCGGACCCACCAAAGCAGCTCCGAAGAGCAAAATCCTTATACAACCCGCCGA
ACTTACAGTTGCGCCAGTTCAACCGTAGATCTGTATCCCCAACCTTACAAGATGATCTTT
TTGAATCGATGAAATTGAAAACATCCAATCCAGAAAACTTTCGCACAACAGCCAGACCAC
CCCAACCAAACAAACCAACCACCCCAAAACCTCGGAAAATGAGCGCCAGTGGAAGTTGTT
CATCTCTTAATATGTTTAATTTCCGATTATCCCAGCAGAACATTTGCAACACAAATGAAC
CAGTGGCAATATGTCGACCCGCATCGTACCAATATAACCAAGAAATAGTTGCGGATTCGG
GGGAACCCCGCAGCAAAATCTCTGCCAAGAACTCCTCCATCCGAAGGCGAATGTCACTTC
AACTCTTAAAACCAACCAACCGTGACATGAAAGCAATTCCAATCGTATCACAGTTAAACG
ACGAATACAAGCGTCACTCAATCGCTGGTTTAGACGCCGAAAAGGTTAAGACAGCCATGA
CAAGATGGAGCGCTATCAGCAACAACATGTCCTCTTCAAATAGAAGTTCACGTCGAAGAA
TTCGTCCATTATCCGAGGTTCAAAACTTCAGATGGGATGTTCAAGCCATTCCCGAGCATA
ACGAAATAACAAGTCCATGCAATGAAGAAATAATCTCCAAACTACCGTCCACTCTTCCGC
GACCGAAAACTAAACCAGACTCCGCTACGCCAACAAGCGGAAATGGGTGTGTCCGCAAGG
TGCCACCAAAGACGAAAAAAGTTTCGATTTCTGAAGTGAACTCGACTTACGAAGCAAACG
ACTTTGAGATATTACCTCGTCTATCATTCATTGGATCTAGTTTTAGCCAAGAAGAACTTT
CTTCTCGAACACCATTTGACCAGGAAATTTTGGTTGAAACTTGCCACCTTCGTAAAGCAT
TATCCGTTATTGGTGGAATTAACACGATGCCAGATAGCTTACTGCACTTTTATCCTACTA
AGTATTACAACGAAATTGGCAATCGAACGTTCCACTCATACTATGGTGTTCGAGGGCAGC
AAGTTCACGATGAAAGATGTCGAATCCAAGGAAGCATGTCTGGTATTTCGACCGAATCGG
GTTACGGGACCATGACAAGGAATGGAACACGCTTGAGAACTCCTGATAATGAAGAGGACG
CGGTGTTTGTGAACTCAAATTCGAACCAACTGGGTGGCGGAACTTCAGCTCAGCAGACAA
ATGGAGTCTTCGTGGAAGCATTGTGGGATCACGTGACCATGGACCCTGATGAGCTTGGAT
TTAAAGTTGGTGACGTCATACGTGTAAATGACATGTCGAATGCTGATTGGTGGTGGGGGG
AACTCGATTCTGTGGAAGGGTGGTTTCCCGCTACCTTTGTTAGGATTCTCGTCAACCAGC
AAATCCGTACAGATTCAAACAATAGTGACATCATTGTTTCGTCATACGCAAGCTCACAAA
GCGAGGACGAAATCTCAGTGACGTCACACGAGTTTTCACGCGTGACGTCATTTAACGACA
TTTGCCAATGCACAGAGCAACGTTCGACGACATCCATTCATTGCAATGTTTGCGGGAGAC
CACTGACCGATGCGACGCCAGCCAGCAGGGCGTCGATCGCCAACCAAACCAAACAGCCAG
AGATTGTAATAACGAAACCTCCTTCCAACGCCCGCAAAGCTTCCATTACACGAGACCAAA
TTCGTGCAAACGTCATCAAAGAAATAGTCAATTCCGAAAAAGTATTTGTCGGTCACCTCA
AAGACGTAGTACAGGGCTACCTGACTCGTTGCCGAAACCGCTCCGACATGTTTACAGACG
AAGAACTCAACACTTTGTTTGGAAACATAGAAGACATCTATCTGTTCCAACGGGACTTCG
CTGCCGAGCTTGAGGCGTCAGTCGATTCGTCCTCAGTACACACAACCGAACTAGGAAATG
TTTTTCTAAAACACAAAGACGGCTTCTGCATATACTCGGAATATTGTAACAACCATCCAC
AAGCACTAGCGGAGTTGGCACATTTGTTGACCTTCAAAAAATACGTTCATTTTTTCGAAG
CTTGTCGATTATTACAAAAAATGATTGACATTCCATTAGATGGATTCCTTTTAACTCCTG
TCCAGAAAATCTGCAAATACCCGTTGCAGTTGGCGGAACTTTTAAAGTACACTCACCCCG
AGCACCAGGATTACGATGCCGTTAAATCTGCATTAGAAGCAATGAAGGGCGTTGCCCACA
TGATCAATGAACGTAAAAGAAAGATGGAAAACGTGAGAAAGATATCTCAGTGGCAAGCAA
GCATCGTCAATTGGCAGGGTGAGAGCGTGCTTTCCAGGAGTAGTGAGTTGGTACATTCCG
GGGAGGTATATGCGTTGTCGCAAGTTAAATCTAAACCCAAATCACGAGTCGCTTTCTTGT
TTGATCATCAAATGATTCTCTGCAAAAAGGATTTGCTTCGTCGCGATCTCCTATATTACA
AAGCTCGCATCGACTTGGACGCTGTTGAAGTGAGTGCCACCGAACCAGACTCACCTAAAT
CCTCACATTCCGGGAATGACTGGCATTCATCGTCAAGTTTAGGCTCATGCCAAGGCTGGA
AGGTTACAGACACGACCACTGGCGAGTCCGGTTTAATGTACTGCAAGAATCCAGATGACT
GTGGAAAGTGGATGAAAGCGTTCGCACTTGAAAGAAAAATAGCTGAAACCAAAGCAAGTG
GGACGCCTCTCCCAACCGAAGCATATTCTCTCAGCGTGTTGCAGAACTCCTTGACAGTCT
CCAGAAAGCCAAAAGAGGCGAGTACACAGAGGCTTGCGCCTTCGTATCGATACCGCATAA
AAATGGCACAAGAAGTGCAAGAATTGTCGGCAAAGCAGACCAACTATGGGTCGGAGAAGT
CTGGTTTTTTCAGCAGCGTCGCAGGAAAGCTCACTCCATTCCGTCGCACACATACACGGG
AAAGCAGCTTCGTATTTTAACTTCCAAGGGATTTTAAATTTCACCGCGAACTTATTTGTT
TCACAGTATTTTTGCACACGTTATATTGTACAGTCTCTAGAAAAGACGAAGCCGTGTCGA
ACTTGTGTGCTTCCGCTTTTGTAAATCTGTATAAACAATAGAAGAGAATATTGTAGTCAT
AAAATTGGAGTTCACTTTTAAAGTTATATTTTATTAAAAAGTGAGCCTGAACTGCGTCAA
AGAAAGCAGGGCGCGTTTGCTGTGTGTATTTTACCACCAACTTGTTTTTATTGATTTCCA
CTGTGTTTACCTCACCGCCTATACGTTCCCAGTCGTGTTACTTCGGCTACAGGCCACACG
ACTGTTTTACTTTTATCTAAGAACATTGCTTCTTTTGCACGTGCAATTTTGACTTCGCTC
ACGCCATGCCACGATTTGCTGTTACTCTCCACAATAAACGCCCAAAACTAAATCAAATTG
TATTTTTGGATCAGAAATC
| ProSiteProfiles |
SH3_domain (IPR001452) - T[1099-1158] 14.252 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[1099-1175] 3.81E-20 |
| SMART |
SH3_domain (IPR001452) - T[1102-1157] 9.5E-18 |
| Pfam |
SH3_domain (IPR001452) - T[1106-1153] 8.9E-11 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[1234-1466] 8.0E-80 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[1246-1465] 3.01E-58 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[1260-1444] 32.137 |
| CDD |
DH-domain (IPR000219) - T[1261-1442] 4.98299E-58 |
| SMART |
DH-domain (IPR000219) - T[1264-1443] 2.0E-61 |
| Pfam |
DH-domain (IPR000219) - T[1264-1442] 7.0E-44 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[1392-1417] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1467-1631] 2.9E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[1475-1592] 7.014 |
| SMART |
PH_domain (IPR001849) - T[1476-1594] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 47.454 % | 397 | 4.18E-121 |
| SPT13_HUMAN | 46.37 % | 391 | 1.5E-119 |
| ARHG9_HUMAN | 43.511 % | 428 | 9.67E-135 |