- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C4.435.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.435.v2.A.SL3-1
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
KhC4 [853,275 / 868,885]
Amino acid sequence
Length: 1,979
>KH.C4.435.v2.A.SL3-1
VYCNMVERSALSNGQSMITVKQPLIDVRAWFASSRGPGVFGHGNVTTSMRVPHFDIDQFA
LKANVSAGFNGQCQRRSHYDNTLVQETTALHRRPEVILNSNCRQAATYGPDSSLTEKSTP
APLYKMYYSDPYRAGGGRQNGIIDSGRCGVFSEADNVVTQNTNGLRAGGCPVSLDTRPRD
NTIVAEVQTVTSKGNISTKILTTSHILPPNLHGVNESFDHNGERTQVPGMDHFDGLPIWN
KAQRNDDSVTVKQPADLSAIEQVGNAELRKKSMFEQTFTSAFTSAEPNRSQASHTTIAVA
QSSQVVDHNVETKSGDIVVKQILTSADGSLSHVRRTKGRNSINDINSAEFYSSCPKSDAT
DQVTVIEVTAKECFSNSVCVAEVRRSSSLCRRATTTETQQVLPTNCLHHSQVKTTVVSDQ
ISHEILLNGTNLRGSSQYRVSYSNDFNKPVTSPGITQDYLRPPRCQSSINLQENVDKTTS
FRTKRNSFLCSSQANILKLKLRNSVRNPASEHDPSYRKRLCKSLTNITADDLLSAPCASI
YDSNLDNSQESKSSQSDLLASRMRTNRTELLPEDLQKPNNINFTVGDLNAVNSKKEVPPS
QSNSTKKLKHEGKRRVDDEMSQSVPTRLQNDGVKLTSDNKSKLLSSRKTPKLSKTLFPFM
RKNRKRQNNMAENATGKPMKAKGTINNKNASDSATNKISKKDNGNNISAEPSKSHLTNTN
TSFPQKDGMGSVGFRKLKITSQQNDRNVHADYATRVTRVRRRSSNDSEDKRSREESEGNR
KPYEKVILREKPRPRRQTSRRSTEDISKSATSTDDVLLLRHSLNDPELFLQSDPTSSQGN
FTFEKVHDSVQSDGFKLRNHSVAQTEGLDQQTHQQVINRCSLNIDYLRSSNYLDRMSFIR
SIPGPETTLNGSICGSMTGISTPCSSILTIGIGTAARCSLASSYASVFEDDRNISDVRNV
SCEIGDPEARADSFVKPDPPKQLRRAKSLYNPPNLQLRQFNRRSVSPTLQDDLFESMKLK
TSNPENFRTTARPPQPNKPTTPKPRKMSASGSCSSLNMFNFRLSQQNICNTNEPVAICRP
ASYQYNQEIVADSGEPRSKISAKNSSIRRRMSLQLLKPTNRDMKAIPIVSQLNDEYKRHS
IAGLDAEKVKTAMTRWSAISNNMSSSNRSSRRRIRPLSEVQNFRWDVQAIPEHNEITSPC
NEEIISKLPSTLPRPKTKPDSATPTSGNGCVRKVPPKTKKVSISEVNSTYEANDFEILPR
LSFIGSSFSQEELSSRTPFDQEILVETCHLRKALSVIGGINTMPDSLLHFYPTKYYNEIG
NRTFHSYYGVRGQQVHDERCRIQGSMSGISTESGYGTMTRNGTRLRTPDNEEDAVFVNSN
SNQLGGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMSNADWWWGELDSVEG
WFPATFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFSRVTSFNDICQCTEQ
RSTTSIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARKASITRDQIRANVIK
EIVNSEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDIYLFQRDFAAELEAS
VDSSSVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFKKYVHFFEACRLLQK
MIDIPLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALEAMKGVAHMINERKR
KMENVRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKPKSRVAFLFDHQMIL
CKKDLLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSSLGSCQGWKVTDTTT
GESGLMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSVLQNSLTVSRKPKEA
STQRLAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTPFRRTHTRESSFVF
Nucleotide sequence
Length: 6,453
>KH2012:KH.C4.435.v2.A.SL3-1
GTTGCTTGTCCGTGCCGAGATAATTGTTTGTTAGGTTTATTGCAATATGGTCGAACGTTC
CGCATTGAGCAATGGCCAGTCAATGATTACTGTCAAGCAACCATTGATAGATGTACGTGC
TTGGTTCGCTAGCTCCCGAGGCCCTGGTGTATTCGGCCACGGTAATGTGACCACCAGCAT
GAGAGTCCCTCACTTCGATATCGATCAATTTGCACTCAAAGCTAACGTAAGTGCAGGATT
TAATGGACAATGTCAGCGCAGGTCACACTACGATAACACGCTCGTGCAGGAAACCACAGC
GCTTCATCGGCGACCAGAAGTAATACTAAATAGCAATTGTAGACAAGCCGCTACGTACGG
TCCTGACAGCAGCTTGACCGAGAAAAGTACGCCCGCCCCTCTCTACAAGATGTATTACTC
TGATCCATATCGAGCTGGTGGCGGCAGACAAAACGGAATTATTGACAGCGGCAGGTGTGG
TGTTTTTAGCGAGGCCGACAATGTTGTTACCCAAAACACGAACGGGCTTAGGGCGGGAGG
GTGTCCCGTGTCACTTGACACTCGGCCACGTGACAACACTATTGTTGCAGAGGTGCAAAC
AGTAACTTCGAAAGGGAATATTTCAACAAAGATCCTAACGACGTCACATATTCTTCCTCC
TAACTTACATGGTGTTAATGAAAGTTTCGACCATAATGGGGAGAGAACCCAGGTGCCAGG
AATGGATCATTTCGACGGTCTCCCAATATGGAATAAAGCGCAACGAAACGACGATAGCGT
GACGGTAAAGCAACCAGCAGACCTATCTGCGATCGAGCAAGTGGGAAATGCCGAGTTGAG
GAAAAAAAGTATGTTTGAGCAGACCTTCACTTCAGCGTTCACAAGCGCGGAACCGAATCG
CTCGCAGGCTTCACATACGACCATTGCTGTCGCCCAGTCATCACAGGTAGTCGATCATAA
CGTGGAAACTAAGAGCGGTGATATAGTCGTAAAGCAGATTTTAACGAGCGCCGATGGCTC
TCTCTCCCATGTAAGACGAACGAAGGGTCGCAATTCGATTAACGATATCAATTCCGCTGA
ATTTTATAGCTCCTGCCCGAAGTCTGACGCAACAGACCAAGTGACTGTAATTGAAGTGAC
AGCTAAAGAATGCTTTTCAAACTCGGTGTGCGTGGCCGAAGTGAGAAGAAGTTCGTCATT
GTGTAGGCGAGCGACAACAACAGAAACGCAGCAAGTGCTACCAACAAACTGTCTGCATCA
TAGTCAAGTTAAAACTACAGTAGTCAGCGACCAAATCAGCCATGAGATTTTACTCAATGG
TACAAATCTAAGAGGAAGTTCGCAATATCGGGTTTCCTACTCAAACGATTTCAACAAGCC
AGTAACTAGTCCCGGAATAACTCAGGATTATCTCAGGCCACCTCGCTGCCAGTCGTCGAT
CAATCTGCAGGAGAACGTGGATAAAACCACAAGTTTCCGAACAAAGAGAAACTCGTTCCT
GTGTTCGTCACAAGCCAATATACTCAAGCTTAAACTAAGAAACAGTGTCCGAAATCCTGC
GAGCGAGCACGATCCGTCGTACAGGAAAAGGCTTTGTAAATCCTTAACAAACATTACCGC
CGACGATTTACTTAGTGCTCCATGCGCTTCTATTTATGATTCGAATTTGGATAATTCACA
AGAAAGCAAAAGTTCCCAAAGCGATTTGTTAGCAAGCCGTATGCGGACAAATCGGACGGA
ACTTCTCCCCGAAGACCTGCAAAAGCCAAACAACATTAATTTCACGGTCGGTGATTTAAA
CGCTGTCAATTCAAAGAAAGAAGTCCCACCTTCCCAATCTAACTCAACCAAGAAGTTAAA
ACACGAAGGCAAAAGAAGGGTTGACGACGAAATGTCTCAATCCGTTCCAACTCGCTTGCA
AAATGATGGCGTTAAATTGACCAGTGACAACAAAAGTAAACTTCTATCATCCAGAAAGAC
GCCTAAGCTGTCGAAGACGCTATTTCCTTTCATGCGTAAAAACCGCAAGCGCCAGAACAA
CATGGCAGAAAACGCCACAGGAAAACCGATGAAGGCGAAAGGGACAATCAACAACAAGAA
TGCATCAGATTCAGCAACCAATAAGATTAGTAAGAAAGACAATGGAAATAACATTTCGGC
CGAGCCTTCCAAATCTCACTTAACTAACACAAATACTTCCTTTCCACAAAAAGACGGAAT
GGGTTCCGTAGGATTTCGTAAACTAAAGATAACTTCACAGCAAAATGATAGGAACGTACA
CGCTGATTACGCTACACGAGTTACAAGGGTACGACGCCGGTCATCCAATGATTCGGAAGA
CAAAAGATCCCGGGAAGAATCTGAAGGGAATAGAAAACCATACGAAAAAGTTATACTGCG
CGAAAAACCTCGTCCGAGGCGTCAAACTTCTCGGAGAAGTACGGAAGACATTTCCAAGTC
AGCCACTTCAACGGATGACGTACTTCTCTTACGTCATAGTTTAAATGACCCCGAACTATT
CCTCCAATCTGACCCGACCTCCAGTCAAGGAAACTTCACCTTCGAAAAGGTTCACGATTC
CGTTCAAAGTGATGGTTTCAAGCTTCGTAACCACAGCGTCGCTCAAACAGAAGGCTTAGA
CCAGCAGACTCACCAACAAGTGATAAACAGATGCTCTCTCAACATTGATTACCTCCGCTC
ATCTAACTACCTGGACCGTATGAGTTTCATCAGGTCAATCCCTGGCCCGGAAACTACACT
CAACGGGAGCATATGTGGAAGCATGACAGGGATAAGTACTCCCTGCTCATCTATCCTCAC
CATAGGGATCGGAACAGCTGCGAGATGCAGCCTCGCATCCAGCTACGCGTCAGTGTTTGA
AGATGACAGGAACATTTCGGATGTTCGAAACGTGTCATGTGAGATTGGCGATCCGGAGGC
GAGAGCTGACTCTTTTGTGAAACCGGACCCACCAAAGCAGCTCCGAAGAGCAAAATCCTT
ATACAACCCGCCGAACTTACAGTTGCGCCAGTTCAACCGTAGATCTGTATCCCCAACCTT
ACAAGATGATCTTTTTGAATCGATGAAATTGAAAACATCCAATCCAGAAAACTTTCGCAC
AACAGCCAGACCACCCCAACCAAACAAACCAACCACCCCAAAACCTCGGAAAATGAGCGC
CAGTGGAAGTTGTTCATCTCTTAATATGTTTAATTTCCGATTATCCCAGCAGAACATTTG
CAACACAAATGAACCAGTGGCAATATGTCGACCCGCATCGTACCAATATAACCAAGAAAT
AGTTGCGGATTCGGGGGAACCCCGCAGCAAAATCTCTGCCAAGAACTCCTCCATCCGAAG
GCGAATGTCACTTCAACTCTTAAAACCAACCAACCGTGACATGAAAGCAATTCCAATCGT
ATCACAGTTAAACGACGAATACAAGCGTCACTCAATCGCTGGTTTAGACGCCGAAAAGGT
TAAGACAGCCATGACAAGATGGAGCGCTATCAGCAACAACATGTCCTCTTCAAATAGAAG
TTCACGTCGAAGAATTCGTCCATTATCCGAGGTTCAAAACTTCAGATGGGATGTTCAAGC
CATTCCCGAGCATAACGAAATAACAAGTCCATGCAATGAAGAAATAATCTCCAAACTACC
GTCCACTCTTCCGCGACCGAAAACTAAACCAGACTCCGCTACGCCAACAAGCGGAAATGG
GTGTGTCCGCAAGGTGCCACCAAAGACGAAAAAAGTTTCGATTTCTGAAGTGAACTCGAC
TTACGAAGCAAACGACTTTGAGATATTACCTCGTCTATCATTCATTGGATCTAGTTTTAG
CCAAGAAGAACTTTCTTCTCGAACACCATTTGACCAGGAAATTTTGGTTGAAACTTGCCA
CCTTCGTAAAGCATTATCCGTTATTGGTGGAATTAACACGATGCCAGATAGCTTACTGCA
CTTTTATCCTACTAAGTATTACAACGAAATTGGCAATCGAACGTTCCACTCATACTATGG
TGTTCGAGGGCAGCAAGTTCACGATGAAAGATGTCGAATCCAAGGAAGCATGTCTGGTAT
TTCGACCGAATCGGGTTACGGGACCATGACAAGGAATGGAACACGCTTGAGAACTCCTGA
TAATGAAGAGGACGCGGTGTTTGTGAACTCAAATTCGAACCAACTGGGTGGCGGAACTTC
AGCTCAGCAGACAAATGGAGTCTTCGTGGAAGCATTGTGGGATCACGTGACCATGGACCC
TGATGAGCTTGGATTTAAAGTTGGTGACGTCATACGTGTAAATGACATGTCGAATGCTGA
TTGGTGGTGGGGGGAACTCGATTCTGTGGAAGGGTGGTTTCCCGCTACCTTTGTTAGGAT
TCTCGTCAACCAGCAAATCCGTACAGATTCAAACAATAGTGACATCATTGTTTCGTCATA
CGCAAGCTCACAAAGCGAGGACGAAATCTCAGTGACGTCACACGAGTTTTCACGCGTGAC
GTCATTTAACGACATTTGCCAATGCACAGAGCAACGTTCGACGACATCCATTCATTGCAA
TGTTTGCGGGAGACCACTGACCGATGCGACGCCAGCCAGCAGGGCGTCGATCGCCAACCA
AACCAAACAGCCAGAGATTGTAATAACGAAACCTCCTTCCAACGCCCGCAAAGCTTCCAT
TACACGAGACCAAATTCGTGCAAACGTCATCAAAGAAATAGTCAATTCCGAAAAAGTATT
TGTCGGTCACCTCAAAGACGTAGTACAGGGCTACCTGACTCGTTGCCGAAACCGCTCCGA
CATGTTTACAGACGAAGAACTCAACACTTTGTTTGGAAACATAGAAGACATCTATCTGTT
CCAACGGGACTTCGCTGCCGAGCTTGAGGCGTCAGTCGATTCGTCCTCAGTACACACAAC
CGAACTAGGAAATGTTTTTCTAAAACACAAAGACGGCTTCTGCATATACTCGGAATATTG
TAACAACCATCCACAAGCACTAGCGGAGTTGGCACATTTGTTGACCTTCAAAAAATACGT
TCATTTTTTCGAAGCTTGTCGATTATTACAAAAAATGATTGACATTCCATTAGATGGATT
CCTTTTAACTCCTGTCCAGAAAATCTGCAAATACCCGTTGCAGTTGGCGGAACTTTTAAA
GTACACTCACCCCGAGCACCAGGATTACGATGCCGTTAAATCTGCATTAGAAGCAATGAA
GGGCGTTGCCCACATGATCAATGAACGTAAAAGAAAGATGGAAAACGTGAGAAAGATATC
TCAGTGGCAAGCAAGCATCGTCAATTGGCAGGGTGAGAGCGTGCTTTCCAGGAGTAGTGA
GTTGGTACATTCCGGGGAGGTATATGCGTTGTCGCAAGTTAAATCTAAACCCAAATCACG
AGTCGCTTTCTTGTTTGATCATCAAATGATTCTCTGCAAAAAGGATTTGCTTCGTCGCGA
TCTCCTATATTACAAAGCTCGCATCGACTTGGACGCTGTTGAAGTGAGTGCCACCGAACC
AGACTCACCTAAATCCTCACATTCCGGGAATGACTGGCATTCATCGTCAAGTTTAGGCTC
ATGCCAAGGCTGGAAGGTTACAGACACGACCACTGGCGAGTCCGGTTTAATGTACTGCAA
GAATCCAGATGACTGTGGAAAGTGGATGAAAGCGTTCGCACTTGAAAGAAAAATAGCTGA
AACCAAAGCAAGTGGGACGCCTCTCCCAACCGAAGCATATTCTCTCAGCGTGTTGCAGAA
CTCCTTGACAGTCTCCAGAAAGCCAAAAGAGGCGAGTACACAGAGGCTTGCGCCTTCGTA
TCGATACCGCATAAAAATGGCACAAGAAGTGCAAGAATTGTCGGCAAAGCAGACCAACTA
TGGGTCGGAGAAGTCTGGTTTTTTCAGCAGCGTCGCAGGAAAGCTCACTCCATTCCGTCG
CACACATACACGGGAAAGCAGCTTCGTATTTTAACTTCCAAGGGATTTTAAATTTCACCG
CGAACTTATTTGTTTCACAGTATTTTTGCACACGTTATATTGTACAGTCTCTAGAAAAGA
CGAAGCCGTGTCGAACTTGTGTGCTTCCGCTTTTGTAAATCTGTATAAACAATAGAAGAG
AATATTGTAGTCATAAAATTGGAGTTCACTTTTAAAGTTATATTTTATTAAAAAGTGAGC
CTGAACTGCGTCAAAGAAAGCAGGGCGCGTTTGCTGTGTGTATTTTACCACCAACTTGTT
TTTATTGATTTCCACTGTGTTTACCTCACCGCCTATACGTTCCCAGTCGTGTTACTTCGG
CTACAGGCCACACGACTGTTTTACTTTTATCTAAGAACATTGCTTCTTTTGCACGTGCAA
TTTTGACTTCGCTCACGCCATGCCACGATTTGCTGTTACTCTCCACAATAAACGCCCAAA
ACTAAATCAAATTGTATTTTTGGATCAGAAATC
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[1393-1469] 4.59E-20 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[1393-1452] 14.252 |
| SMART |
SH3_domain (IPR001452) - T[1396-1451] 9.5E-18 |
| Pfam |
SH3_domain (IPR001452) - T[1400-1447] 1.1E-10 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[1528-1760] 1.0E-79 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[1540-1759] 3.79E-58 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[1554-1738] 32.137 |
| CDD |
DH-domain (IPR000219) - T[1555-1736] 2.24738E-58 |
| SMART |
DH-domain (IPR000219) - T[1558-1737] 2.0E-61 |
| Pfam |
DH-domain (IPR000219) - T[1558-1736] 8.7E-44 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[1686-1711] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1761-1925] 3.6E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[1769-1886] 7.014 |
| SMART |
PH_domain (IPR001849) - T[1770-1888] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 47.454 % | 398 | 1.04E-120 |
| SPT13_HUMAN | 46.37 % | 391 | 8.73E-119 |
| ARHG9_HUMAN | 43.511 % | 431 | 1.08E-134 |