- Transcript 'KH2012:KH.C4.435.v1....' >
- Clone 'cima879109' >
- Transcript 'KH2012:KH.C4.435.v3....'
Transcript Model
Transcript Id
KH2012:KH.C4.435.v3.A.SL10-1
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
KhC4 [864,530 / 868,885]
Amino acid sequence
Length: 849
>KH.C4.435.v3.A.SL10-1
FKDTCLHTRKGSIALLFPLSMSAAENPALRGRLARKESNELEARQHTNHNSVFRSWVKRN
KFLSRVVGSARCVSTSTLPSHSKVRATGEVCQSRDLTSMTNPCGLVRHDRKMIRDLVCRR
SFEVRKDKPIAAAGRFTPQCTRAHTTEVQPVLRSRAKSSNIYMDVLPMDDCDYSLDDDDE
DDDVDDVFDVTVIRASTKQLVRSHTHPKQKTKSVSSGCISTESGYGTMTRNGTRLRTPDN
EEDAVFVNSNSNQLGGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMSNADW
WWGELDSVEGWFPATFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFSRVTS
FNDICQCTEQRSTTSIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARKASIT
RDQIRANVIKEIVNSEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDIYLFQ
RDFAAELEASVDSSSVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFKKYVH
FFEACRLLQKMIDIPLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALEAMKG
VAHMINERKRKMENVRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKPKSRV
AFLFDHQMILCKKDLLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSSLGSC
QGWKVTDTTTGESGLMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSVLQNS
LTVSRKPKEASTQRLAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTPFRRT
HTRESSFVF
Nucleotide sequence
Length: 3,226
>KH2012:KH.C4.435.v3.A.SL10-1
TACTTAGTATACAAACAATCGTCTGTTAGGAAGTGTGACGTCAATTTATTGTTGATTGTT
TTGCTTAACTGAAAGCGTGCGGTGAAACTAAGGCTGTTGCTGGCATACCGACCTGAGATT
AATCGATATCTTCCAGTGCGTATTACTGGCTCGTTTTAATAGTTTGTGGGATTTCCTGCT
CAATACAATGAGAGTGATTCAAGGACACTTGTTTGCACACACGTAAAGGCTCAATTGCCC
TTTTGTTTCCACTTTCAATGTCTGCTGCAGAAAACCCAGCACTTCGCGGCCGGTTGGCGC
GGAAAGAATCCAACGAACTTGAAGCAAGGCAACATACGAATCATAACTCTGTATTCAGAT
CGTGGGTCAAAAGAAACAAGTTTCTGTCACGGGTGGTCGGGTCGGCTCGGTGCGTTTCCA
CGTCCACCTTGCCCTCGCATTCAAAAGTTCGAGCGACCGGGGAAGTATGCCAGTCCCGTG
ACCTGACGTCAATGACGAACCCTTGCGGTCTTGTACGCCATGATAGAAAAATGATCCGCG
ATTTAGTTTGCCGTCGTAGCTTTGAAGTTAGAAAGGATAAGCCCATAGCAGCAGCTGGAC
GATTCACGCCTCAATGCACACGAGCACACACTACAGAAGTACAACCTGTACTCCGCAGCC
GAGCTAAATCATCCAACATATATATGGATGTCTTGCCAATGGATGACTGTGATTATTCAC
TTGATGATGACGACGAAGATGATGACGTAGACGATGTATTTGACGTTACAGTTATCCGCG
CGAGTACAAAGCAGTTAGTGAGAAGCCATACGCATCCCAAACAGAAAACTAAATCCGTGT
CCAGTGGCTGTATTTCGACCGAATCGGGTTACGGGACCATGACAAGGAATGGAACACGCT
TGAGAACTCCTGATAATGAAGAGGACGCGGTGTTTGTGAACTCAAATTCGAACCAACTGG
GTGGCGGAACTTCAGCTCAGCAGACAAATGGAGTCTTCGTGGAAGCATTGTGGGATCACG
TGACCATGGACCCTGATGAGCTTGGATTTAAAGTTGGTGACGTCATACGTGTAAATGACA
TGTCGAATGCTGATTGGTGGTGGGGGGAACTCGATTCTGTGGAAGGGTGGTTTCCCGCTA
CCTTTGTTAGGATTCTCGTCAACCAGCAAATCCGTACAGATTCAAACAATAGTGACATCA
TTGTTTCGTCATACGCAAGCTCACAAAGCGAGGACGAAATCTCAGTGACGTCACACGAGT
TTTCACGCGTGACGTCATTTAACGACATTTGCCAATGCACAGAGCAACGTTCGACGACAT
CCATTCATTGCAATGTTTGCGGGAGACCACTGACCGATGCGACGCCAGCCAGCAGGGCGT
CGATCGCCAACCAAACCAAACAGCCAGAGATTGTAATAACGAAACCTCCTTCCAACGCCC
GCAAAGCTTCCATTACACGAGACCAAATTCGTGCAAACGTCATCAAAGAAATAGTCAATT
CCGAAAAAGTATTTGTCGGTCACCTCAAAGACGTAGTACAGGGCTACCTGACTCGTTGCC
GAAACCGCTCCGACATGTTTACAGACGAAGAACTCAACACTTTGTTTGGAAACATAGAAG
ACATCTATCTGTTCCAACGGGACTTCGCTGCCGAGCTTGAGGCGTCAGTCGATTCGTCCT
CAGTACACACAACCGAACTAGGAAATGTTTTTCTAAAACACAAAGACGGCTTCTGCATAT
ACTCGGAATATTGTAACAACCATCCACAAGCACTAGCGGAGTTGGCACATTTGTTGACCT
TCAAAAAATACGTTCATTTTTTCGAAGCTTGTCGATTATTACAAAAAATGATTGACATTC
CATTAGATGGATTCCTTTTAACTCCTGTCCAGAAAATCTGCAAATACCCGTTGCAGTTGG
CGGAACTTTTAAAGTACACTCACCCCGAGCACCAGGATTACGATGCCGTTAAATCTGCAT
TAGAAGCAATGAAGGGCGTTGCCCACATGATCAATGAACGTAAAAGAAAGATGGAAAACG
TGAGAAAGATATCTCAGTGGCAAGCAAGCATCGTCAATTGGCAGGGTGAGAGCGTGCTTT
CCAGGAGTAGTGAGTTGGTACATTCCGGGGAGGTATATGCGTTGTCGCAAGTTAAATCTA
AACCCAAATCACGAGTCGCTTTCTTGTTTGATCATCAAATGATTCTCTGCAAAAAGGATT
TGCTTCGTCGCGATCTCCTATATTACAAAGCTCGCATCGACTTGGACGCTGTTGAAGTGA
GTGCCACCGAACCAGACTCACCTAAATCCTCACATTCCGGGAATGACTGGCATTCATCGT
CAAGTTTAGGCTCATGCCAAGGCTGGAAGGTTACAGACACGACCACTGGCGAGTCCGGTT
TAATGTACTGCAAGAATCCAGATGACTGTGGAAAGTGGATGAAAGCGTTCGCACTTGAAA
GAAAAATAGCTGAAACCAAAGCAAGTGGGACGCCTCTCCCAACCGAAGCATATTCTCTCA
GCGTGTTGCAGAACTCCTTGACAGTCTCCAGAAAGCCAAAAGAGGCGAGTACACAGAGGC
TTGCGCCTTCGTATCGATACCGCATAAAAATGGCACAAGAAGTGCAAGAATTGTCGGCAA
AGCAGACCAACTATGGGTCGGAGAAGTCTGGTTTTTTCAGCAGCGTCGCAGGAAAGCTCA
CTCCATTCCGTCGCACACATACACGGGAAAGCAGCTTCGTATTTTAACTTCCAAGGGATT
TTAAATTTCACCGCGAACTTATTTGTTTCACAGTATTTTTGCACACGTTATATTGTACAG
TCTCTAGAAAAGACGAAGCCGTGTCGAACTTGTGTGCTTCCGCTTTTGTAAATCTGTATA
AACAATAGAAGAGAATATTGTAGTCATAAAATTGGAGTTCACTTTTAAAGTTATATTTTA
TTAAAAAGTGAGCCTGAACTGCGTCAAAGAAAGCAGGGCGCGTTTGCTGTGTGTATTTTA
CCACCAACTTGTTTTTATTGATTTCCACTGTGTTTACCTCACCGCCTATACGTTCCCAGT
CGTGTTACTTCGGCTACAGGCCACACGACTGTTTTACTTTTATCTAAGAACATTGCTTCT
TTTGCACGTGCAATTTTGACTTCGCTCACGCCATGCCACGATTTGCTGTTACTCTCCACA
ATAAACGCCCAAAACTAAATCAAATTGTATTTTTGGATCAGAAATC
| ProSiteProfiles |
SH3_domain (IPR001452) - T[263-322] 14.252 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[263-341] 1.58E-20 |
| SMART |
SH3_domain (IPR001452) - T[266-321] 9.5E-18 |
| Pfam |
SH3_domain (IPR001452) - T[270-317] 4.0E-11 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[398-630] 2.7E-80 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[410-629] 1.01E-58 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[424-608] 32.137 |
| CDD |
DH-domain (IPR000219) - T[425-606] 9.48439E-59 |
| SMART |
DH-domain (IPR000219) - T[428-607] 2.0E-61 |
| Pfam |
DH-domain (IPR000219) - T[428-606] 2.5E-44 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[556-581] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[631-796] 1.1E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[639-756] 7.014 |
| SMART |
PH_domain (IPR001849) - T[640-758] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 47.917 % | 396 | 1.02E-126 |
| SPT13_HUMAN | 46.262 % | 389 | 2.36E-124 |
| ARHG9_HUMAN | 44.402 % | 449 | 9.95E-150 |