- Transcript 'KH2012:KH.C4.435.v1....' >
- Clone 'cima879109' >
- Transcript 'KH2012:KH.C4.435.v3....' >
- Transcript 'KH2012:KH.C4.435.v3....'
Transcript Model
Transcript Id
KH2012:KH.C4.435.v3.A.SL4-1
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
KhC4 [864,527 / 868,885]
Amino acid sequence
Length: 849
>KH.C4.435.v3.A.SL4-1
FKDTCLHTRKGSIALLFPLSMSAAENPALRGRLARKESNELEARQHTNHNSVFRSWVKRN
KFLSRVVGSARCVSTSTLPSHSKVRATGEVCQSRDLTSMTNPCGLVRHDRKMIRDLVCRR
SFEVRKDKPIAAAGRFTPQCTRAHTTEVQPVLRSRAKSSNIYMDVLPMDDCDYSLDDDDE
DDDVDDVFDVTVIRASTKQLVRSHTHPKQKTKSVSSGCISTESGYGTMTRNGTRLRTPDN
EEDAVFVNSNSNQLGGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMSNADW
WWGELDSVEGWFPATFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFSRVTS
FNDICQCTEQRSTTSIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARKASIT
RDQIRANVIKEIVNSEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDIYLFQ
RDFAAELEASVDSSSVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFKKYVH
FFEACRLLQKMIDIPLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALEAMKG
VAHMINERKRKMENVRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKPKSRV
AFLFDHQMILCKKDLLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSSLGSC
QGWKVTDTTTGESGLMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSVLQNS
LTVSRKPKEASTQRLAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTPFRRT
HTRESSFVF
Nucleotide sequence
Length: 3,229
>KH2012:KH.C4.435.v3.A.SL4-1
CAGTACTTAGTATACAAACAATCGTCTGTTAGGAAGTGTGACGTCAATTTATTGTTGATT
GTTTTGCTTAACTGAAAGCGTGCGGTGAAACTAAGGCTGTTGCTGGCATACCGACCTGAG
ATTAATCGATATCTTCCAGTGCGTATTACTGGCTCGTTTTAATAGTTTGTGGGATTTCCT
GCTCAATACAATGAGAGTGATTCAAGGACACTTGTTTGCACACACGTAAAGGCTCAATTG
CCCTTTTGTTTCCACTTTCAATGTCTGCTGCAGAAAACCCAGCACTTCGCGGCCGGTTGG
CGCGGAAAGAATCCAACGAACTTGAAGCAAGGCAACATACGAATCATAACTCTGTATTCA
GATCGTGGGTCAAAAGAAACAAGTTTCTGTCACGGGTGGTCGGGTCGGCTCGGTGCGTTT
CCACGTCCACCTTGCCCTCGCATTCAAAAGTTCGAGCGACCGGGGAAGTATGCCAGTCCC
GTGACCTGACGTCAATGACGAACCCTTGCGGTCTTGTACGCCATGATAGAAAAATGATCC
GCGATTTAGTTTGCCGTCGTAGCTTTGAAGTTAGAAAGGATAAGCCCATAGCAGCAGCTG
GACGATTCACGCCTCAATGCACACGAGCACACACTACAGAAGTACAACCTGTACTCCGCA
GCCGAGCTAAATCATCCAACATATATATGGATGTCTTGCCAATGGATGACTGTGATTATT
CACTTGATGATGACGACGAAGATGATGACGTAGACGATGTATTTGACGTTACAGTTATCC
GCGCGAGTACAAAGCAGTTAGTGAGAAGCCATACGCATCCCAAACAGAAAACTAAATCCG
TGTCCAGTGGCTGTATTTCGACCGAATCGGGTTACGGGACCATGACAAGGAATGGAACAC
GCTTGAGAACTCCTGATAATGAAGAGGACGCGGTGTTTGTGAACTCAAATTCGAACCAAC
TGGGTGGCGGAACTTCAGCTCAGCAGACAAATGGAGTCTTCGTGGAAGCATTGTGGGATC
ACGTGACCATGGACCCTGATGAGCTTGGATTTAAAGTTGGTGACGTCATACGTGTAAATG
ACATGTCGAATGCTGATTGGTGGTGGGGGGAACTCGATTCTGTGGAAGGGTGGTTTCCCG
CTACCTTTGTTAGGATTCTCGTCAACCAGCAAATCCGTACAGATTCAAACAATAGTGACA
TCATTGTTTCGTCATACGCAAGCTCACAAAGCGAGGACGAAATCTCAGTGACGTCACACG
AGTTTTCACGCGTGACGTCATTTAACGACATTTGCCAATGCACAGAGCAACGTTCGACGA
CATCCATTCATTGCAATGTTTGCGGGAGACCACTGACCGATGCGACGCCAGCCAGCAGGG
CGTCGATCGCCAACCAAACCAAACAGCCAGAGATTGTAATAACGAAACCTCCTTCCAACG
CCCGCAAAGCTTCCATTACACGAGACCAAATTCGTGCAAACGTCATCAAAGAAATAGTCA
ATTCCGAAAAAGTATTTGTCGGTCACCTCAAAGACGTAGTACAGGGCTACCTGACTCGTT
GCCGAAACCGCTCCGACATGTTTACAGACGAAGAACTCAACACTTTGTTTGGAAACATAG
AAGACATCTATCTGTTCCAACGGGACTTCGCTGCCGAGCTTGAGGCGTCAGTCGATTCGT
CCTCAGTACACACAACCGAACTAGGAAATGTTTTTCTAAAACACAAAGACGGCTTCTGCA
TATACTCGGAATATTGTAACAACCATCCACAAGCACTAGCGGAGTTGGCACATTTGTTGA
CCTTCAAAAAATACGTTCATTTTTTCGAAGCTTGTCGATTATTACAAAAAATGATTGACA
TTCCATTAGATGGATTCCTTTTAACTCCTGTCCAGAAAATCTGCAAATACCCGTTGCAGT
TGGCGGAACTTTTAAAGTACACTCACCCCGAGCACCAGGATTACGATGCCGTTAAATCTG
CATTAGAAGCAATGAAGGGCGTTGCCCACATGATCAATGAACGTAAAAGAAAGATGGAAA
ACGTGAGAAAGATATCTCAGTGGCAAGCAAGCATCGTCAATTGGCAGGGTGAGAGCGTGC
TTTCCAGGAGTAGTGAGTTGGTACATTCCGGGGAGGTATATGCGTTGTCGCAAGTTAAAT
CTAAACCCAAATCACGAGTCGCTTTCTTGTTTGATCATCAAATGATTCTCTGCAAAAAGG
ATTTGCTTCGTCGCGATCTCCTATATTACAAAGCTCGCATCGACTTGGACGCTGTTGAAG
TGAGTGCCACCGAACCAGACTCACCTAAATCCTCACATTCCGGGAATGACTGGCATTCAT
CGTCAAGTTTAGGCTCATGCCAAGGCTGGAAGGTTACAGACACGACCACTGGCGAGTCCG
GTTTAATGTACTGCAAGAATCCAGATGACTGTGGAAAGTGGATGAAAGCGTTCGCACTTG
AAAGAAAAATAGCTGAAACCAAAGCAAGTGGGACGCCTCTCCCAACCGAAGCATATTCTC
TCAGCGTGTTGCAGAACTCCTTGACAGTCTCCAGAAAGCCAAAAGAGGCGAGTACACAGA
GGCTTGCGCCTTCGTATCGATACCGCATAAAAATGGCACAAGAAGTGCAAGAATTGTCGG
CAAAGCAGACCAACTATGGGTCGGAGAAGTCTGGTTTTTTCAGCAGCGTCGCAGGAAAGC
TCACTCCATTCCGTCGCACACATACACGGGAAAGCAGCTTCGTATTTTAACTTCCAAGGG
ATTTTAAATTTCACCGCGAACTTATTTGTTTCACAGTATTTTTGCACACGTTATATTGTA
CAGTCTCTAGAAAAGACGAAGCCGTGTCGAACTTGTGTGCTTCCGCTTTTGTAAATCTGT
ATAAACAATAGAAGAGAATATTGTAGTCATAAAATTGGAGTTCACTTTTAAAGTTATATT
TTATTAAAAAGTGAGCCTGAACTGCGTCAAAGAAAGCAGGGCGCGTTTGCTGTGTGTATT
TTACCACCAACTTGTTTTTATTGATTTCCACTGTGTTTACCTCACCGCCTATACGTTCCC
AGTCGTGTTACTTCGGCTACAGGCCACACGACTGTTTTACTTTTATCTAAGAACATTGCT
TCTTTTGCACGTGCAATTTTGACTTCGCTCACGCCATGCCACGATTTGCTGTTACTCTCC
ACAATAAACGCCCAAAACTAAATCAAATTGTATTTTTGGATCAGAAATC
| ProSiteProfiles |
SH3_domain (IPR001452) - T[263-322] 14.252 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[263-341] 1.58E-20 |
| SMART |
SH3_domain (IPR001452) - T[266-321] 9.5E-18 |
| Pfam |
SH3_domain (IPR001452) - T[270-317] 4.0E-11 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[398-630] 2.7E-80 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[410-629] 1.01E-58 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[424-608] 32.137 |
| CDD |
DH-domain (IPR000219) - T[425-606] 9.48439E-59 |
| SMART |
DH-domain (IPR000219) - T[428-607] 2.0E-61 |
| Pfam |
DH-domain (IPR000219) - T[428-606] 2.5E-44 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[556-581] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[631-796] 1.1E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[639-756] 7.014 |
| SMART |
PH_domain (IPR001849) - T[640-758] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 47.917 % | 396 | 1.02E-126 |
| SPT13_HUMAN | 46.262 % | 389 | 2.36E-124 |
| ARHG9_HUMAN | 44.402 % | 449 | 9.95E-150 |