- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C10.133.v1...' >
- Transcript 'KH2012:KH.C2.63.v2.A...' >
- EST 'FK176544.1' >
- Transcript 'KH2012:KH.C4.471.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.471.v1.A.SL1-1
Possible name(s)
AKAP1; TDRD1; TDRKH
Gene model
Location
KhC4 [1,435,942 / 1,444,243]
Amino acid sequence
Length: 800
>KH.C4.471.v1.A.SL1-1
KMPNKWQESRVIITATGIPLALLLCWWVYRRSLKGRLEQEKQTKKLNGISGKVKVPLPEN
EDEVCMEQPSLLDAIPDVVTSDEDVAGLIDQKKTSETNSINNNNDQGEVVLEHDLHDQDG
YQHCVEDSKNESENLNLLTKNKNVELTADDRLSLHETESKSINESEEPVSEEVMVVQESS
LEAACVSCDATGDTTQELTICKEVVAPGNIQELINDSNTQLIENIQDSMLTSNDSVVDVK
HDTINSKDSVCPETTTSSLDSIPPTSEESLELENELHNDFVENIPNTVNNVVEVVSDEKE
EDVDSVSYNSLTSSITDDSNDEESVTLLDAVDSSEENSDEEKNLPSEVHSNPMSLGETSS
EVTSVESCSRVDTDKDSLEEGPIYQKKTRNNSENSGTNNSNNNNNNTVGDLKVLESRKGL
MNGNDCKSCHENAGDSKNEGKTNGWKDDEEDENEHKKDDGKRKIKNKQKFVRPSSLSDAE
ERSSNDPDRKFEVFVEFPSERVGLLIGKQGRNINQLKQDSGAEVFVHEAPFREDIQVLQI
CGIQSEVESCVSRIKRRFNDLSLASFDDPSSLSLSPRMSTPTHHASPNYHSPTYNISQLC
LPEGATIDVVVSAIADVDCIFVQQPNHPSFHSFPNLERAMAVCYQEGTSPGLPNPAQVGL
ICVAQQMGTWYRAQIVHCFEDIEELSIRLMDYGGYTTVPAAAAKQIRADFLSLPFQALEC
YLDNISSPTDDNSFCSDSVNRLQELLAHGRFQVRVTGYRSNGIPRIHLFRLHNHKVTLIN
QEMATKGLATWVEPAPFQSN
Nucleotide sequence
Length: 3,765
>KH2012:KH.C4.471.v1.A.SL1-1
GGTTTATGATGCATGTGTCTGTTGTGTAGGCAGTCTGCTGTATATATTGATACTCACAAC
CGTTTGAAAGTGTTTTGGATATTTGCAACATACTGGGCATCAAATTGTTGAAAGATGCCA
AATAAATGGCAGGAATCAAGAGTTATAATAACTGCAACTGGCATACCCCTTGCACTGTTG
CTTTGCTGGTGGGTGTATAGACGTTCACTGAAGGGTCGGTTAGAACAAGAGAAACAAACT
AAAAAACTGAACGGTATATCTGGAAAAGTGAAAGTTCCGCTCCCTGAAAATGAAGATGAG
GTTTGCATGGAGCAGCCAAGTCTTCTGGATGCGATTCCGGATGTTGTTACTAGCGATGAA
GACGTAGCAGGACTGATTGATCAAAAGAAAACTTCAGAGACAAATTCTATAAACAATAAT
AATGATCAGGGTGAAGTGGTTTTGGAACATGACCTACATGATCAGGATGGGTATCAACAT
TGTGTGGAAGATTCAAAGAACGAGTCGGAAAATTTAAATTTATTGACAAAGAATAAGAAT
GTGGAATTAACCGCTGATGATCGATTAAGTTTGCATGAAACAGAATCAAAAAGTATAAAT
GAATCGGAGGAACCTGTAAGTGAGGAAGTGATGGTTGTTCAGGAAAGTAGTTTAGAAGCT
GCATGCGTGTCTTGTGATGCAACTGGTGATACAACACAAGAATTAACAATATGTAAGGAA
GTTGTTGCCCCTGGGAATATACAAGAATTGATTAATGATTCGAACACACAATTAATTGAG
AATATTCAAGATTCTATGTTGACTTCTAATGATTCTGTTGTGGATGTAAAACATGATACA
ATAAATTCAAAAGACTCAGTTTGCCCTGAAACTACCACCTCAAGCCTTGATTCTATACCA
CCAACATCAGAAGAAAGTTTAGAATTAGAAAATGAGCTTCACAACGATTTTGTGGAAAAT
ATTCCAAATACGGTGAATAATGTTGTGGAAGTGGTCAGTGATGAAAAGGAAGAGGATGTT
GATTCTGTGTCCTACAACTCCTTAACGAGCAGCATTACTGATGACTCAAATGATGAAGAG
TCGGTGACTTTATTGGATGCGGTGGATTCTTCAGAAGAAAACAGCGATGAGGAGAAAAAC
CTCCCATCTGAGGTCCATTCTAACCCCATGTCACTAGGTGAAACGAGTAGTGAAGTTACA
TCGGTCGAAAGTTGTAGTCGTGTGGATACTGATAAAGATTCTTTGGAAGAAGGACCTATT
TATCAAAAGAAAACGCGGAATAATTCTGAAAACTCTGGCACAAACAATAGCAACAACAAC
AATAACAACACCGTTGGAGATTTGAAAGTGTTAGAAAGTCGAAAAGGTTTAATGAATGGA
AACGATTGTAAATCTTGTCATGAGAATGCTGGAGATTCTAAAAATGAAGGGAAAACTAAT
GGATGGAAAGATGATGAAGAGGATGAGAATGAACATAAAAAAGATGACGGTAAGAGAAAG
ATAAAGAACAAACAGAAGTTTGTTCGACCAAGTTCACTTTCAGATGCAGAAGAGAGGTCT
TCAAATGATCCTGACAGAAAATTTGAAGTTTTTGTTGAATTTCCTTCTGAAAGAGTTGGT
TTATTGATCGGAAAACAAGGACGAAACATCAACCAGTTGAAACAAGATTCTGGTGCCGAA
GTTTTTGTTCACGAAGCTCCGTTTCGTGAAGATATTCAAGTTCTTCAAATTTGTGGCATC
CAAAGTGAGGTAGAAAGTTGTGTCAGTCGAATAAAACGACGTTTCAATGATTTATCGCTT
GCCTCCTTCGACGACCCATCGAGTCTGTCCCTTTCACCTCGTATGTCGACTCCAACACAC
CACGCCTCACCAAACTACCATTCACCAACCTACAATATCTCACAGCTCTGCTTGCCGGAA
GGAGCAACAATTGATGTGGTTGTATCAGCCATCGCAGACGTGGATTGTATATTCGTTCAA
CAGCCCAACCACCCTTCATTCCACTCCTTCCCTAATTTAGAGCGAGCTATGGCAGTTTGC
TACCAAGAAGGAACAAGCCCTGGTCTCCCTAATCCTGCACAAGTTGGTTTGATTTGTGTG
GCGCAGCAAATGGGCACGTGGTACCGTGCACAGATCGTACACTGTTTTGAAGATATTGAA
GAACTCTCTATCCGGTTAATGGATTATGGTGGTTATACCACTGTTCCTGCTGCTGCTGCT
AAACAGATACGAGCTGACTTTCTGTCGTTACCATTTCAAGCCCTGGAATGTTACCTTGAT
AATATTTCATCCCCCACAGATGACAATTCATTTTGCTCGGATTCTGTCAATCGATTGCAA
GAATTACTCGCGCATGGAAGATTTCAAGTTCGGGTCACAGGTTACCGTAGCAATGGAATT
CCACGTATTCACCTTTTCCGACTTCATAATCACAAGGTTACGCTTATCAACCAAGAAATG
GCCACAAAAGGTTTAGCAACGTGGGTAGAACCTGCACCTTTTCAATCAAACTAAATTAAC
CGCAAAATCAGACAAAATATACGATTCCAGCCCAAATTAGTAAAGAATTGCGCGTCGCAT
AGCAGAAAGCTTTCCCTTAATTTAGTTTGCACACCATGCTTGCCTGGTTCATGCCACAAA
TAGTTCACTATTGTTCCAAATCATAAAGTGAAATGTTCTTTTTGCTGTGAGAATGTATCC
TTAACATCAGAGCTGTAATTTAATGAATATGACTGCGTGTACTGTGTATTACAGTCGGTT
CATGAAAATCAAAATTTTTCACTGTTGCTTTACCATGCGATTAGGTCCCATCCAGCCTGT
TCAGTAGTTTACTGTGAGAAACATCTGTGCATGCAACAACTACCTTGTTTCACTGTATCC
ATATTTAAGCCACCCCACGTAGTTCTATTTCAACTGCTGTGAAAACTATGAAAAAAATCC
CATTGTGCTAAGCATGCTATAATCCTATCTCTTCAAAAAGGTCACTAAAAAGTTGGTATT
GTCAAGCGCTTGTATTTGATTTTTGCACGCTCACTTTGCATTTAGCAGCCATATAAATTA
AAAAATGTTAAAACTATATTTTTCAACAAATTAGCACACATTTGCTACTTCCTATATTTA
CTAGCCAAAAATTTAAATAATGTTGATGTGAAATGTATAAATTAAATTCTGGTTAACAAA
CGCATGGAATTTAATTTCCTTCAAATCTATTTTTCTGTCTTAGTTTTCATTCTCTGTTTC
AAAAACAATGATTATGTTTCGTTTTCGTGCCATTTCGAAATTCCATGTTTAGTTAGCTTA
CCGGTTATTTTTGTTTGTTACCCTTAACCTTCCTGTTTTTAGGCGTGCCAAGCAATTGGT
ATATTTCTGATTTTAGATGCTTTCAATATTAGTTTTTCATTTGCAAGCCAGTAGTTGCAT
CTCCCTACAAAAGTATTCTTAACCAATGTAAAGTAGAATATTATAACCTGAAAATTCGGC
AAGTATACGCTATGGCTATGCAATCAACAGTTCAAGTTTCAGGCATTCAAACAAACCTTG
TATTTTGGAACACTTTCTAATTCTGCAAAACCTACAACAAAATTAGTTCTTGCTTCTCGC
TAGCTGTTGTATACTGTGAATATTTGCATCTACAATTCAGTAACCCCACAATCTCCAGTC
TTTGCTGCTATTCATGACCTGTGCTATTTAATTGCTGTTTTTTTTATTTGTACTATAGGT
TTGTGTTTTTCATTTGTGTGCGAGTGTTAACCAATAAATATCTGG
| PANTHER |
Akap1 (IPR033104) - T[93-796] 1.1E-82 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[486-563] 9.5E-11 |
| SMART |
KH_dom (IPR004087) - T[489-559] 1.6E-8 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[494-555] 2.8E-10 |
| Pfam |
Tudor (IPR002999) - T[602-723] 5.1E-21 |
| Gene3D |
SNase_OB-fold_sf (IPR035437) - T[609-638] 2.4E-27 - T[710-789] 2.4E-27 |
| SMART |
Tudor (IPR002999) - T[654-711] 7.5E-4 |
| ProSiteProfiles |
Tudor (IPR002999) - T[655-713] 12.981 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AKAP1_HUMAN | 31.806 % | 217 | 1.91E-59 |