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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.134.v3....' > 
  2. Clone 'cima818340' > 
  3. Transcript 'KH2012:KH.S423.2.v1....' > 
  4. Transcript 'KH2012:KH.C2.141.v1....' > 
  5. Transcript 'KH2012:KH.C4.479.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.479.v1.A.nonSL3-1

Possible name(s)

COPS7A; EIF3M; VCL

Gene model

KH2012:KH.C4.479

Location

KhC4 [2,952,360 / 2,956,335]

Sequences

Amino acid sequence

Length: 377

>KH.C4.479.v1.A.nonSL3-1
SPINCTMSVPAFIDLSEADQISELQQYFKSKNIEVKEEGVLFNDVKQLIISTAELWKDTE
GKDIEGVVNSILSLLFVIPIDKGCELVDLLCEQLLRGAESGKAPVSLNLLHNLFHGYPTK
TPFLCKVYSTWLKLAKVSRSIHLVPTNLKELSSWLEDWNAGEEGRQNVLRLLYEAQLNCG
RNKEAAETMITLLQSYTEENAGKAREDAIRCITKALADPNTYLFNQLLTLKPVTFLEGEP
LHDLLNIFVSGNIKEYKDFYETNKEFIESIGLSHTSNTRKMQLLTLVDNFGSAREISFDD
IIARLDISEDDVEEFIIDAIQSKLMRGRIDHVNRKVIVSQACQRIFGRAQWESLASRLEQ
WRDNINRVNGKLQTLQV

Nucleotide sequence

Length: 1,377

>KH2012:KH.C4.479.v1.A.nonSL3-1
AATTCAAGACGTTTGTTAGGTTTGTTTTGTTAGATAAATAGGAGTGTAATATCACTTTCC
GACACCAGTTGATCACCAATAAACTGCACAATGAGTGTACCGGCTTTTATTGACCTTTCT
GAAGCCGATCAGATTTCAGAGCTTCAACAATATTTCAAAAGTAAAAACATTGAAGTGAAG
GAAGAAGGGGTTTTGTTCAATGATGTCAAACAACTTATTATTTCGACTGCAGAACTATGG
AAAGACACAGAAGGAAAAGATATCGAAGGAGTGGTAAACAGCATTCTTTCCTTGCTATTT
GTTATTCCAATCGACAAAGGATGTGAGCTTGTGGATCTTTTGTGTGAGCAATTGTTAAGG
GGCGCTGAAAGTGGAAAAGCACCTGTCAGTTTAAACTTATTACATAATCTGTTCCATGGT
TATCCAACAAAAACTCCATTTCTCTGCAAAGTATATTCTACTTGGTTAAAACTTGCCAAA
GTAAGCAGAAGCATTCACCTCGTACCAACAAACTTGAAAGAATTATCTTCATGGTTGGAG
GATTGGAATGCAGGAGAAGAAGGTCGACAGAATGTGCTGAGACTTTTATACGAAGCACAA
TTGAACTGTGGGAGAAACAAGGAAGCTGCTGAAACAATGATCACTTTACTTCAATCTTAT
ACCGAGGAAAATGCTGGAAAAGCAAGAGAAGATGCCATTAGGTGCATAACGAAGGCATTA
GCCGACCCAAACACATACTTGTTCAATCAACTACTTACTTTAAAACCTGTCACATTCTTA
GAAGGTGAACCTTTACATGATCTTCTCAACATCTTTGTGAGTGGAAACATCAAAGAATAC
AAAGATTTCTATGAAACAAACAAAGAATTTATTGAATCTATAGGTTTGTCCCACACAAGC
AACACAAGGAAAATGCAACTTCTAACATTGGTCGATAACTTCGGTTCAGCAAGAGAAATA
AGTTTTGATGACATCATAGCACGACTTGACATATCTGAAGATGACGTTGAAGAATTCATA
ATTGATGCCATTCAAAGCAAACTTATGAGAGGAAGGATAGACCATGTCAACCGTAAAGTG
ATTGTCAGTCAAGCATGCCAGCGTATATTTGGACGCGCTCAGTGGGAATCCCTCGCCTCC
CGTCTTGAGCAGTGGAGAGATAATATCAACCGAGTTAACGGCAAACTACAAACATTACAA
GTTTAAAATAGATCTTAAGAATTACGTTTTGTTATTATAGTGCGAATATTTGCGTTTTGC
GTGAAAAGAAATAAGAATGTCTGGTGACATAAGTAATTATTGGATTATGTCGGATTTTTG
ATGCGAATTTATGTGGTGTTCCAATCATCTTATGCTAGAAATAAAGATGCAAACCCA

InterProScan

Hamap
eIF3m (IPR027528) - T[7-377] 21.868
Pfam
PCI_dom (IPR000717) - T[240-339] 3.5E-16
SMART
PCI_dom (IPR000717) - T[272-361] 4.6E-14
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[281-340] 1.07E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 46.237 % 345 2.68E-117