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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L134.4.v2....' > 
  2. Transcript 'Moocci.CG.ELv1_2.S34...' > 
  3. Transcript 'KH2012:KH.L4.55.v1.A...' > 
  4. Transcript 'KH2012:KH.L4.55.v1.A...' > 
  5. Transcript 'KH2012:KH.C4.479.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.479.v1.A.SL12-1

Possible name(s)

COPS7A; EIF3M; VCL

Gene model

KH2012:KH.C4.479

Location

KhC4 [2,952,393 / 2,956,335]

Sequences

Amino acid sequence

Length: 377

>KH.C4.479.v1.A.SL12-1
SPINCTMSVPAFIDLSEADQISELQQYFKSKNIEVKEEGVLFNDVKQLIISTAELWKDTE
GKDIEGVVNSILSLLFVIPIDKGCELVDLLCEQLLRGAESGKAPVSLNLLHNLFHGYPTK
TPFLCKVYSTWLKLAKVSRSIHLVPTNLKELSSWLEDWNAGEEGRQNVLRLLYEAQLNCG
RNKEAAETMITLLQSYTEENAGKAREDAIRCITKALADPNTYLFNQLLTLKPVTFLEGEP
LHDLLNIFVSGNIKEYKDFYETNKEFIESIGLSHTSNTRKMQLLTLVDNFGSAREISFDD
IIARLDISEDDVEEFIIDAIQSKLMRGRIDHVNRKVIVSQACQRIFGRAQWESLASRLEQ
WRDNINRVNGKLQTLQV

Nucleotide sequence

Length: 1,344

>KH2012:KH.C4.479.v1.A.SL12-1
ATAAATAGGAGTGTAATATCACTTTCCGACACCAGTTGATCACCAATAAACTGCACAATG
AGTGTACCGGCTTTTATTGACCTTTCTGAAGCCGATCAGATTTCAGAGCTTCAACAATAT
TTCAAAAGTAAAAACATTGAAGTGAAGGAAGAAGGGGTTTTGTTCAATGATGTCAAACAA
CTTATTATTTCGACTGCAGAACTATGGAAAGACACAGAAGGAAAAGATATCGAAGGAGTG
GTAAACAGCATTCTTTCCTTGCTATTTGTTATTCCAATCGACAAAGGATGTGAGCTTGTG
GATCTTTTGTGTGAGCAATTGTTAAGGGGCGCTGAAAGTGGAAAAGCACCTGTCAGTTTA
AACTTATTACATAATCTGTTCCATGGTTATCCAACAAAAACTCCATTTCTCTGCAAAGTA
TATTCTACTTGGTTAAAACTTGCCAAAGTAAGCAGAAGCATTCACCTCGTACCAACAAAC
TTGAAAGAATTATCTTCATGGTTGGAGGATTGGAATGCAGGAGAAGAAGGTCGACAGAAT
GTGCTGAGACTTTTATACGAAGCACAATTGAACTGTGGGAGAAACAAGGAAGCTGCTGAA
ACAATGATCACTTTACTTCAATCTTATACCGAGGAAAATGCTGGAAAAGCAAGAGAAGAT
GCCATTAGGTGCATAACGAAGGCATTAGCCGACCCAAACACATACTTGTTCAATCAACTA
CTTACTTTAAAACCTGTCACATTCTTAGAAGGTGAACCTTTACATGATCTTCTCAACATC
TTTGTGAGTGGAAACATCAAAGAATACAAAGATTTCTATGAAACAAACAAAGAATTTATT
GAATCTATAGGTTTGTCCCACACAAGCAACACAAGGAAAATGCAACTTCTAACATTGGTC
GATAACTTCGGTTCAGCAAGAGAAATAAGTTTTGATGACATCATAGCACGACTTGACATA
TCTGAAGATGACGTTGAAGAATTCATAATTGATGCCATTCAAAGCAAACTTATGAGAGGA
AGGATAGACCATGTCAACCGTAAAGTGATTGTCAGTCAAGCATGCCAGCGTATATTTGGA
CGCGCTCAGTGGGAATCCCTCGCCTCCCGTCTTGAGCAGTGGAGAGATAATATCAACCGA
GTTAACGGCAAACTACAAACATTACAAGTTTAAAATAGATCTTAAGAATTACGTTTTGTT
ATTATAGTGCGAATATTTGCGTTTTGCGTGAAAAGAAATAAGAATGTCTGGTGACATAAG
TAATTATTGGATTATGTCGGATTTTTGATGCGAATTTATGTGGTGTTCCAATCATCTTAT
GCTAGAAATAAAGATGCAAACCCA

InterProScan

Hamap
eIF3m (IPR027528) - T[7-377] 21.868
Pfam
PCI_dom (IPR000717) - T[240-339] 3.5E-16
SMART
PCI_dom (IPR000717) - T[272-361] 4.6E-14
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[281-340] 1.07E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 46.237 % 345 2.68E-117