Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 564

>KH.C4.510.v1.A.ND1-1
SYVAPVTTLVRCYSCFDASSRDQCMDYVECQPGSSGCLNEIRRRTPNSAFGLSRPSMYRA
TLKCKQVNACNVGELQDLSQQCNPASGRRDNPPKVCRCCCEGDLCNGPGTNCGHLLGWLD
PLRDPAPATPPMPVFCPDRSSLRNGLVTCTQGAEVGSTCSFSCNPGTYMVGVGSTTCFAG
GQWSGDAPTCVRLDPCPVIPEREGMTTSCTNLNQAHSTCRFNCIPGFLLAGAPVLRCSTT
ATWDRSFPVCIQADDCRPNPCQNNAVCRDLTNDFECECVAGFTGKRCDQEGFSTWSSQPP
CCDLKCPPHALVDLMFLLDSSSSVGRSNWNLLINFTVALLDKFVISPDDMRVGVARFNRH
FDRDSEILIGNYSNISELRQKLRRMPYRGRGTLTGNALWHMNNHSLHAPGNRPGVPDVIV
VITDGLASDEVLRAANALKEQDVKMYVVGLINRMNRMNLAQLQDISSGTEYLQIIDNGYE
RLADELSDTLTQDVCWLPCQFKYQQREIILRNRQRAAMKQDREDEDFWARVDATGSIEEA
VAQTRAPRGGKDQESPLLLRRCRE

Nucleotide sequence

Length: 2,176

>KH2012:KH.C4.510.v1.A.ND1-1
CAAGTTACGTGGCCCCGGTCACAACACTCGTACGATGCTATAGTTGTTTCGATGCTTCAT
CACGTGACCAGTGCATGGACTACGTTGAATGCCAACCAGGCTCAAGTGGTTGCTTGAACG
AAATTCGAAGGCGAACACCGAACTCAGCGTTTGGTTTATCCCGACCAAGCATGTACCGAG
CGACGCTCAAATGCAAGCAAGTAAACGCTTGCAACGTCGGCGAACTCCAGGATTTGTCGC
AGCAGTGCAACCCGGCAAGTGGACGAAGGGACAACCCACCCAAAGTATGCAGATGTTGTT
GTGAGGGAGATTTATGCAACGGTCCAGGAACCAACTGCGGTCATTTATTGGGCTGGTTGG
ATCCACTTCGTGATCCTGCACCAGCTACACCACCTATGCCAGTTTTTTGCCCCGATCGAA
GCAGTTTAAGGAACGGTTTGGTAACTTGCACACAAGGCGCAGAAGTTGGATCGACATGTA
GTTTCTCTTGCAACCCTGGTACTTACATGGTCGGTGTGGGATCCACCACTTGTTTTGCTG
GTGGACAGTGGAGTGGTGATGCACCAACTTGCGTGAGACTGGACCCTTGCCCAGTGATAC
CAGAGAGAGAAGGAATGACAACTTCATGTACCAACTTAAACCAAGCACACTCCACATGCC
GGTTTAACTGCATACCAGGCTTCTTGTTAGCTGGTGCTCCAGTACTCAGGTGCTCAACTA
CTGCGACATGGGATCGATCCTTCCCAGTGTGCATACAAGCAGATGACTGTAGACCCAACC
CATGCCAAAACAACGCGGTTTGTCGAGATTTGACCAACGACTTCGAATGTGAATGCGTTG
CTGGATTTACCGGCAAACGATGCGACCAAGAAGGTTTTTCGACCTGGTCTTCTCAGCCGC
CATGTTGCGACCTTAAGTGCCCACCTCATGCGCTTGTCGACCTGATGTTCCTCCTTGACT
CTTCCTCTTCTGTTGGACGATCAAACTGGAATCTTCTCATCAACTTCACAGTTGCTTTGT
TGGATAAATTCGTGATCAGTCCTGACGACATGCGAGTAGGCGTGGCAAGGTTCAATCGTC
ACTTCGACCGAGATAGCGAAATTCTTATCGGCAATTATTCCAATATTAGTGAACTGAGAC
AAAAACTACGTCGAATGCCTTACAGAGGAAGAGGCACATTGACTGGTAACGCGTTATGGC
ACATGAACAACCACAGTCTACACGCCCCAGGTAACCGACCTGGTGTTCCTGATGTCATTG
TAGTGATCACTGATGGTTTGGCATCTGATGAAGTGCTCAGAGCTGCGAACGCACTCAAGG
AACAAGATGTAAAGATGTACGTGGTCGGACTGATTAACAGAATGAACCGAATGAATTTAG
CCCAACTTCAAGATATTTCTTCCGGCACCGAATATTTACAAATTATCGATAACGGTTATG
AAAGGCTGGCAGATGAACTTAGTGACACTTTAACACAGGATGTATGTTGGTTGCCTTGCC
AGTTTAAATATCAGCAAAGAGAAATCATTTTACGAAACCGACAACGAGCTGCAATGAAGC
AAGATCGAGAGGACGAAGATTTCTGGGCGAGAGTTGATGCAACTGGAAGCATAGAAGAGG
CTGTGGCACAAACTCGTGCTCCCAGGGGGGGGAAGGATCAGGAGAGCCCGTTGCTCCTCC
GGAGGTGCCGGGAATAGAAAGAGCAACACTGGATGAGTCGAATCCAAGACCTGGGGCGGA
CGGTCCGGTTCGAAAAAACGGTTAAGTTAGAAAACTTTTTCACTTTTACTTTTGAAGCGG
CGTTTACTAAACAGCTTAACCGAAATTAAATCTTAAAACTCTCACGTATAAAACAGCATA
CCTGTTATGTGAACGTCGCTTTGTCCCACGACCTGAATGCCTCGCTTTGTATATTTGGTA
AAGATGTTCCAGTGTTCTATTTAACATTAACTGTATATTTTGTATTTTCGACTGTTAACA
CAGTGATGCCACGTTTATGTTCCGTTTTATTCAATATTTCGCTTCAACTGCATATTTTGT
CTTTTCTTGCATGTTTCCTTTCAGCGTATGTAGTAAATAGTAAGGTAGGATTTTTCTTTT
TCTTTTGCTTATGTGTTATAGTTCCACCGTATAAAAAATCGTCGAAACAGTGTCAAAAAT
AAAAGCATAAATGGTA

InterProScan

SUPERFAMILY	Sushi/SCR/CCP_sf (IPR035976) - T[133-192] 5.98E-14 - T[195-251] 9.17E-10
ProSiteProfiles	Sushi_SCR_CCP_dom (IPR000436) - T[134-192] 9.981 - T[194-252] 9.421
Pfam	Sushi_SCR_CCP_dom (IPR000436) - T[136-190] 2.5E-8 - T[196-250] 9.2E-7
SMART	Sushi_SCR_CCP_dom (IPR000436) - T[136-190] 5.2E-10 - T[196-250] 4.5E-5
CDD	Sushi_SCR_CCP_dom (IPR000436) - T[136-191] 2.46907E-11 - T[196-251] 3.18868E-6
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[252-288] 2.8E-6
ProSiteProfiles	EGF-like_dom (IPR000742) - T[252-288] 20.799
ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[252-276] .
SMART	EGF-like_dom (IPR000742) - T[255-288] 1.9E-6
Pfam	EGF-like_dom (IPR000742) - T[256-286] 3.7E-8
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[267-278] .
ProSitePatterns	EGF-like_CS (IPR013032) - T[276-287] . - T[276-287] .
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[306-497] 1.39E-42
SMART	VWF_A (IPR002035) - T[311-483] 7.2E-28
Gene3D	vWFA_dom_sf (IPR036465) - T[311-507] 8.2E-39
Pfam	VWF_A (IPR002035) - T[313-470] 5.7E-29
ProSiteProfiles	VWF_A (IPR002035) - T[313-490] 24.059