Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.nonSL2-1

Possible name(s)

SLIT2; SLIT3

Gene model

KH2012:KH.C4.515

Location

KhC4 [2,464,879 / 2,468,354]

Sequences

Amino acid sequence

Length: 488

>KH.C4.515.v1.A.nonSL2-1
ICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVECPPE
YKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNIPPP
TLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYYTIS
IPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSLRPA
VDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQPPQN
TVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKSCTS
FYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSVILI
GPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVAIIT
FIYECHKT

Nucleotide sequence

Length: 1,504

>KH2012:KH.C4.515.v1.A.nonSL2-1
AAATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTAAAGACGTAGAGTATTACA
GTTTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGATATGTTTTGCTTGTGT
GCTTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAGTCGAGTGTCCTCCAG
AATATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTGCCGCTCCTATTTCGG
TGTGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTTCGAACAAACATGCAG
AAGGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACATGCAACATACCACCGC
CAACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGGAACGGTTTGTGAGGG
AATATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGAGTTATGATCAGGCAG
TCGTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATGGATATTATACAATAT
CTATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAGAGATGGATTCCAATG
TATTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCGATATCCCGATTCCAG
CAATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGACAAGCTTGCGACCGG
CGGTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAACAAGCAACAGTCGAGC
TGTGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCTTCACAGTGAATGATG
GAGCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAGTGCAACCACCTCAGA
ACACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAAGCGCAGGATCTAATG
ACATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTACGTCGATCAATCTTA
ACGGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGTTCAAATCATGCACAA
GCTTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACACTTCAGCGATGTTCAC
TAGGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTGCTTATCTCGGAGGAT
CCAGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATTCGAGTGTTATCCTTA
TCGGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTTCCGACACGTTTCCAA
ATTCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATGATATCAGCGGAATCA
CGATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTTGTGTTGCGATAATAA
CGTTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGATGGTGAAATGTTCGC
CAGT

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[77-116] 9.767
ProSiteProfiles	ZP_dom (IPR001507) - T[123-385] 11.581
Pfam	ZP_dom (IPR001507) - T[124-378] 4.5E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value