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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.C4.686.v1....'
  4. Transcript 'KH2012:KH.C4.515.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.nonSL5-1

Possible name(s)

SLIT2; SLIT3

Location

KhC4 [2,464,879 / 2,468,362]

Sequences

Amino acid sequence

Length: 491

>KH.C4.515.v1.A.nonSL5-1
PCQICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVEC
PPEYKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNI
PPPTLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYY
TISIPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSL
RPAVDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQP
PQNTVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKS
CTSFYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSV
ILIGPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVA
IITFIYECHKT

Nucleotide sequence

Length: 1,512

>KH2012:KH.C4.515.v1.A.nonSL5-1
GCCTTGTCAAATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTAAAGACGTAGA
GTATTACAGTTTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGATATGTTTT
GCTTGTGTGCTTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAGTCGAGTG
TCCTCCAGAATATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTGCCGCTCC
TATTTCGGTGTGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTTCGAACAA
ACATGCAGAAGGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACATGCAACAT
ACCACCGCCAACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGGAACGGTT
TGTGAGGGAATATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGAGTTATGA
TCAGGCAGTCGTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATGGATATTA
TACAATATCTATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAGAGATGGA
TTCCAATGTATTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCGATATCCC
GATTCCAGCAATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGACAAGCTT
GCGACCGGCGGTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAACAAGCAAC
AGTCGAGCTGTGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCTTCACAGT
GAATGATGGAGCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAGTGCAACC
ACCTCAGAACACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAAGCGCAGG
ATCTAATGACATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTACGTCGAT
CAATCTTAACGGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGTTCAAATC
ATGCACAAGCTTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACACTTCAGCG
ATGTTCACTAGGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTGCTTATCT
CGGAGGATCCAGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATTCGAGTGT
TATCCTTATCGGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTTCCGACAC
GTTTCCAAATTCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATGATATCAG
CGGAATCACGATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTTGTGTTGC
GATAATAACGTTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGATGGTGAA
ATGTTCGCCAGT

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[80-119] 9.767
ProSiteProfiles
ZP_dom (IPR001507) - T[126-388] 11.581
Pfam
ZP_dom (IPR001507) - T[127-381] 4.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value