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  1. Transcript 'KH2012:KH.C4.515.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.nonSL8-1

Possible name(s)

SLIT2; SLIT3

Location

KhC4 [2,464,879 / 2,468,372]

Sequences

Amino acid sequence

Length: 494

>KH.C4.515.v1.A.nonSL8-1
CDLPCQICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFG
VECPPEYKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKT
CNIPPPTLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVN
GYYTISIPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIV
TSLRPAVDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLS
VQPPQNTVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPR
FKSCTSFYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEED
SSVILIGPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILL
CVAIITFIYECHKT

Nucleotide sequence

Length: 1,522

>KH2012:KH.C4.515.v1.A.nonSL8-1
TGTGTGACTTGCCTTGTCAAATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTA
AAGACGTAGAGTATTACAGTTTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTC
GATATGTTTTGCTTGTGTGCTTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCG
GAGTCGAGTGTCCTCCAGAATATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTG
TTGCCGCTCCTATTTCGGTGTGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCG
CTTCGAACAAACATGCAGAAGGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAA
CATGCAACATACCACCGCCAACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTC
CGGAACGGTTTGTGAGGGAATATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGAC
CGAGTTATGATCAGGCAGTCGTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGA
ATGGATATTATACAATATCTATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAA
GAGAGATGGATTCCAATGTATTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTT
TCGATATCCCGATTCCAGCAATAACATGGATCTGTACTTACAACGATCAATATTCTATCG
TGACAAGCTTGCGACCGGCGGTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGC
AACAAGCAACAGTCGAGCTGTGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTC
TCTTCACAGTGAATGATGGAGCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGT
CAGTGCAACCACCTCAGAACACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAG
CAAGCGCAGGATCTAATGACATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTT
CTACGTCGATCAATCTTAACGGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTC
GGTTCAAATCATGCACAAGCTTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCA
CACTTCAGCGATGTTCACTAGGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGT
CTGCTTATCTCGGAGGATCCAGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAG
ATTCGAGTGTTATCCTTATCGGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTT
CTTCCGACACGTTTCCAAATTCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATT
ATGATATCAGCGGAATCACGATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTAC
TTTGTGTTGCGATAATAACGTTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAA
CGATGGTGAAATGTTCGCCAGT

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[83-122] 9.767
ProSiteProfiles
ZP_dom (IPR001507) - T[129-391] 11.581
Pfam
ZP_dom (IPR001507) - T[130-384] 4.6E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value