Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.SL13-1

Possible name(s)

SLIT2; SLIT3

Gene model

KH2012:KH.C4.515

Location

KhC4 [2,464,879 / 2,468,330]

Sequences

Amino acid sequence

Length: 480

>KH.C4.515.v1.A.SL13-1
NCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVECPPEYKCVGNMC
VSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNIPPPTLLCESNT
ITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYYTISIPMPFSAC
QTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSLRPAVDPIRNEL
SGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQPPQNTVVYVKQL
YLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKSCTSFYIHGELS
AADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSVILIGPIYVIEG
EVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVAIITFIYECHKT

Nucleotide sequence

Length: 1,480

>KH2012:KH.C4.515.v1.A.SL13-1
TAAATTGTGATTGTTTTAAAGACGTAGAGTATTACAGTTTCGTCCGAATACACCGAGACA
GCTGTAGAAGAATGTTTCGATATGTTTTGCTTGTGTGCTTGCTGGTGAAGCTTTCTCGAG
CGGAGAAATGCTTTTTCGGAGTCGAGTGTCCTCCAGAATATAAATGTGTCGGCAACATGT
GCGTGAGCCAGTTTTCTGTTGCCGCTCCTATTTCGGTGTGTAGTACCAACCCATGCCAGG
GAGACTGTTCGTGTATCGCTTCGAACAAACATGCAGAAGGTTTCTTTTGCTCGAGTGCGG
CTGGTTACATTGGCAAAACATGCAACATACCACCGCCAACGCTACTTTGCGAAAGCAACA
CTATAACAATTATGATTCCGGAACGGTTTGTGAGGGAATATGACTCCACTCTTTCGAGAA
GTTACTTATACATGGGACCGAGTTATGATCAGGCAGTCGTCAATCCCAATTCCGCATGTG
CAGTAAGAGCGCCGGTGAATGGATATTATACAATATCTATCCCAATGCCATTCTCCGCTT
GTCAGACCAGTTACACAAGAGAGATGGATTCCAATGTATTCACCAACCAGCTTTGGCTCA
ACCAACAAGGAGCTCTTTTCGATATCCCGATTCCAGCAATAACATGGATCTGTACTTACA
ACGATCAATATTCTATCGTGACAAGCTTGCGACCGGCGGTCGACCCGATTCGCAATGAGT
TATCAGGGGTCATTCAGCAACAAGCAACAGTCGAGCTGTGTAAGGTGGGCGGTGCTTGCC
CGAACGCTTGTCCGCCTCTCTTCACAGTGAATGATGGAGCATTGTACACGGTTGCCGAGA
TTATACACGTCACTTTGTCAGTGCAACCACCTCAGAACACGGTTGTGTATGTCAAACAGC
TTTACCTTTCGTGCCAAGCAAGCGCAGGATCTAATGACATCTCACTCGTTACAAACGGCT
GCAGTGCGAACGTGCTTTCTACGTCGATCAATCTTAACGGAATGGGCAATACTGTTTGTT
TATCTTTCCGAGTACCTCGGTTCAAATCATGCACAAGCTTTTACATCCATGGAGAACTTT
CCGCAGCTGATCCAGCCACACTTCAGCGATGTTCACTAGGAAATGGATATGTAAGATCTG
CAGTAACCGGTAATTCGTCTGCTTATCTCGGAGGATCCAGGAAGAAGAGAATGCTTGTTA
AACGCTCCAGCGAAGAAGATTCGAGTGTTATCCTTATCGGACCGATTTATGTCATTGAGG
GAGAAGTAGGACTCGGTTCTTCCGACACGTTTCCAAATTCCTCAGTTGTGACAGTTCTTC
TCGATAACGAAGACCATTATGATATCAGCGGAATCACGATGGCCACTGTGGTCATTGGAG
GATTTGCTTTCATATTACTTTGTGTTGCGATAATAACGTTTATTTATGAATGTCATAAAA
CGTGAAACAAAATAAAAACGATGGTGAAATGTTCGCCAGT

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[69-108] 9.767
ProSiteProfiles	ZP_dom (IPR001507) - T[115-377] 11.581
Pfam	ZP_dom (IPR001507) - T[116-370] 4.3E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value